EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000025318 (Gene tree)
Gene ID: 102227936
Gene Symbol: trmt12
Alias: zgc:153361
Full Name: tRNA methyltransferase 12 homolog
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Minus strand
Length: 8600 bases
Position: chr23:8605097-8613696
Accession: 102227936
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000037575	MTS	PF05175.14	2e-05	1	1
ENSXMAP00000037575	Met_10	PF02475.16	1.9e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000037312	-	4062	XM_005799575	ENSXMAP00000037575	401 (aa)	XP_005799632	UPI0006D92E49

Gene Model

Click here to download ENSXMAG00000025318's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000025318's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000025318	trmt12	96	49.517	ENSG00000183665	TRMT12	92	49.517	Homo_sapiens
ENSXMAG00000025318	trmt12	100	74.442	ENSAPOG00000011979	trmt12	100	74.442	Acanthochromis_polyacanthus
ENSXMAG00000025318	trmt12	96	50.240	ENSAMEG00000019612	TRMT12	92	50.240	Ailuropoda_melanoleuca
ENSXMAG00000025318	trmt12	95	75.196	ENSACIG00000012982	trmt12	99	75.196	Amphilophus_citrinellus
ENSXMAG00000025318	trmt12	100	74.627	ENSAOCG00000020570	trmt12	99	75.853	Amphiprion_ocellaris
ENSXMAG00000025318	trmt12	100	74.378	ENSAPEG00000006335	trmt12	99	75.591	Amphiprion_percula
ENSXMAG00000025318	trmt12	100	72.414	ENSATEG00000018316	trmt12	100	72.414	Anabas_testudineus
ENSXMAG00000025318	trmt12	100	73.515	ENSACLG00000001008	trmt12	100	73.515	Astatotilapia_calliptera
ENSXMAG00000025318	trmt12	99	56.532	ENSAMXG00000040366	trmt12	99	56.532	Astyanax_mexicanus
ENSXMAG00000025318	trmt12	96	49.639	ENSBTAG00000020398	TRMT12	89	49.639	Bos_taurus
ENSXMAG00000025318	trmt12	96	48.077	ENSCJAG00000022174	TRMT12	92	48.077	Callithrix_jacchus
ENSXMAG00000025318	trmt12	96	49.760	ENSCAFG00000001040	TRMT12	94	49.760	Canis_familiaris
ENSXMAG00000025318	trmt12	96	49.760	ENSCAFG00020006500	TRMT12	94	49.760	Canis_lupus_dingo
ENSXMAG00000025318	trmt12	96	49.880	ENSCHIG00000016574	TRMT12	94	49.880	Capra_hircus
ENSXMAG00000025318	trmt12	97	49.272	ENSCPOG00000026520	TRMT12	93	49.272	Cavia_porcellus
ENSXMAG00000025318	trmt12	96	49.760	ENSCSAG00000018615	TRMT12	92	49.760	Chlorocebus_sabaeus
ENSXMAG00000025318	trmt12	97	50.235	ENSCPBG00000014290	TRMT12	93	50.235	Chrysemys_picta_bellii
ENSXMAG00000025318	trmt12	71	47.945	ENSCING00000019633	-	97	47.945	Ciona_intestinalis
ENSXMAG00000025318	trmt12	72	47.619	ENSCSAVG00000000415	-	91	47.619	Ciona_savignyi
ENSXMAG00000025318	trmt12	97	46.929	ENSCGRG00001014834	Trmt12	95	47.420	Cricetulus_griseus_chok1gshd
ENSXMAG00000025318	trmt12	99	65.037	ENSCSEG00000002675	trmt12	95	65.037	Cynoglossus_semilaevis
ENSXMAG00000025318	trmt12	100	78.109	ENSCVAG00000005590	trmt12	100	78.109	Cyprinodon_variegatus
ENSXMAG00000025318	trmt12	99	56.863	ENSDARG00000060338	trmt12	99	56.863	Danio_rerio
ENSXMAG00000025318	trmt12	96	47.585	ENSETEG00000009373	TRMT12	92	47.585	Echinops_telfairi
ENSXMAG00000025318	trmt12	96	50.481	ENSEASG00005022441	TRMT12	94	50.481	Equus_asinus_asinus
ENSXMAG00000025318	trmt12	97	48.193	ENSEEUG00000004844	TRMT12	93	48.193	Erinaceus_europaeus
ENSXMAG00000025318	trmt12	99	62.500	ENSELUG00000004240	trmt12	99	63.369	Esox_lucius
ENSXMAG00000025318	trmt12	66	54.737	ENSFALG00000003825	TRMT12	93	63.415	Ficedula_albicollis
ENSXMAG00000025318	trmt12	96	49.034	ENSFDAG00000016647	TRMT12	94	49.034	Fukomys_damarensis
ENSXMAG00000025318	trmt12	94	70.635	ENSFHEG00000017338	trmt12	97	70.635	Fundulus_heteroclitus
ENSXMAG00000025318	trmt12	81	56.322	ENSGALG00000006773	TRMT12	76	56.322	Gallus_gallus
ENSXMAG00000025318	trmt12	100	94.776	ENSGAFG00000020056	trmt12	100	94.776	Gambusia_affinis
ENSXMAG00000025318	trmt12	96	69.091	ENSGACG00000017351	trmt12	100	69.091	Gasterosteus_aculeatus
ENSXMAG00000025318	trmt12	97	51.179	ENSGAGG00000006032	TRMT12	95	51.179	Gopherus_agassizii
ENSXMAG00000025318	trmt12	100	73.515	ENSHBUG00000016412	trmt12	100	73.515	Haplochromis_burtoni
ENSXMAG00000025318	trmt12	96	48.792	ENSHGLG00000020498	TRMT12	94	48.792	Heterocephalus_glaber_female
ENSXMAG00000025318	trmt12	96	48.792	ENSHGLG00100020132	TRMT12	94	48.792	Heterocephalus_glaber_male
ENSXMAG00000025318	trmt12	100	65.174	ENSHCOG00000005050	trmt12	100	65.174	Hippocampus_comes
ENSXMAG00000025318	trmt12	99	55.122	ENSIPUG00000018011	trmt12	92	55.122	Ictalurus_punctatus
ENSXMAG00000025318	trmt12	97	48.558	ENSSTOG00000030617	TRMT12	94	48.558	Ictidomys_tridecemlineatus
ENSXMAG00000025318	trmt12	99	73.881	ENSKMAG00000000891	trmt12	99	73.881	Kryptolebias_marmoratus
ENSXMAG00000025318	trmt12	53	72.936	ENSLBEG00000017456	-	89	72.936	Labrus_bergylta
ENSXMAG00000025318	trmt12	100	65.517	ENSLBEG00000028712	trmt12	100	65.517	Labrus_bergylta
ENSXMAG00000025318	trmt12	97	51.190	ENSLACG00000015869	TRMT12	94	51.190	Latimeria_chalumnae
ENSXMAG00000025318	trmt12	99	56.373	ENSLOCG00000015290	trmt12	99	56.373	Lepisosteus_oculatus
ENSXMAG00000025318	trmt12	96	50.242	ENSLAFG00000012519	TRMT12	94	50.242	Loxodonta_africana
ENSXMAG00000025318	trmt12	96	49.519	ENSMMUG00000015490	TRMT12	93	49.519	Macaca_mulatta
ENSXMAG00000025318	trmt12	99	70.617	ENSMAMG00000020311	trmt12	99	70.617	Mastacembelus_armatus
ENSXMAG00000025318	trmt12	100	73.762	ENSMZEG00005007349	trmt12	100	73.762	Maylandia_zebra
ENSXMAG00000025318	trmt12	99	51.185	ENSMGAG00000004174	TRMT12	95	51.185	Meleagris_gallopavo
ENSXMAG00000025318	trmt12	99	69.802	ENSMMOG00000000412	trmt12	99	69.802	Mola_mola
ENSXMAG00000025318	trmt12	97	48.522	ENSMODG00000011798	-	84	48.522	Monodelphis_domestica
ENSXMAG00000025318	trmt12	96	50.498	ENSMODG00000021403	-	92	50.498	Monodelphis_domestica
ENSXMAG00000025318	trmt12	100	72.906	ENSMALG00000008668	trmt12	100	72.906	Monopterus_albus
ENSXMAG00000025318	trmt12	96	49.034	MGP_CAROLIEiJ_G0019820	Trmt12	93	49.034	Mus_caroli
ENSXMAG00000025318	trmt12	96	48.910	ENSMUSG00000037085	Trmt12	92	48.910	Mus_musculus
ENSXMAG00000025318	trmt12	96	49.637	MGP_PahariEiJ_G0019829	Trmt12	93	49.637	Mus_pahari
ENSXMAG00000025318	trmt12	96	48.910	MGP_SPRETEiJ_G0020717	Trmt12	92	48.910	Mus_spretus
ENSXMAG00000025318	trmt12	96	49.760	ENSMPUG00000019150	TRMT12	93	49.760	Mustela_putorius_furo
ENSXMAG00000025318	trmt12	96	49.519	ENSMLUG00000003753	TRMT12	94	49.519	Myotis_lucifugus
ENSXMAG00000025318	trmt12	97	47.952	ENSNGAG00000014548	Trmt12	95	47.952	Nannospalax_galili
ENSXMAG00000025318	trmt12	100	74.129	ENSNBRG00000021510	trmt12	100	74.129	Neolamprologus_brichardi
ENSXMAG00000025318	trmt12	96	45.652	ENSOPRG00000008067	TRMT12	92	45.652	Ochotona_princeps
ENSXMAG00000025318	trmt12	96	49.034	ENSODEG00000018933	TRMT12	94	49.034	Octodon_degus
ENSXMAG00000025318	trmt12	100	73.945	ENSONIG00000002614	trmt12	100	73.945	Oreochromis_niloticus
ENSXMAG00000025318	trmt12	96	45.833	ENSOANG00000009987	TRMT12	95	45.833	Ornithorhynchus_anatinus
ENSXMAG00000025318	trmt12	81	54.407	ENSOCUG00000026379	TRMT12	73	54.407	Oryctolagus_cuniculus
ENSXMAG00000025318	trmt12	100	69.403	ENSORLG00000001280	trmt12	100	70.896	Oryzias_latipes
ENSXMAG00000025318	trmt12	100	69.154	ENSORLG00020000708	trmt12	100	70.647	Oryzias_latipes_hni
ENSXMAG00000025318	trmt12	100	70.896	ENSORLG00015012344	trmt12	100	70.896	Oryzias_latipes_hsok
ENSXMAG00000025318	trmt12	100	68.657	ENSOMEG00000015267	trmt12	98	68.657	Oryzias_melastigma
ENSXMAG00000025318	trmt12	97	49.161	ENSOGAG00000015845	TRMT12	94	49.161	Otolemur_garnettii
ENSXMAG00000025318	trmt12	99	57.531	ENSPKIG00000004640	trmt12	99	57.545	Paramormyrops_kingsleyae
ENSXMAG00000025318	trmt12	58	58.148	ENSPSIG00000003476	TRMT12	99	58.148	Pelodiscus_sinensis
ENSXMAG00000025318	trmt12	99	62.624	ENSPMGG00000016356	trmt12	97	62.624	Periophthalmus_magnuspinnatus
ENSXMAG00000025318	trmt12	96	50.249	ENSPCIG00000002967	TRMT12	85	50.249	Phascolarctos_cinereus
ENSXMAG00000025318	trmt12	96	91.667	ENSPFOG00000016931	trmt12	94	91.667	Poecilia_formosa
ENSXMAG00000025318	trmt12	100	90.025	ENSPLAG00000020621	trmt12	100	90.025	Poecilia_latipinna
ENSXMAG00000025318	trmt12	100	93.267	ENSPMEG00000000818	trmt12	100	93.267	Poecilia_mexicana
ENSXMAG00000025318	trmt12	100	90.773	ENSPREG00000011621	trmt12	100	90.773	Poecilia_reticulata
ENSXMAG00000025318	trmt12	96	49.275	ENSPPYG00000018866	TRMT12	92	49.275	Pongo_abelii
ENSXMAG00000025318	trmt12	97	49.279	ENSPCAG00000000556	TRMT12	93	49.279	Procavia_capensis
ENSXMAG00000025318	trmt12	96	49.034	ENSPVAG00000009149	TRMT12	93	49.034	Pteropus_vampyrus
ENSXMAG00000025318	trmt12	95	73.107	ENSPNYG00000010696	trmt12	99	73.107	Pundamilia_nyererei
ENSXMAG00000025318	trmt12	99	54.762	ENSPNAG00000019028	trmt12	99	54.762	Pygocentrus_nattereri
ENSXMAG00000025318	trmt12	96	49.395	ENSRNOG00000008978	Trmt12	94	49.395	Rattus_norvegicus
ENSXMAG00000025318	trmt12	96	49.628	ENSSHAG00000003345	TRMT12	92	49.628	Sarcophilus_harrisii
ENSXMAG00000025318	trmt12	53	30.531	ENSSFOG00015013093	trmt5	51	30.531	Scleropages_formosus
ENSXMAG00000025318	trmt12	99	54.306	ENSSFOG00015006090	trmt12	99	54.306	Scleropages_formosus
ENSXMAG00000025318	trmt12	99	74.257	ENSSMAG00000013247	trmt12	99	74.257	Scophthalmus_maximus
ENSXMAG00000025318	trmt12	100	74.384	ENSSDUG00000006168	trmt12	100	74.384	Seriola_dumerili
ENSXMAG00000025318	trmt12	100	74.384	ENSSLDG00000025007	trmt12	100	74.384	Seriola_lalandi_dorsalis
ENSXMAG00000025318	trmt12	97	50.591	ENSSPUG00000005321	TRMT12	93	50.591	Sphenodon_punctatus
ENSXMAG00000025318	trmt12	100	75.682	ENSSPAG00000009435	trmt12	97	75.682	Stegastes_partitus
ENSXMAG00000025318	trmt12	99	47.031	ENSTGUG00000002280	TRMT12	99	48.317	Taeniopygia_guttata
ENSXMAG00000025318	trmt12	99	66.256	ENSTRUG00000011548	trmt12	99	66.256	Takifugu_rubripes
ENSXMAG00000025318	trmt12	99	64.198	ENSTNIG00000016866	trmt12	99	64.198	Tetraodon_nigroviridis
ENSXMAG00000025318	trmt12	96	49.519	ENSUAMG00000002067	TRMT12	95	49.519	Ursus_americanus
ENSXMAG00000025318	trmt12	96	49.038	ENSVPAG00000006519	TRMT12	93	49.038	Vicugna_pacos
ENSXMAG00000025318	trmt12	96	49.519	ENSVVUG00000016790	TRMT12	93	49.519	Vulpes_vulpes
ENSXMAG00000025318	trmt12	99	49.875	ENSXETG00000009641	trmt12	95	49.875	Xenopus_tropicalis
ENSXMAG00000025318	trmt12	100	98.015	ENSXCOG00000016505	trmt12	100	98.015	Xiphophorus_couchianus