EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000025659 (Gene tree)
Gene ID: -
Gene Symbol: PUS3 (1 of many)
Alias: fj78b12|wu:fj78b12|zgc:56653
Full Name: pseudouridine synthase 3
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Minus strand
Length: 9836 bases
Position: chr10:9235849-9245684
Accession: 25461
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000039994	PseudoU_synth_1	PF01416.20	1.2e-29	1	1
ENSXMAP00000024980	PseudoU_synth_1	PF01416.20	1.4e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000022117	PUS3 (1 of many)-202	1866	-	ENSXMAP00000024980	621 (aa)	-	-
ENSXMAT00000033781	PUS3 (1 of many)-201	1788	-	ENSXMAP00000039994	595 (aa)	-	-

Gene Model

Click here to download ENSXMAG00000025659's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000025659's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000025659	PUS3	52	57.372	ENSG00000110060	PUS3	75	51.908	Homo_sapiens
ENSXMAG00000025659	PUS3	53	85.079	ENSAPOG00000019483	pus3	73	85.079	Acanthochromis_polyacanthus
ENSXMAG00000025659	PUS3	52	56.452	ENSAMEG00000000144	PUS3	68	54.573	Ailuropoda_melanoleuca
ENSXMAG00000025659	PUS3	53	83.810	ENSAOCG00000006589	pus3	65	84.839	Amphiprion_ocellaris
ENSXMAG00000025659	PUS3	53	83.810	ENSAPEG00000014617	pus3	65	84.839	Amphiprion_percula
ENSXMAG00000025659	PUS3	53	83.492	ENSATEG00000022731	pus3	68	83.492	Anabas_testudineus
ENSXMAG00000025659	PUS3	52	59.223	ENSAPLG00000013285	PUS3	72	58.360	Anas_platyrhynchos
ENSXMAG00000025659	PUS3	52	57.643	ENSACAG00000000186	PUS3	68	57.143	Anolis_carolinensis
ENSXMAG00000025659	PUS3	52	57.372	ENSANAG00000035614	PUS3	67	54.848	Aotus_nancymaae
ENSXMAG00000025659	PUS3	53	83.228	ENSACLG00000007356	pus3	68	83.228	Astatotilapia_calliptera
ENSXMAG00000025659	PUS3	52	75.325	ENSAMXG00000019534	pus3	67	72.755	Astyanax_mexicanus
ENSXMAG00000025659	PUS3	52	56.452	ENSBTAG00000014339	PUS3	65	56.151	Bos_taurus
ENSXMAG00000025659	PUS3	55	37.758	WBGene00006473	tag-124	83	37.537	Caenorhabditis_elegans
ENSXMAG00000025659	PUS3	52	57.692	ENSCJAG00000046645	PUS3	67	55.455	Callithrix_jacchus
ENSXMAG00000025659	PUS3	52	55.769	ENSCAFG00000010534	PUS3	68	53.939	Canis_familiaris
ENSXMAG00000025659	PUS3	52	55.769	ENSCAFG00020010659	PUS3	68	53.939	Canis_lupus_dingo
ENSXMAG00000025659	PUS3	52	56.129	ENSCHIG00000012260	PUS3	69	55.034	Capra_hircus
ENSXMAG00000025659	PUS3	52	57.878	ENSTSYG00000014744	PUS3	67	55.927	Carlito_syrichta
ENSXMAG00000025659	PUS3	54	56.522	ENSCAPG00000012231	PUS3	70	54.810	Cavia_aperea
ENSXMAG00000025659	PUS3	54	56.522	ENSCPOG00000032587	PUS3	70	54.810	Cavia_porcellus
ENSXMAG00000025659	PUS3	52	57.372	ENSCCAG00000035999	PUS3	67	55.152	Cebus_capucinus
ENSXMAG00000025659	PUS3	52	57.372	ENSCATG00000043123	PUS3	67	55.152	Cercocebus_atys
ENSXMAG00000025659	PUS3	52	57.878	ENSCLAG00000014947	PUS3	70	54.971	Chinchilla_lanigera
ENSXMAG00000025659	PUS3	52	57.692	ENSCSAG00000002281	PUS3	67	55.891	Chlorocebus_sabaeus
ENSXMAG00000025659	PUS3	52	54.777	ENSCHOG00000008442	PUS3	86	53.012	Choloepus_hoffmanni
ENSXMAG00000025659	PUS3	55	36.034	ENSCING00000009062	-	64	37.500	Ciona_intestinalis
ENSXMAG00000025659	PUS3	51	41.042	ENSCSAVG00000002211	-	69	41.042	Ciona_savignyi
ENSXMAG00000025659	PUS3	52	56.774	ENSCANG00000038729	PUS3	67	54.573	Colobus_angolensis_palliatus
ENSXMAG00000025659	PUS3	52	57.097	ENSCGRG00001019842	Pus3	68	55.183	Cricetulus_griseus_chok1gshd
ENSXMAG00000025659	PUS3	52	56.452	ENSCGRG00000010155	Pus3	68	54.573	Cricetulus_griseus_crigri
ENSXMAG00000025659	PUS3	53	78.730	ENSCSEG00000007948	pus3	70	77.743	Cynoglossus_semilaevis
ENSXMAG00000025659	PUS3	53	87.302	ENSCVAG00000022150	pus3	68	86.520	Cyprinodon_variegatus
ENSXMAG00000025659	PUS3	58	70.402	ENSDARG00000028976	pus3	82	66.667	Danio_rerio
ENSXMAG00000025659	PUS3	52	55.312	ENSDNOG00000040719	PUS3	68	53.254	Dasypus_novemcinctus
ENSXMAG00000025659	PUS3	52	56.913	ENSDORG00000001819	Pus3	70	53.061	Dipodomys_ordii
ENSXMAG00000025659	PUS3	54	42.033	FBgn0034703	CG3045	72	41.444	Drosophila_melanogaster
ENSXMAG00000025659	PUS3	52	49.051	ENSETEG00000013067	PUS3	70	46.377	Echinops_telfairi
ENSXMAG00000025659	PUS3	51	54.822	ENSEBUG00000002154	pus3	52	54.822	Eptatretus_burgeri
ENSXMAG00000025659	PUS3	52	54.984	ENSEASG00005023003	PUS3	68	53.191	Equus_asinus_asinus
ENSXMAG00000025659	PUS3	52	55.627	ENSECAG00000007581	PUS3	68	53.799	Equus_caballus
ENSXMAG00000025659	PUS3	52	56.646	ENSEEUG00000010543	PUS3	70	53.333	Erinaceus_europaeus
ENSXMAG00000025659	PUS3	53	78.481	ENSELUG00000004425	pus3	71	77.500	Esox_lucius
ENSXMAG00000025659	PUS3	52	55.696	ENSFCAG00000005340	PUS3	68	53.892	Felis_catus
ENSXMAG00000025659	PUS3	52	58.491	ENSFALG00000005159	PUS3	65	57.669	Ficedula_albicollis
ENSXMAG00000025659	PUS3	52	57.188	ENSFDAG00000020745	PUS3	70	54.651	Fukomys_damarensis
ENSXMAG00000025659	PUS3	53	90.159	ENSFHEG00000010984	pus3	63	90.159	Fundulus_heteroclitus
ENSXMAG00000025659	PUS3	53	69.325	ENSGMOG00000004534	pus3	79	66.667	Gadus_morhua
ENSXMAG00000025659	PUS3	52	59.236	ENSGALG00000000962	PUS3	69	58.075	Gallus_gallus
ENSXMAG00000025659	PUS3	53	95.556	ENSGAFG00000005615	pus3	68	94.671	Gambusia_affinis
ENSXMAG00000025659	PUS3	52	80.769	ENSGACG00000002125	pus3	68	80.769	Gasterosteus_aculeatus
ENSXMAG00000025659	PUS3	52	58.252	ENSGAGG00000000160	PUS3	64	57.098	Gopherus_agassizii
ENSXMAG00000025659	PUS3	52	56.452	ENSGGOG00000015047	PUS3	67	54.268	Gorilla_gorilla
ENSXMAG00000025659	PUS3	53	82.911	ENSHBUG00000016532	pus3	68	82.911	Haplochromis_burtoni
ENSXMAG00000025659	PUS3	50	51.000	ENSHGLG00000018861	-	71	48.036	Heterocephalus_glaber_female
ENSXMAG00000025659	PUS3	50	53.821	ENSHGLG00000006599	-	69	49.711	Heterocephalus_glaber_female
ENSXMAG00000025659	PUS3	52	56.550	ENSHGLG00000000565	PUS3	70	53.913	Heterocephalus_glaber_female
ENSXMAG00000025659	PUS3	60	42.785	ENSHGLG00100007519	-	89	42.640	Heterocephalus_glaber_male
ENSXMAG00000025659	PUS3	52	54.313	ENSHGLG00100014825	-	66	54.375	Heterocephalus_glaber_male
ENSXMAG00000025659	PUS3	51	50.654	ENSHGLG00100011339	-	75	48.476	Heterocephalus_glaber_male
ENSXMAG00000025659	PUS3	52	81.494	ENSHCOG00000015705	pus3	70	79.747	Hippocampus_comes
ENSXMAG00000025659	PUS3	54	76.161	ENSIPUG00000000105	pus3	67	77.532	Ictalurus_punctatus
ENSXMAG00000025659	PUS3	52	56.913	ENSSTOG00000003721	PUS3	68	54.711	Ictidomys_tridecemlineatus
ENSXMAG00000025659	PUS3	52	57.051	ENSJJAG00000011306	Pus3	68	55.152	Jaculus_jaculus
ENSXMAG00000025659	PUS3	53	86.984	ENSKMAG00000016715	pus3	67	85.893	Kryptolebias_marmoratus
ENSXMAG00000025659	PUS3	53	77.460	ENSLBEG00000004143	pus3	70	76.489	Labrus_bergylta
ENSXMAG00000025659	PUS3	53	57.098	ENSLACG00000011161	PUS3	64	57.098	Latimeria_chalumnae
ENSXMAG00000025659	PUS3	55	72.340	ENSLOCG00000011922	pus3	73	72.673	Lepisosteus_oculatus
ENSXMAG00000025659	PUS3	52	55.238	ENSLAFG00000000535	PUS3	68	53.453	Loxodonta_africana
ENSXMAG00000025659	PUS3	52	57.692	ENSMFAG00000041002	PUS3	68	55.455	Macaca_fascicularis
ENSXMAG00000025659	PUS3	52	57.692	ENSMMUG00000041875	PUS3	68	55.455	Macaca_mulatta
ENSXMAG00000025659	PUS3	52	57.692	ENSMNEG00000045347	PUS3	68	55.455	Macaca_nemestrina
ENSXMAG00000025659	PUS3	52	57.372	ENSMLEG00000029053	PUS3	67	55.152	Mandrillus_leucophaeus
ENSXMAG00000025659	PUS3	54	81.191	ENSMAMG00000016741	pus3	66	82.958	Mastacembelus_armatus
ENSXMAG00000025659	PUS3	53	82.911	ENSMZEG00005015950	pus3	68	82.911	Maylandia_zebra
ENSXMAG00000025659	PUS3	52	58.900	ENSMGAG00000000851	PUS3	81	57.729	Meleagris_gallopavo
ENSXMAG00000025659	PUS3	52	56.774	ENSMAUG00000015873	Pus3	68	54.878	Mesocricetus_auratus
ENSXMAG00000025659	PUS3	52	57.097	ENSMICG00000032941	PUS3	68	54.711	Microcebus_murinus
ENSXMAG00000025659	PUS3	52	56.825	ENSMOCG00000004901	Pus3	70	53.602	Microtus_ochrogaster
ENSXMAG00000025659	PUS3	53	83.121	ENSMMOG00000013909	pus3	71	83.121	Mola_mola
ENSXMAG00000025659	PUS3	52	56.090	ENSMODG00000004222	PUS3	69	56.410	Monodelphis_domestica
ENSXMAG00000025659	PUS3	52	82.692	ENSMALG00000022420	pus3	68	82.692	Monopterus_albus
ENSXMAG00000025659	PUS3	52	56.452	MGP_CAROLIEiJ_G0031957	Pus3	89	54.545	Mus_caroli
ENSXMAG00000025659	PUS3	52	56.129	ENSMUSG00000032103	Pus3	89	54.895	Mus_musculus
ENSXMAG00000025659	PUS3	52	56.731	MGP_PahariEiJ_G0014822	Pus3	85	57.299	Mus_pahari
ENSXMAG00000025659	PUS3	52	56.452	MGP_SPRETEiJ_G0033081	Pus3	89	55.245	Mus_spretus
ENSXMAG00000025659	PUS3	52	56.508	ENSMPUG00000006568	PUS3	67	54.848	Mustela_putorius_furo
ENSXMAG00000025659	PUS3	52	57.235	ENSMLUG00000030636	PUS3	68	55.015	Myotis_lucifugus
ENSXMAG00000025659	PUS3	52	57.235	ENSNGAG00000013868	Pus3	68	55.015	Nannospalax_galili
ENSXMAG00000025659	PUS3	53	82.911	ENSNBRG00000015864	pus3	68	82.911	Neolamprologus_brichardi
ENSXMAG00000025659	PUS3	52	57.051	ENSNLEG00000007460	PUS3	67	54.848	Nomascus_leucogenys
ENSXMAG00000025659	PUS3	52	56.592	ENSOPRG00000007888	-	68	54.407	Ochotona_princeps
ENSXMAG00000025659	PUS3	52	57.692	ENSODEG00000004280	PUS3	70	54.942	Octodon_degus
ENSXMAG00000025659	PUS3	54	83.125	ENSONIG00000016224	pus3	73	83.125	Oreochromis_niloticus
ENSXMAG00000025659	PUS3	52	58.199	ENSOANG00000000406	PUS3	68	57.053	Ornithorhynchus_anatinus
ENSXMAG00000025659	PUS3	52	56.230	ENSOCUG00000004468	PUS3	64	54.079	Oryctolagus_cuniculus
ENSXMAG00000025659	PUS3	53	82.540	ENSORLG00000008445	pus3	68	81.818	Oryzias_latipes
ENSXMAG00000025659	PUS3	53	83.175	ENSORLG00020008847	pus3	68	82.445	Oryzias_latipes_hni
ENSXMAG00000025659	PUS3	53	82.857	ENSORLG00015007438	pus3	68	82.132	Oryzias_latipes_hsok
ENSXMAG00000025659	PUS3	53	83.175	ENSOMEG00000014321	pus3	69	82.445	Oryzias_melastigma
ENSXMAG00000025659	PUS3	52	57.419	ENSOGAG00000008913	PUS3	70	54.252	Otolemur_garnettii
ENSXMAG00000025659	PUS3	52	56.129	ENSOARG00000011870	PUS3	67	54.154	Ovis_aries
ENSXMAG00000025659	PUS3	52	57.051	ENSPPAG00000025809	PUS3	67	54.848	Pan_paniscus
ENSXMAG00000025659	PUS3	52	55.380	ENSPPRG00000005662	PUS3	68	53.593	Panthera_pardus
ENSXMAG00000025659	PUS3	52	55.696	ENSPTIG00000001192	PUS3	68	53.892	Panthera_tigris_altaica
ENSXMAG00000025659	PUS3	52	57.051	ENSPTRG00000004449	PUS3	67	54.848	Pan_troglodytes
ENSXMAG00000025659	PUS3	52	57.372	ENSPANG00000013782	PUS3	67	55.152	Papio_anubis
ENSXMAG00000025659	PUS3	52	76.603	ENSPKIG00000000646	pus3	67	76.849	Paramormyrops_kingsleyae
ENSXMAG00000025659	PUS3	52	58.900	ENSPSIG00000013961	PUS3	64	57.729	Pelodiscus_sinensis
ENSXMAG00000025659	PUS3	54	77.709	ENSPMGG00000000911	pus3	74	77.709	Periophthalmus_magnuspinnatus
ENSXMAG00000025659	PUS3	52	56.913	ENSPEMG00000009602	Pus3	70	53.644	Peromyscus_maniculatus_bairdii
ENSXMAG00000025659	PUS3	52	56.090	ENSPCIG00000010225	PUS3	68	56.090	Phascolarctos_cinereus
ENSXMAG00000025659	PUS3	54	94.410	ENSPFOG00000009447	pus3	75	93.558	Poecilia_formosa
ENSXMAG00000025659	PUS3	53	94.603	ENSPLAG00000023343	pus3	68	93.730	Poecilia_latipinna
ENSXMAG00000025659	PUS3	53	95.238	ENSPMEG00000009870	pus3	68	94.357	Poecilia_mexicana
ENSXMAG00000025659	PUS3	52	57.051	ENSPPYG00000004039	PUS3	67	54.848	Pongo_abelii
ENSXMAG00000025659	PUS3	52	56.270	ENSPCAG00000000441	PUS3	68	54.407	Procavia_capensis
ENSXMAG00000025659	PUS3	52	57.325	ENSPCOG00000019330	PUS3	68	54.955	Propithecus_coquereli
ENSXMAG00000025659	PUS3	52	57.235	ENSPVAG00000002606	PUS3	68	55.623	Pteropus_vampyrus
ENSXMAG00000025659	PUS3	53	83.228	ENSPNYG00000019615	pus3	68	83.228	Pundamilia_nyererei
ENSXMAG00000025659	PUS3	52	77.273	ENSPNAG00000014541	pus3	74	69.613	Pygocentrus_nattereri
ENSXMAG00000025659	PUS3	52	56.452	ENSRNOG00000012994	Pus3	71	53.509	Rattus_norvegicus
ENSXMAG00000025659	PUS3	52	57.372	ENSRBIG00000044456	PUS3	68	55.152	Rhinopithecus_bieti
ENSXMAG00000025659	PUS3	52	57.372	ENSRROG00000035245	PUS3	67	55.152	Rhinopithecus_roxellana
ENSXMAG00000025659	PUS3	52	57.051	ENSSBOG00000022433	PUS3	67	54.848	Saimiri_boliviensis_boliviensis
ENSXMAG00000025659	PUS3	52	55.591	ENSSHAG00000001382	PUS3	69	52.647	Sarcophilus_harrisii
ENSXMAG00000025659	PUS3	52	79.167	ENSSFOG00015004850	pus3	72	78.233	Scleropages_formosus
ENSXMAG00000025659	PUS3	53	83.175	ENSSMAG00000020340	pus3	66	83.175	Scophthalmus_maximus
ENSXMAG00000025659	PUS3	53	84.127	ENSSDUG00000020825	pus3	66	84.127	Seriola_dumerili
ENSXMAG00000025659	PUS3	53	84.762	ENSSLDG00000019932	pus3	66	85.032	Seriola_lalandi_dorsalis
ENSXMAG00000025659	PUS3	52	57.929	ENSSPUG00000001412	PUS3	63	57.929	Sphenodon_punctatus
ENSXMAG00000025659	PUS3	52	86.174	ENSSPAG00000019221	pus3	72	85.397	Stegastes_partitus
ENSXMAG00000025659	PUS3	52	56.774	ENSSSCG00000015222	PUS3	68	54.518	Sus_scrofa
ENSXMAG00000025659	PUS3	52	59.032	ENSTGUG00000000778	-	71	58.491	Taeniopygia_guttata
ENSXMAG00000025659	PUS3	54	78.704	ENSTRUG00000013050	pus3	72	78.704	Takifugu_rubripes
ENSXMAG00000025659	PUS3	55	77.846	ENSTNIG00000004929	PUS3	70	79.180	Tetraodon_nigroviridis
ENSXMAG00000025659	PUS3	55	76.758	ENSTNIG00000010307	pus3	79	76.758	Tetraodon_nigroviridis
ENSXMAG00000025659	PUS3	52	56.731	ENSTBEG00000004382	PUS3	71	54.848	Tupaia_belangeri
ENSXMAG00000025659	PUS3	52	56.913	ENSTTRG00000012167	PUS3	68	55.015	Tursiops_truncatus
ENSXMAG00000025659	PUS3	52	55.806	ENSUAMG00000009297	PUS3	68	53.963	Ursus_americanus
ENSXMAG00000025659	PUS3	52	56.129	ENSUMAG00000001795	PUS3	68	54.268	Ursus_maritimus
ENSXMAG00000025659	PUS3	52	56.913	ENSVPAG00000001495	PUS3	70	54.412	Vicugna_pacos
ENSXMAG00000025659	PUS3	52	55.769	ENSVVUG00000020152	PUS3	68	54.242	Vulpes_vulpes
ENSXMAG00000025659	PUS3	56	54.094	ENSXETG00000024532	pus3	63	54.094	Xenopus_tropicalis
ENSXMAG00000025659	PUS3	55	95.077	ENSXMAG00000028016	pus3	71	96.552	Xiphophorus_maculatus
ENSXMAG00000025659	PUS3	60	98.123	ENSXMAG00000029934	pus3	87	98.123	Xiphophorus_maculatus
ENSXMAG00000025659	PUS3	60	98.387	ENSXMAG00000025077	pus3	87	98.387	Xiphophorus_maculatus