EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000025740 (Gene tree)
Gene ID: 102228428
Gene Symbol: apex2
Alias: zgc:55889
Full Name: apurinic/apyrimidinic endodeoxyribonuclease 2
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 6811 bases
Position: chr1:24367424-24374234
Accession: 102228428
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000024859	Exo_endo_phos	PF03372.23	2.3e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000023030	-	3604	XM_023329601	ENSXMAP00000024859	560 (aa)	XP_023185369	UPI000C6DC473

Gene Model

Click here to download ENSXMAG00000025740's gene model file

Pathways

Pathway ID	Pathway Name	Source
xma03410	Base excision repair	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000025740's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000025740	apex2	99	45.343	ENSG00000169188	APEX2	99	45.167	Homo_sapiens
ENSXMAG00000025740	apex2	100	74.301	ENSAPOG00000005805	apex2	100	74.126	Acanthochromis_polyacanthus
ENSXMAG00000025740	apex2	99	46.046	ENSAMEG00000003608	APEX2	99	45.870	Ailuropoda_melanoleuca
ENSXMAG00000025740	apex2	100	72.300	ENSACIG00000010000	apex2	100	71.951	Amphilophus_citrinellus
ENSXMAG00000025740	apex2	100	74.825	ENSAOCG00000021774	apex2	100	75.000	Amphiprion_ocellaris
ENSXMAG00000025740	apex2	100	74.650	ENSAPEG00000020890	apex2	94	74.825	Amphiprion_percula
ENSXMAG00000025740	apex2	100	71.826	ENSATEG00000023600	apex2	100	71.826	Anabas_testudineus
ENSXMAG00000025740	apex2	99	48.307	ENSACAG00000011201	APEX2	99	48.485	Anolis_carolinensis
ENSXMAG00000025740	apex2	97	39.964	ENSANAG00000020845	-	99	39.785	Aotus_nancymaae
ENSXMAG00000025740	apex2	99	46.235	ENSANAG00000021907	-	99	46.060	Aotus_nancymaae
ENSXMAG00000025740	apex2	100	59.455	ENSAMXG00000007422	apex2	100	59.455	Astyanax_mexicanus
ENSXMAG00000025740	apex2	99	47.469	ENSBTAG00000013177	APEX2	99	47.120	Bos_taurus
ENSXMAG00000025740	apex2	99	45.359	ENSCJAG00000016584	APEX2	99	45.184	Callithrix_jacchus
ENSXMAG00000025740	apex2	99	44.308	ENSCAFG00000014310	APEX2	99	44.133	Canis_familiaris
ENSXMAG00000025740	apex2	99	45.184	ENSCAFG00020013818	APEX2	93	58.036	Canis_lupus_dingo
ENSXMAG00000025740	apex2	99	46.422	ENSCHIG00000019916	APEX2	99	47.295	Capra_hircus
ENSXMAG00000025740	apex2	99	46.221	ENSTSYG00000005612	APEX2	99	45.870	Carlito_syrichta
ENSXMAG00000025740	apex2	99	45.201	ENSCPOG00000007265	APEX2	99	46.073	Cavia_porcellus
ENSXMAG00000025740	apex2	65	52.795	ENSCCAG00000025405	-	96	40.185	Cebus_capucinus
ENSXMAG00000025740	apex2	99	44.834	ENSCATG00000044854	APEX2	99	44.658	Cercocebus_atys
ENSXMAG00000025740	apex2	99	46.261	ENSCLAG00000017315	APEX2	99	46.114	Chinchilla_lanigera
ENSXMAG00000025740	apex2	99	45.534	ENSCSAG00000012124	APEX2	99	45.359	Chlorocebus_sabaeus
ENSXMAG00000025740	apex2	100	46.491	ENSCPBG00000016631	APEX2	99	46.491	Chrysemys_picta_bellii
ENSXMAG00000025740	apex2	82	55.556	ENSCSAVG00000006052	-	93	55.556	Ciona_savignyi
ENSXMAG00000025740	apex2	99	44.640	ENSCANG00000003053	APEX2	99	44.464	Colobus_angolensis_palliatus
ENSXMAG00000025740	apex2	99	45.246	ENSCGRG00001008132	Apex2	99	45.246	Cricetulus_griseus_chok1gshd
ENSXMAG00000025740	apex2	99	45.246	ENSCGRG00000009667	Apex2	85	60.870	Cricetulus_griseus_crigri
ENSXMAG00000025740	apex2	100	68.293	ENSCSEG00000019900	apex2	99	68.293	Cynoglossus_semilaevis
ENSXMAG00000025740	apex2	100	83.217	ENSCVAG00000021583	apex2	100	83.217	Cyprinodon_variegatus
ENSXMAG00000025740	apex2	100	61.340	ENSDARG00000008472	apex2	100	61.340	Danio_rerio
ENSXMAG00000025740	apex2	99	45.167	ENSDNOG00000038901	APEX2	99	45.167	Dasypus_novemcinctus
ENSXMAG00000025740	apex2	78	55.331	ENSEBUG00000015654	apex2	91	55.331	Eptatretus_burgeri
ENSXMAG00000025740	apex2	99	46.573	ENSEASG00005011694	APEX2	90	46.397	Equus_asinus_asinus
ENSXMAG00000025740	apex2	99	46.573	ENSECAG00000026921	APEX2	90	46.397	Equus_caballus
ENSXMAG00000025740	apex2	99	45.518	ENSEEUG00000013172	APEX2	99	45.343	Erinaceus_europaeus
ENSXMAG00000025740	apex2	100	63.203	ENSELUG00000021417	apex2	99	62.862	Esox_lucius
ENSXMAG00000025740	apex2	99	45.343	ENSFCAG00000021990	APEX2	99	45.167	Felis_catus
ENSXMAG00000025740	apex2	99	46.329	ENSFDAG00000008076	APEX2	90	59.906	Fukomys_damarensis
ENSXMAG00000025740	apex2	100	73.913	ENSFHEG00000021411	apex2	99	74.435	Fundulus_heteroclitus
ENSXMAG00000025740	apex2	69	74.359	ENSGMOG00000019681	apex2	100	74.359	Gadus_morhua
ENSXMAG00000025740	apex2	100	96.797	ENSGAFG00000005829	apex2	100	96.797	Gambusia_affinis
ENSXMAG00000025740	apex2	65	88.571	ENSGACG00000012307	apex2	88	88.571	Gasterosteus_aculeatus
ENSXMAG00000025740	apex2	90	44.902	ENSGAGG00000011520	APEX2	88	44.902	Gopherus_agassizii
ENSXMAG00000025740	apex2	99	45.343	ENSGGOG00000002056	APEX2	99	45.167	Gorilla_gorilla
ENSXMAG00000025740	apex2	100	70.979	ENSHBUG00000009938	apex2	100	70.280	Haplochromis_burtoni
ENSXMAG00000025740	apex2	99	46.354	ENSHGLG00000000273	APEX2	98	56.957	Heterocephalus_glaber_female
ENSXMAG00000025740	apex2	100	67.434	ENSHCOG00000010165	apex2	100	67.434	Hippocampus_comes
ENSXMAG00000025740	apex2	100	60.136	ENSIPUG00000000352	APEX2	100	60.307	Ictalurus_punctatus
ENSXMAG00000025740	apex2	99	45.518	ENSSTOG00000025121	APEX2	86	59.906	Ictidomys_tridecemlineatus
ENSXMAG00000025740	apex2	99	46.491	ENSJJAG00000019611	Apex2	93	59.813	Jaculus_jaculus
ENSXMAG00000025740	apex2	100	75.880	ENSKMAG00000006985	apex2	100	75.880	Kryptolebias_marmoratus
ENSXMAG00000025740	apex2	100	73.565	ENSLBEG00000012139	apex2	100	73.565	Labrus_bergylta
ENSXMAG00000025740	apex2	100	50.000	ENSLACG00000000865	APEX2	100	49.828	Latimeria_chalumnae
ENSXMAG00000025740	apex2	100	56.724	ENSLOCG00000014467	apex2	100	57.069	Lepisosteus_oculatus
ENSXMAG00000025740	apex2	99	45.694	ENSLAFG00000018312	APEX2	99	45.518	Loxodonta_africana
ENSXMAG00000025740	apex2	99	44.991	ENSMFAG00000002486	APEX2	99	44.815	Macaca_fascicularis
ENSXMAG00000025740	apex2	99	45.534	ENSMMUG00000008428	APEX2	99	45.359	Macaca_mulatta
ENSXMAG00000025740	apex2	99	45.359	ENSMNEG00000036783	APEX2	99	45.184	Macaca_nemestrina
ENSXMAG00000025740	apex2	99	44.834	ENSMLEG00000028208	APEX2	99	44.658	Mandrillus_leucophaeus
ENSXMAG00000025740	apex2	100	70.103	ENSMAMG00000024220	apex2	100	70.103	Mastacembelus_armatus
ENSXMAG00000025740	apex2	100	70.629	ENSMZEG00005026322	apex2	100	69.930	Maylandia_zebra
ENSXMAG00000025740	apex2	99	44.291	ENSMICG00000043181	APEX2	99	44.118	Microcebus_murinus
ENSXMAG00000025740	apex2	99	45.070	ENSMOCG00000004339	Apex2	91	58.065	Microtus_ochrogaster
ENSXMAG00000025740	apex2	100	70.962	ENSMMOG00000017340	apex2	100	70.790	Mola_mola
ENSXMAG00000025740	apex2	99	50.269	ENSMODG00000005341	APEX2	99	50.269	Monodelphis_domestica
ENSXMAG00000025740	apex2	100	69.983	ENSMALG00000014179	apex2	100	69.983	Monopterus_albus
ENSXMAG00000025740	apex2	99	45.775	MGP_CAROLIEiJ_G0033484	Apex2	100	52.364	Mus_caroli
ENSXMAG00000025740	apex2	99	45.534	ENSMUSG00000025269	Apex2	99	52.364	Mus_musculus
ENSXMAG00000025740	apex2	99	45.599	MGP_PahariEiJ_G0032023	Apex2	92	60.870	Mus_pahari
ENSXMAG00000025740	apex2	99	46.060	MGP_SPRETEiJ_G0034654	Apex2	100	52.364	Mus_spretus
ENSXMAG00000025740	apex2	99	46.221	ENSMPUG00000003293	APEX2	99	46.422	Mustela_putorius_furo
ENSXMAG00000025740	apex2	99	45.070	ENSMLUG00000016298	-	99	44.658	Myotis_lucifugus
ENSXMAG00000025740	apex2	99	44.014	ENSMLUG00000004562	-	99	44.014	Myotis_lucifugus
ENSXMAG00000025740	apex2	99	45.804	ENSNGAG00000013576	Apex2	99	45.804	Nannospalax_galili
ENSXMAG00000025740	apex2	100	71.154	ENSNBRG00000010099	apex2	100	70.455	Neolamprologus_brichardi
ENSXMAG00000025740	apex2	73	54.962	ENSNLEG00000032067	-	91	54.962	Nomascus_leucogenys
ENSXMAG00000025740	apex2	100	72.028	ENSONIG00000016881	apex2	100	71.853	Oreochromis_niloticus
ENSXMAG00000025740	apex2	93	53.714	ENSOANG00000000689	-	96	53.257	Ornithorhynchus_anatinus
ENSXMAG00000025740	apex2	99	39.378	ENSOCUG00000000570	APEX2	99	39.206	Oryctolagus_cuniculus
ENSXMAG00000025740	apex2	100	71.252	ENSORLG00000014053	apex2	100	71.252	Oryzias_latipes
ENSXMAG00000025740	apex2	100	70.351	ENSORLG00020013253	apex2	100	70.370	Oryzias_latipes_hni
ENSXMAG00000025740	apex2	100	70.899	ENSORLG00015007515	apex2	100	70.899	Oryzias_latipes_hsok
ENSXMAG00000025740	apex2	100	70.157	ENSOMEG00000003655	apex2	100	69.634	Oryzias_melastigma
ENSXMAG00000025740	apex2	99	45.660	ENSOGAG00000007797	APEX2	99	45.486	Otolemur_garnettii
ENSXMAG00000025740	apex2	99	46.422	ENSOARG00000005742	APEX2	99	47.295	Ovis_aries
ENSXMAG00000025740	apex2	99	45.518	ENSPPAG00000035747	APEX2	99	45.343	Pan_paniscus
ENSXMAG00000025740	apex2	99	45.518	ENSPPRG00000002440	APEX2	99	45.343	Panthera_pardus
ENSXMAG00000025740	apex2	99	45.343	ENSPTIG00000021651	APEX2	99	45.167	Panthera_tigris_altaica
ENSXMAG00000025740	apex2	99	45.518	ENSPTRG00000021946	APEX2	99	45.343	Pan_troglodytes
ENSXMAG00000025740	apex2	99	44.834	ENSPANG00000003595	APEX2	99	44.658	Papio_anubis
ENSXMAG00000025740	apex2	100	63.212	ENSPKIG00000007752	apex2	100	63.339	Paramormyrops_kingsleyae
ENSXMAG00000025740	apex2	100	66.724	ENSPMGG00000009151	apex2	100	66.782	Periophthalmus_magnuspinnatus
ENSXMAG00000025740	apex2	99	45.599	ENSPEMG00000016475	Apex2	89	57.798	Peromyscus_maniculatus_bairdii
ENSXMAG00000025740	apex2	99	49.462	ENSPCIG00000007633	APEX2	98	50.179	Phascolarctos_cinereus
ENSXMAG00000025740	apex2	100	95.552	ENSPFOG00000000408	apex2	100	95.907	Poecilia_formosa
ENSXMAG00000025740	apex2	100	95.374	ENSPLAG00000023814	apex2	100	95.730	Poecilia_latipinna
ENSXMAG00000025740	apex2	100	95.374	ENSPMEG00000023222	apex2	100	95.730	Poecilia_mexicana
ENSXMAG00000025740	apex2	99	45.518	ENSPPYG00000020388	APEX2	99	45.343	Pongo_abelii
ENSXMAG00000025740	apex2	99	46.516	ENSPCOG00000016083	APEX2	99	46.701	Propithecus_coquereli
ENSXMAG00000025740	apex2	92	45.298	ENSPVAG00000007851	APEX2	99	45.106	Pteropus_vampyrus
ENSXMAG00000025740	apex2	100	70.804	ENSPNYG00000015698	apex2	100	70.105	Pundamilia_nyererei
ENSXMAG00000025740	apex2	100	59.153	ENSPNAG00000011666	apex2	100	59.153	Pygocentrus_nattereri
ENSXMAG00000025740	apex2	99	45.775	ENSRNOG00000000166	Apex2	99	45.599	Rattus_norvegicus
ENSXMAG00000025740	apex2	99	45.343	ENSRBIG00000036500	APEX2	99	45.167	Rhinopithecus_bieti
ENSXMAG00000025740	apex2	99	44.640	ENSRROG00000032674	APEX2	99	44.464	Rhinopithecus_roxellana
ENSXMAG00000025740	apex2	96	38.519	ENSSBOG00000003489	-	96	38.333	Saimiri_boliviensis_boliviensis
ENSXMAG00000025740	apex2	99	44.658	ENSSBOG00000030500	-	99	45.534	Saimiri_boliviensis_boliviensis
ENSXMAG00000025740	apex2	99	51.526	ENSSHAG00000007846	APEX2	99	51.346	Sarcophilus_harrisii
ENSXMAG00000025740	apex2	84	80.000	ENSSFOG00015010354	apex2	100	63.527	Scleropages_formosus
ENSXMAG00000025740	apex2	100	70.833	ENSSMAG00000012753	apex2	100	70.609	Scophthalmus_maximus
ENSXMAG00000025740	apex2	100	72.041	ENSSDUG00000022892	apex2	100	72.041	Seriola_dumerili
ENSXMAG00000025740	apex2	100	72.384	ENSSLDG00000024347	apex2	100	72.384	Seriola_lalandi_dorsalis
ENSXMAG00000025740	apex2	99	45.439	ENSSARG00000010297	APEX2	99	44.912	Sorex_araneus
ENSXMAG00000025740	apex2	100	75.350	ENSSPAG00000016279	apex2	100	75.175	Stegastes_partitus
ENSXMAG00000025740	apex2	99	46.760	ENSSSCG00000012348	-	99	46.585	Sus_scrofa
ENSXMAG00000025740	apex2	100	66.609	ENSTRUG00000015660	apex2	100	66.265	Takifugu_rubripes
ENSXMAG00000025740	apex2	85	63.618	ENSTNIG00000003725	apex2	100	63.211	Tetraodon_nigroviridis
ENSXMAG00000025740	apex2	92	45.068	ENSTBEG00000010520	APEX2	99	45.174	Tupaia_belangeri
ENSXMAG00000025740	apex2	99	46.422	ENSUAMG00000004720	APEX2	93	58.036	Ursus_americanus
ENSXMAG00000025740	apex2	99	44.056	ENSUMAG00000002892	APEX2	99	44.056	Ursus_maritimus
ENSXMAG00000025740	apex2	99	45.375	ENSVVUG00000005989	APEX2	99	45.201	Vulpes_vulpes
ENSXMAG00000025740	apex2	99	49.648	ENSXETG00000022026	apex2	99	49.648	Xenopus_tropicalis