EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000025929 (Gene tree)
Gene ID: 102220660
Gene Symbol: ostc
Alias: zgc:56559|zgc:86623
Full Name: ribosomal protein L34
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 6255 bases
Position: chr14:16654367-16660621
Accession: 102220660
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000035178	Ribosomal_L34e	PF01199.18	7e-43	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000028965	-	462	-	ENSXMAP00000033647	153 (aa)	-	-
ENSXMAT00000042630	-	818	XM_005816354	ENSXMAP00000035178	117 (aa)	XP_005816411	UPI00003189B6
ENSXMAT00000033964	-	564	XM_005816352	ENSXMAP00000038845	187 (aa)	XP_005816409	-

Gene Model

Click here to download ENSXMAG00000025929's gene model file

Pathways

Pathway ID	Pathway Name	Source
xma03010	Ribosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000025929's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000025929	ostc	100	96.581	ENSCJAG00000042857	-	93	96.581	Callithrix_jacchus
ENSXMAG00000025929	ostc	100	100.000	ENSGAFG00000015425	ostc	100	100.000	Gambusia_affinis