EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000026223 (Gene tree)
Gene ID: 102222315
Gene Symbol: SAR1A
Alias: -
Full Name: GTP-binding protein SAR1b-like
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Minus strand
Length: 6745 bases
Position: chr10:8198726-8205470
Accession: 102222315
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000035761	MMR_HSR1	PF01926.23	5e-06	1	1
ENSXMAP00000036060	MMR_HSR1	PF01926.23	5e-06	1	1
ENSXMAP00000023672	MMR_HSR1	PF01926.23	1.7e-05	1	1
ENSXMAP00000027064	MMR_HSR1	PF01926.23	2.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000026096	-	4394	-	ENSXMAP00000027064	167 (aa)	-	-
ENSXMAT00000026866	-	3312	XM_005794583	ENSXMAP00000035761	198 (aa)	XP_005794640	M4AKT7
ENSXMAT00000023340	-	360	-	ENSXMAP00000023672	119 (aa)	-	-
ENSXMAT00000027558	-	3773	-	ENSXMAP00000036060	198 (aa)	-	M4AKT7

Gene Model

Click here to download ENSXMAG00000026223's gene model file

Pathways

Pathway ID	Pathway Name	Source
xma04141	Protein processing in endoplasmic reticulum	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000026223's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000026223	SAR1A	100	78.788	ENSACIG00000019827	sar1ab	100	78.788	Amphilophus_citrinellus
ENSXMAG00000026223	SAR1A	100	80.303	ENSAOCG00000022062	sar1ab	100	80.303	Amphiprion_ocellaris
ENSXMAG00000026223	SAR1A	100	80.303	ENSAPEG00000011525	sar1ab	100	80.303	Amphiprion_percula
ENSXMAG00000026223	SAR1A	100	83.333	ENSATEG00000003466	sar1ab	100	83.333	Anabas_testudineus
ENSXMAG00000026223	SAR1A	98	81.197	ENSACLG00000013053	sar1ab	100	77.778	Astatotilapia_calliptera
ENSXMAG00000026223	SAR1A	100	82.828	ENSCSEG00000004825	sar1ab	100	82.828	Cynoglossus_semilaevis
ENSXMAG00000026223	SAR1A	100	80.303	ENSCVAG00000015162	sar1ab	100	80.303	Cyprinodon_variegatus
ENSXMAG00000026223	SAR1A	100	95.455	ENSCVAG00000006500	-	100	95.455	Cyprinodon_variegatus
ENSXMAG00000026223	SAR1A	100	82.323	ENSDARG00000033320	sar1ab	100	82.323	Danio_rerio
ENSXMAG00000026223	SAR1A	100	82.323	ENSELUG00000024279	sar1ab	100	82.323	Esox_lucius
ENSXMAG00000026223	SAR1A	100	87.879	ENSELUG00000013652	sar1a	100	87.879	Esox_lucius
ENSXMAG00000026223	SAR1A	100	97.980	ENSFHEG00000012352	-	100	97.980	Fundulus_heteroclitus
ENSXMAG00000026223	SAR1A	100	81.313	ENSFHEG00000021773	sar1ab	100	81.313	Fundulus_heteroclitus
ENSXMAG00000026223	SAR1A	100	80.808	ENSGMOG00000012588	sar1ab	100	80.808	Gadus_morhua
ENSXMAG00000026223	SAR1A	100	80.303	ENSGAFG00000009702	sar1ab	100	80.303	Gambusia_affinis
ENSXMAG00000026223	SAR1A	100	99.160	ENSGAFG00000004846	-	100	99.160	Gambusia_affinis
ENSXMAG00000026223	SAR1A	98	83.761	ENSGACG00000008616	sar1ab	100	81.313	Gasterosteus_aculeatus
ENSXMAG00000026223	SAR1A	98	81.197	ENSHBUG00000021221	sar1ab	100	78.283	Haplochromis_burtoni
ENSXMAG00000026223	SAR1A	100	80.808	ENSHCOG00000002845	sar1ab	80	80.808	Hippocampus_comes
ENSXMAG00000026223	SAR1A	100	79.293	ENSKMAG00000018006	sar1ab	100	79.293	Kryptolebias_marmoratus
ENSXMAG00000026223	SAR1A	97	86.087	ENSLBEG00000001114	sar1ab	100	82.828	Labrus_bergylta
ENSXMAG00000026223	SAR1A	100	81.818	ENSMAMG00000021314	sar1ab	100	81.818	Mastacembelus_armatus
ENSXMAG00000026223	SAR1A	98	81.197	ENSMZEG00005027606	sar1ab	100	77.778	Maylandia_zebra
ENSXMAG00000026223	SAR1A	100	82.828	ENSMMOG00000010360	sar1ab	100	82.828	Mola_mola
ENSXMAG00000026223	SAR1A	98	83.761	ENSMALG00000005831	sar1ab	100	80.303	Monopterus_albus
ENSXMAG00000026223	SAR1A	98	81.197	ENSNBRG00000018772	sar1ab	100	78.283	Neolamprologus_brichardi
ENSXMAG00000026223	SAR1A	100	79.293	ENSONIG00000018509	sar1ab	100	79.293	Oreochromis_niloticus
ENSXMAG00000026223	SAR1A	100	81.313	ENSORLG00000006779	sar1ab	67	81.313	Oryzias_latipes
ENSXMAG00000026223	SAR1A	100	89.394	ENSORLG00000009132	-	90	89.394	Oryzias_latipes
ENSXMAG00000026223	SAR1A	100	89.394	ENSORLG00020007024	-	90	89.394	Oryzias_latipes_hni
ENSXMAG00000026223	SAR1A	100	81.818	ENSORLG00020005458	sar1ab	100	81.818	Oryzias_latipes_hni
ENSXMAG00000026223	SAR1A	100	88.889	ENSORLG00015006223	-	94	92.857	Oryzias_latipes_hsok
ENSXMAG00000026223	SAR1A	100	81.313	ENSORLG00015010542	sar1ab	100	81.313	Oryzias_latipes_hsok
ENSXMAG00000026223	SAR1A	100	81.818	ENSOMEG00000004948	sar1ab	100	81.818	Oryzias_melastigma
ENSXMAG00000026223	SAR1A	100	88.889	ENSOMEG00000012020	-	100	88.889	Oryzias_melastigma
ENSXMAG00000026223	SAR1A	98	86.325	ENSPKIG00000007615	sar1ab	100	82.828	Paramormyrops_kingsleyae
ENSXMAG00000026223	SAR1A	100	83.333	ENSPMGG00000013330	sar1ab	100	83.333	Periophthalmus_magnuspinnatus
ENSXMAG00000026223	SAR1A	100	80.808	ENSPFOG00000023432	sar1ab	100	80.808	Poecilia_formosa
ENSXMAG00000026223	SAR1A	100	81.313	ENSPLAG00000023705	sar1ab	100	81.313	Poecilia_latipinna
ENSXMAG00000026223	SAR1A	100	80.808	ENSPMEG00000000559	sar1ab	100	80.808	Poecilia_mexicana
ENSXMAG00000026223	SAR1A	100	98.990	ENSPMEG00000001717	-	100	98.990	Poecilia_mexicana
ENSXMAG00000026223	SAR1A	100	80.808	ENSPREG00000016098	sar1ab	100	80.808	Poecilia_reticulata
ENSXMAG00000026223	SAR1A	98	81.197	ENSPNYG00000011603	sar1ab	100	78.283	Pundamilia_nyererei
ENSXMAG00000026223	SAR1A	100	82.828	ENSPNAG00000008007	sar1ab	100	82.828	Pygocentrus_nattereri
ENSXMAG00000026223	SAR1A	100	86.364	ENSSFOG00015014010	sar1a	100	86.364	Scleropages_formosus
ENSXMAG00000026223	SAR1A	93	87.387	ENSSMAG00000020758	sar1ab	83	85.217	Scophthalmus_maximus
ENSXMAG00000026223	SAR1A	100	82.323	ENSSDUG00000010773	sar1ab	100	82.323	Seriola_dumerili
ENSXMAG00000026223	SAR1A	100	82.323	ENSSLDG00000025558	sar1ab	100	82.323	Seriola_lalandi_dorsalis
ENSXMAG00000026223	SAR1A	100	80.808	ENSSPAG00000009194	sar1ab	100	80.808	Stegastes_partitus
ENSXMAG00000026223	SAR1A	98	83.761	ENSTRUG00000007269	sar1ab	100	80.808	Takifugu_rubripes
ENSXMAG00000026223	SAR1A	98	82.906	ENSTNIG00000008635	sar1ab	100	79.798	Tetraodon_nigroviridis
ENSXMAG00000026223	SAR1A	100	80.808	ENSXMAG00000003130	sar1ab	100	80.808	Xiphophorus_maculatus