EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000026251 (Gene tree)
Gene ID: 102238081
Gene Symbol: -
Alias: -
Full Name: serum response factor binding protein 1
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 2527 bases
Position: chr13:16620300-16622826
Accession: 102238081
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000022982	BUD22	PF09073.10	1.4e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000038276	-	2234	XM_005812457	ENSXMAP00000022982	548 (aa)	XP_005812514	UPI0003B59213

Gene Model

Click here to download ENSXMAG00000026251's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000026251's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000026251	-	86	38.493	ENSG00000151304	SRFBP1	98	37.628	Homo_sapiens
ENSXMAG00000026251	-	93	54.461	ENSAPOG00000021469	-	84	58.065	Acanthochromis_polyacanthus
ENSXMAG00000026251	-	60	56.250	ENSAMEG00000018050	SRFBP1	74	67.647	Ailuropoda_melanoleuca
ENSXMAG00000026251	-	74	86.275	ENSACIG00000019127	-	99	49.793	Amphilophus_citrinellus
ENSXMAG00000026251	-	88	55.336	ENSAOCG00000002182	-	84	57.841	Amphiprion_ocellaris
ENSXMAG00000026251	-	95	53.690	ENSAPEG00000003041	-	85	58.045	Amphiprion_percula
ENSXMAG00000026251	-	88	56.364	ENSATEG00000007289	-	85	57.230	Anabas_testudineus
ENSXMAG00000026251	-	86	37.271	ENSACAG00000003779	SRFBP1	67	43.144	Anolis_carolinensis
ENSXMAG00000026251	-	88	56.262	ENSACLG00000013909	-	89	53.543	Astatotilapia_calliptera
ENSXMAG00000026251	-	63	57.031	ENSBTAG00000014320	SRFBP1	74	67.647	Bos_taurus
ENSXMAG00000026251	-	86	37.374	ENSCJAG00000017177	SRFBP1	66	42.763	Callithrix_jacchus
ENSXMAG00000026251	-	86	37.980	ENSCAFG00000000512	SRFBP1	75	66.667	Canis_familiaris
ENSXMAG00000026251	-	86	37.980	ENSCAFG00020009389	SRFBP1	74	66.667	Canis_lupus_dingo
ENSXMAG00000026251	-	85	37.014	ENSTSYG00000008630	-	73	70.588	Carlito_syrichta
ENSXMAG00000026251	-	86	38.398	ENSCCAG00000032237	-	66	44.257	Cebus_capucinus
ENSXMAG00000026251	-	60	69.444	ENSCLAG00000003630	SRFBP1	74	69.697	Chinchilla_lanigera
ENSXMAG00000026251	-	86	35.516	ENSCSAG00000014636	SRFBP1	66	42.384	Chlorocebus_sabaeus
ENSXMAG00000026251	-	86	37.577	ENSCGRG00001000718	Srfbp1	96	37.526	Cricetulus_griseus_chok1gshd
ENSXMAG00000026251	-	84	36.478	ENSCGRG00000010837	Srfbp1	99	36.421	Cricetulus_griseus_crigri
ENSXMAG00000026251	-	72	85.366	ENSCSEG00000011789	-	93	63.077	Cynoglossus_semilaevis
ENSXMAG00000026251	-	75	75.714	ENSCVAG00000013010	-	98	74.242	Cyprinodon_variegatus
ENSXMAG00000026251	-	78	53.797	ENSDARG00000075323	srfbp1	75	53.797	Danio_rerio
ENSXMAG00000026251	-	71	31.311	ENSDNOG00000017733	SRFBP1	99	30.882	Dasypus_novemcinctus
ENSXMAG00000026251	-	71	30.227	ENSETEG00000012408	SRFBP1	99	30.633	Echinops_telfairi
ENSXMAG00000026251	-	86	38.430	ENSEASG00005012421	SRFBP1	98	36.929	Equus_asinus_asinus
ENSXMAG00000026251	-	86	38.095	ENSECAG00000015330	SRFBP1	98	36.590	Equus_caballus
ENSXMAG00000026251	-	86	36.735	ENSEEUG00000011514	SRFBP1	98	34.917	Erinaceus_europaeus
ENSXMAG00000026251	-	64	40.476	ENSELUG00000018381	-	98	39.406	Esox_lucius
ENSXMAG00000026251	-	63	57.937	ENSFCAG00000035118	SRFBP1	74	67.647	Felis_catus
ENSXMAG00000026251	-	84	33.129	ENSFALG00000007595	SRFBP1	99	32.649	Ficedula_albicollis
ENSXMAG00000026251	-	87	35.185	ENSFDAG00000005102	SRFBP1	76	55.556	Fukomys_damarensis
ENSXMAG00000026251	-	89	67.387	ENSFHEG00000000477	-	99	64.561	Fundulus_heteroclitus
ENSXMAG00000026251	-	69	78.788	ENSGALG00000005316	SRFBP1	87	77.419	Gallus_gallus
ENSXMAG00000026251	-	100	90.328	ENSGAFG00000018777	-	99	90.055	Gambusia_affinis
ENSXMAG00000026251	-	93	44.509	ENSGACG00000009055	-	83	45.474	Gasterosteus_aculeatus
ENSXMAG00000026251	-	84	38.115	ENSGAGG00000024915	SRFBP1	99	36.701	Gopherus_agassizii
ENSXMAG00000026251	-	86	38.540	ENSGGOG00000007725	SRFBP1	66	43.709	Gorilla_gorilla
ENSXMAG00000026251	-	87	35.960	ENSSTOG00000029184	SRFBP1	72	75.000	Ictidomys_tridecemlineatus
ENSXMAG00000026251	-	70	65.789	ENSJJAG00000013229	Srfbp1	76	60.976	Jaculus_jaculus
ENSXMAG00000026251	-	86	49.896	ENSLBEG00000013924	-	95	49.170	Labrus_bergylta
ENSXMAG00000026251	-	55	71.053	ENSLACG00000004456	SRFBP1	86	69.444	Latimeria_chalumnae
ENSXMAG00000026251	-	86	39.448	ENSLOCG00000008772	SRFBP1	99	38.856	Lepisosteus_oculatus
ENSXMAG00000026251	-	86	35.425	ENSLAFG00000015303	SRFBP1	96	36.875	Loxodonta_africana
ENSXMAG00000026251	-	86	38.337	ENSMMUG00000021009	SRFBP1	66	43.709	Macaca_mulatta
ENSXMAG00000026251	-	88	50.397	ENSMAMG00000004632	-	87	50.097	Mastacembelus_armatus
ENSXMAG00000026251	-	88	56.855	ENSMZEG00005000432	-	88	54.092	Maylandia_zebra
ENSXMAG00000026251	-	63	54.688	ENSMAUG00000009431	Srfbp1	97	36.066	Mesocricetus_auratus
ENSXMAG00000026251	-	63	58.268	ENSMICG00000042923	SRFBP1	76	61.905	Microcebus_murinus
ENSXMAG00000026251	-	89	37.773	ENSMOCG00000006206	Srfbp1	96	38.525	Microtus_ochrogaster
ENSXMAG00000026251	-	86	45.582	ENSMMOG00000021202	-	96	49.898	Mola_mola
ENSXMAG00000026251	-	86	36.253	ENSMODG00000013487	-	87	70.968	Monodelphis_domestica
ENSXMAG00000026251	-	88	55.792	ENSMALG00000001812	-	90	56.836	Monopterus_albus
ENSXMAG00000026251	-	86	36.273	MGP_CAROLIEiJ_G0022271	Srfbp1	96	39.212	Mus_caroli
ENSXMAG00000026251	-	86	39.381	ENSMUSG00000024528	Srfbp1	96	39.130	Mus_musculus
ENSXMAG00000026251	-	86	38.809	MGP_PahariEiJ_G0019004	Srfbp1	96	38.763	Mus_pahari
ENSXMAG00000026251	-	86	40.164	MGP_SPRETEiJ_G0023184	Srfbp1	96	40.452	Mus_spretus
ENSXMAG00000026251	-	84	33.540	ENSMPUG00000013031	SRFBP1	74	67.647	Mustela_putorius_furo
ENSXMAG00000026251	-	87	37.120	ENSMLUG00000009984	SRFBP1	74	70.968	Myotis_lucifugus
ENSXMAG00000026251	-	61	56.897	ENSNGAG00000013229	Srfbp1	73	59.091	Nannospalax_galili
ENSXMAG00000026251	-	87	51.667	ENSNBRG00000001146	-	98	51.572	Neolamprologus_brichardi
ENSXMAG00000026251	-	86	38.000	ENSNLEG00000011949	SRFBP1	66	43.189	Nomascus_leucogenys
ENSXMAG00000026251	-	84	32.724	ENSODEG00000007258	SRFBP1	99	34.082	Octodon_degus
ENSXMAG00000026251	-	77	33.486	ENSOANG00000010042	-	98	32.719	Ornithorhynchus_anatinus
ENSXMAG00000026251	-	56	42.249	ENSOCUG00000009556	SRFBP1	67	40.850	Oryctolagus_cuniculus
ENSXMAG00000026251	-	91	49.343	ENSORLG00000014234	-	88	48.356	Oryzias_latipes
ENSXMAG00000026251	-	86	49.787	ENSORLG00015000238	-	97	49.789	Oryzias_latipes_hsok
ENSXMAG00000026251	-	86	36.145	ENSOGAG00000032423	SRFBP1	99	36.694	Otolemur_garnettii
ENSXMAG00000026251	-	86	37.778	ENSPTRG00000017172	SRFBP1	66	42.568	Pan_troglodytes
ENSXMAG00000026251	-	86	38.211	ENSPANG00000003799	SRFBP1	74	67.647	Papio_anubis
ENSXMAG00000026251	-	86	40.631	ENSPKIG00000024291	-	99	42.032	Paramormyrops_kingsleyae
ENSXMAG00000026251	-	87	37.067	ENSPSIG00000010650	SRFBP1	99	37.782	Pelodiscus_sinensis
ENSXMAG00000026251	-	73	85.417	ENSPMGG00000001675	-	98	48.837	Periophthalmus_magnuspinnatus
ENSXMAG00000026251	-	99	80.367	ENSPFOG00000005272	-	99	79.190	Poecilia_formosa
ENSXMAG00000026251	-	99	87.845	ENSPLAG00000018282	-	99	86.740	Poecilia_latipinna
ENSXMAG00000026251	-	99	86.740	ENSPMEG00000020184	-	99	86.372	Poecilia_mexicana
ENSXMAG00000026251	-	86	75.105	ENSPREG00000017248	-	99	73.629	Poecilia_reticulata
ENSXMAG00000026251	-	86	38.200	ENSPPYG00000015714	SRFBP1	66	43.046	Pongo_abelii
ENSXMAG00000026251	-	63	56.923	ENSPCOG00000027331	SRFBP1	99	36.183	Propithecus_coquereli
ENSXMAG00000026251	-	88	55.489	ENSPNYG00000010355	-	99	49.064	Pundamilia_nyererei
ENSXMAG00000026251	-	65	52.555	ENSRNOG00000014808	Srfbp1	76	65.000	Rattus_norvegicus
ENSXMAG00000026251	-	86	39.059	ENSSBOG00000015464	-	66	44.108	Saimiri_boliviensis_boliviensis
ENSXMAG00000026251	-	63	56.693	ENSSHAG00000016003	SRFBP1	88	67.647	Sarcophilus_harrisii
ENSXMAG00000026251	-	87	42.262	ENSSFOG00015001274	srfbp1	99	41.584	Scleropages_formosus
ENSXMAG00000026251	-	91	51.306	ENSSMAG00000020630	-	87	52.519	Scophthalmus_maximus
ENSXMAG00000026251	-	91	55.238	ENSSDUG00000001828	-	86	56.400	Seriola_dumerili
ENSXMAG00000026251	-	86	37.475	ENSSARG00000010669	SRFBP1	75	61.905	Sorex_araneus
ENSXMAG00000026251	-	85	34.979	ENSSPUG00000009204	SRFBP1	99	35.729	Sphenodon_punctatus
ENSXMAG00000026251	-	91	55.898	ENSSPAG00000010728	-	85	59.961	Stegastes_partitus
ENSXMAG00000026251	-	87	51.134	ENSTNIG00000009267	-	98	50.932	Tetraodon_nigroviridis
ENSXMAG00000026251	-	84	37.888	ENSUAMG00000016707	SRFBP1	74	67.647	Ursus_americanus
ENSXMAG00000026251	-	85	34.511	ENSUMAG00000018340	SRFBP1	75	67.647	Ursus_maritimus
ENSXMAG00000026251	-	86	37.980	ENSVVUG00000019178	SRFBP1	74	66.667	Vulpes_vulpes
ENSXMAG00000026251	-	86	36.821	ENSXETG00000004681	srfbp1	96	36.382	Xenopus_tropicalis
ENSXMAG00000026251	-	87	97.286	ENSXCOG00000003410	-	99	97.286	Xiphophorus_couchianus