EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000026416 (Gene tree)
Gene ID: 102234962
Gene Symbol: srsf5b
Alias: sfrs5b|wu:fe15e05|zgc:113907|zgc:92278
Full Name: serine/arginine-rich splicing factor 5
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 7638 bases
Position: chr15:6054620-6062257
Accession: 102234962
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000037835	RRM_1	PF00076.22	5.9e-32	1	2
ENSXMAP00000037835	RRM_1	PF00076.22	5.9e-32	2	2
ENSXMAP00000028231	RRM_1	PF00076.22	9.5e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000023183	-	2684	XM_023347780	ENSXMAP00000037835	302 (aa)	XP_023203548	M4A039
ENSXMAT00000026331	-	1331	-	ENSXMAP00000028231	153 (aa)	-	-

Gene Model

Click here to download ENSXMAG00000026416's gene model file

Pathways

Pathway ID	Pathway Name	Source
xma03040	Spliceosome	KEGG
xma05168	Herpes simplex virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000026416's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000026416	srsf5b	88	74.627	ENSG00000100650	SRSF5	99	75.385	Homo_sapiens
ENSXMAG00000026416	srsf5b	84	99.225	ENSAPOG00000008642	srsf5b	92	93.333	Acanthochromis_polyacanthus
ENSXMAG00000026416	srsf5b	84	75.969	ENSAMEG00000014574	SRSF5	67	82.105	Ailuropoda_melanoleuca
ENSXMAG00000026416	srsf5b	100	90.429	ENSACIG00000010742	srsf5b	100	86.047	Amphilophus_citrinellus
ENSXMAG00000026416	srsf5b	84	99.225	ENSAOCG00000005719	srsf5b	92	92.963	Amphiprion_ocellaris
ENSXMAG00000026416	srsf5b	84	99.225	ENSAPEG00000007830	srsf5b	92	92.963	Amphiprion_percula
ENSXMAG00000026416	srsf5b	84	97.674	ENSATEG00000019112	srsf5b	92	91.111	Anabas_testudineus
ENSXMAG00000026416	srsf5b	80	75.610	ENSAPLG00000014681	SRSF5	93	71.648	Anas_platyrhynchos
ENSXMAG00000026416	srsf5b	84	75.194	ENSACAG00000005143	SRSF5	93	74.330	Anolis_carolinensis
ENSXMAG00000026416	srsf5b	85	73.077	ENSANAG00000037529	-	95	73.643	Aotus_nancymaae
ENSXMAG00000026416	srsf5b	88	74.627	ENSANAG00000027977	-	76	90.667	Aotus_nancymaae
ENSXMAG00000026416	srsf5b	100	90.429	ENSACLG00000026424	srsf5b	92	93.333	Astatotilapia_calliptera
ENSXMAG00000026416	srsf5b	100	88.235	ENSAMXG00000011932	srsf5b	100	88.235	Astyanax_mexicanus
ENSXMAG00000026416	srsf5b	84	75.969	ENSBTAG00000011596	SRSF5	67	82.105	Bos_taurus
ENSXMAG00000026416	srsf5b	88	74.627	ENSCJAG00000014884	SRSF5	76	90.667	Callithrix_jacchus
ENSXMAG00000026416	srsf5b	84	75.969	ENSCAFG00000016589	SRSF5	67	82.105	Canis_familiaris
ENSXMAG00000026416	srsf5b	84	75.969	ENSCAFG00020005661	SRSF5	67	82.105	Canis_lupus_dingo
ENSXMAG00000026416	srsf5b	84	75.969	ENSCHIG00000016794	SRSF5	66	82.105	Capra_hircus
ENSXMAG00000026416	srsf5b	88	74.627	ENSTSYG00000007786	SRSF5	76	90.667	Carlito_syrichta
ENSXMAG00000026416	srsf5b	84	75.969	ENSCAPG00000008801	SRSF5	97	70.545	Cavia_aperea
ENSXMAG00000026416	srsf5b	84	75.969	ENSCPOG00000039926	SRSF5	91	72.624	Cavia_porcellus
ENSXMAG00000026416	srsf5b	88	74.627	ENSCCAG00000029002	SRSF5	76	90.667	Cebus_capucinus
ENSXMAG00000026416	srsf5b	88	74.627	ENSCATG00000045051	SRSF5	76	90.667	Cercocebus_atys
ENSXMAG00000026416	srsf5b	84	75.969	ENSCLAG00000004755	SRSF5	91	73.180	Chinchilla_lanigera
ENSXMAG00000026416	srsf5b	84	75.969	ENSCSAG00000013041	SRSF5	93	70.632	Chlorocebus_sabaeus
ENSXMAG00000026416	srsf5b	84	75.969	ENSCPBG00000021653	SRSF5	92	73.946	Chrysemys_picta_bellii
ENSXMAG00000026416	srsf5b	88	74.627	ENSCANG00000030560	SRSF5	76	90.667	Colobus_angolensis_palliatus
ENSXMAG00000026416	srsf5b	84	75.969	ENSCGRG00001015339	Srsf5	97	66.667	Cricetulus_griseus_chok1gshd
ENSXMAG00000026416	srsf5b	84	75.969	ENSCGRG00000009833	Srsf5	92	71.863	Cricetulus_griseus_crigri
ENSXMAG00000026416	srsf5b	84	97.692	ENSCSEG00000003801	srsf5b	91	90.262	Cynoglossus_semilaevis
ENSXMAG00000026416	srsf5b	84	98.450	ENSCVAG00000017240	srsf5b	88	89.236	Cyprinodon_variegatus
ENSXMAG00000026416	srsf5b	97	88.514	ENSDARG00000027734	srsf5b	90	93.023	Danio_rerio
ENSXMAG00000026416	srsf5b	84	75.969	ENSDNOG00000006160	SRSF5	68	82.105	Dasypus_novemcinctus
ENSXMAG00000026416	srsf5b	84	75.969	ENSDORG00000003989	Srsf5	97	65.556	Dipodomys_ordii
ENSXMAG00000026416	srsf5b	84	72.093	ENSETEG00000020396	SRSF5	68	79.365	Echinops_telfairi
ENSXMAG00000026416	srsf5b	84	57.037	ENSEBUG00000006229	srsf5b	95	46.254	Eptatretus_burgeri
ENSXMAG00000026416	srsf5b	84	75.969	ENSEASG00005016615	SRSF5	67	82.105	Equus_asinus_asinus
ENSXMAG00000026416	srsf5b	88	74.627	ENSECAG00000026873	SRSF5	92	74.627	Equus_caballus
ENSXMAG00000026416	srsf5b	100	82.840	ENSELUG00000019852	srsf5b	100	84.024	Esox_lucius
ENSXMAG00000026416	srsf5b	88	74.627	ENSFCAG00000008848	SRSF5	92	74.627	Felis_catus
ENSXMAG00000026416	srsf5b	84	74.419	ENSFALG00000004979	SRSF5	94	72.830	Ficedula_albicollis
ENSXMAG00000026416	srsf5b	84	75.969	ENSFDAG00000011562	SRSF5	96	70.290	Fukomys_damarensis
ENSXMAG00000026416	srsf5b	100	94.156	ENSFHEG00000009476	srsf5b	100	94.156	Fundulus_heteroclitus
ENSXMAG00000026416	srsf5b	84	91.912	ENSGMOG00000000595	srsf5b	99	80.531	Gadus_morhua
ENSXMAG00000026416	srsf5b	88	72.388	ENSGALG00000009421	SRSF5	92	73.881	Gallus_gallus
ENSXMAG00000026416	srsf5b	100	98.675	ENSGAFG00000002865	srsf5b	100	98.675	Gambusia_affinis
ENSXMAG00000026416	srsf5b	100	85.000	ENSGACG00000007834	srsf5b	100	86.875	Gasterosteus_aculeatus
ENSXMAG00000026416	srsf5b	84	75.969	ENSGAGG00000004447	SRSF5	92	73.946	Gopherus_agassizii
ENSXMAG00000026416	srsf5b	88	74.627	ENSGGOG00000016462	SRSF5	76	90.667	Gorilla_gorilla
ENSXMAG00000026416	srsf5b	100	90.099	ENSHBUG00000012462	srsf5b	93	99.225	Haplochromis_burtoni
ENSXMAG00000026416	srsf5b	84	75.194	ENSHGLG00000010147	SRSF5	67	81.579	Heterocephalus_glaber_female
ENSXMAG00000026416	srsf5b	59	59.444	ENSHGLG00100000095	-	62	59.116	Heterocephalus_glaber_male
ENSXMAG00000026416	srsf5b	84	75.194	ENSHGLG00100015328	SRSF5	67	81.579	Heterocephalus_glaber_male
ENSXMAG00000026416	srsf5b	84	87.879	ENSHCOG00000005592	srsf5b	88	80.843	Hippocampus_comes
ENSXMAG00000026416	srsf5b	84	75.969	ENSSTOG00000020672	SRSF5	67	82.105	Ictidomys_tridecemlineatus
ENSXMAG00000026416	srsf5b	84	75.969	ENSJJAG00000001688	Srsf5	67	82.105	Jaculus_jaculus
ENSXMAG00000026416	srsf5b	100	94.771	ENSKMAG00000020486	srsf5b	100	94.771	Kryptolebias_marmoratus
ENSXMAG00000026416	srsf5b	84	98.462	ENSLBEG00000013647	srsf5b	92	91.513	Labrus_bergylta
ENSXMAG00000026416	srsf5b	84	79.845	ENSLACG00000005874	SRSF5	92	75.094	Latimeria_chalumnae
ENSXMAG00000026416	srsf5b	84	79.104	ENSLOCG00000012438	srsf5b	70	83.505	Lepisosteus_oculatus
ENSXMAG00000026416	srsf5b	84	75.194	ENSLAFG00000005260	SRSF5	96	70.036	Loxodonta_africana
ENSXMAG00000026416	srsf5b	88	74.627	ENSMFAG00000002393	SRSF5	76	90.667	Macaca_fascicularis
ENSXMAG00000026416	srsf5b	88	74.627	ENSMNEG00000030872	SRSF5	76	90.667	Macaca_nemestrina
ENSXMAG00000026416	srsf5b	88	74.627	ENSMLEG00000030017	SRSF5	76	90.667	Mandrillus_leucophaeus
ENSXMAG00000026416	srsf5b	84	96.899	ENSMAMG00000002673	srsf5b	92	91.481	Mastacembelus_armatus
ENSXMAG00000026416	srsf5b	100	90.429	ENSMZEG00005003550	srsf5b	92	93.333	Maylandia_zebra
ENSXMAG00000026416	srsf5b	59	64.444	ENSMGAG00000011835	SRSF5	98	59.825	Meleagris_gallopavo
ENSXMAG00000026416	srsf5b	84	75.969	ENSMAUG00000009544	Srsf5	92	71.863	Mesocricetus_auratus
ENSXMAG00000026416	srsf5b	88	74.627	ENSMICG00000037432	-	76	90.667	Microcebus_murinus
ENSXMAG00000026416	srsf5b	84	75.969	ENSMOCG00000013134	Srsf5	92	71.863	Microtus_ochrogaster
ENSXMAG00000026416	srsf5b	85	96.154	ENSMMOG00000000137	srsf5b	95	80.451	Mola_mola
ENSXMAG00000026416	srsf5b	84	75.969	ENSMODG00000011362	SRSF5	92	73.563	Monodelphis_domestica
ENSXMAG00000026416	srsf5b	100	97.386	ENSMALG00000021875	srsf5b	100	97.386	Monopterus_albus
ENSXMAG00000026416	srsf5b	84	75.969	ENSMUSG00000021134	Srsf5	96	90.909	Mus_musculus
ENSXMAG00000026416	srsf5b	84	75.969	MGP_PahariEiJ_G0029659	Srsf5	92	71.863	Mus_pahari
ENSXMAG00000026416	srsf5b	84	75.969	ENSMPUG00000007458	SRSF5	67	82.105	Mustela_putorius_furo
ENSXMAG00000026416	srsf5b	84	75.969	ENSMLUG00000011939	SRSF5	91	66.667	Myotis_lucifugus
ENSXMAG00000026416	srsf5b	84	75.969	ENSNGAG00000010073	-	67	82.105	Nannospalax_galili
ENSXMAG00000026416	srsf5b	100	87.171	ENSNBRG00000001285	srsf5b	92	92.251	Neolamprologus_brichardi
ENSXMAG00000026416	srsf5b	88	74.627	ENSNLEG00000001615	SRSF5	76	90.667	Nomascus_leucogenys
ENSXMAG00000026416	srsf5b	84	75.969	ENSOPRG00000008286	SRSF5	91	72.901	Ochotona_princeps
ENSXMAG00000026416	srsf5b	84	75.969	ENSODEG00000013469	-	92	73.180	Octodon_degus
ENSXMAG00000026416	srsf5b	84	73.643	ENSODEG00000000700	-	97	70.566	Octodon_degus
ENSXMAG00000026416	srsf5b	100	90.429	ENSONIG00000005759	srsf5b	92	93.333	Oreochromis_niloticus
ENSXMAG00000026416	srsf5b	84	69.767	ENSOANG00000013336	SRSF5	68	78.421	Ornithorhynchus_anatinus
ENSXMAG00000026416	srsf5b	84	75.969	ENSOCUG00000009274	SRSF5	90	72.797	Oryctolagus_cuniculus
ENSXMAG00000026416	srsf5b	84	90.840	ENSORLG00000029854	srsf5b	92	79.461	Oryzias_latipes
ENSXMAG00000026416	srsf5b	89	90.775	ENSORLG00015001720	srsf5b	92	91.144	Oryzias_latipes_hsok
ENSXMAG00000026416	srsf5b	90	90.842	ENSOMEG00000020690	srsf5b	67	90.741	Oryzias_melastigma
ENSXMAG00000026416	srsf5b	84	75.969	ENSOGAG00000015122	SRSF5	67	82.105	Otolemur_garnettii
ENSXMAG00000026416	srsf5b	88	74.627	ENSPPAG00000029921	SRSF5	76	90.667	Pan_paniscus
ENSXMAG00000026416	srsf5b	88	74.627	ENSPPRG00000012903	SRSF5	92	74.627	Panthera_pardus
ENSXMAG00000026416	srsf5b	88	74.627	ENSPTIG00000018589	SRSF5	92	74.627	Panthera_tigris_altaica
ENSXMAG00000026416	srsf5b	88	74.627	ENSPTRG00000006488	SRSF5	76	90.667	Pan_troglodytes
ENSXMAG00000026416	srsf5b	88	74.627	ENSPANG00000021091	SRSF5	76	90.667	Papio_anubis
ENSXMAG00000026416	srsf5b	84	75.969	ENSPSIG00000012522	SRSF5	93	73.946	Pelodiscus_sinensis
ENSXMAG00000026416	srsf5b	88	91.111	ENSPMGG00000021646	srsf5b	91	95.385	Periophthalmus_magnuspinnatus
ENSXMAG00000026416	srsf5b	84	75.969	ENSPEMG00000020173	Srsf5	97	66.667	Peromyscus_maniculatus_bairdii
ENSXMAG00000026416	srsf5b	84	56.204	ENSPMAG00000007790	srsf5b	68	60.914	Petromyzon_marinus
ENSXMAG00000026416	srsf5b	84	75.969	ENSPCIG00000011877	SRSF5	92	73.563	Phascolarctos_cinereus
ENSXMAG00000026416	srsf5b	100	98.675	ENSPFOG00000017700	srsf5b	100	98.675	Poecilia_formosa
ENSXMAG00000026416	srsf5b	100	99.007	ENSPLAG00000006480	srsf5b	100	99.007	Poecilia_latipinna
ENSXMAG00000026416	srsf5b	100	99.346	ENSPMEG00000012751	srsf5b	100	99.346	Poecilia_mexicana
ENSXMAG00000026416	srsf5b	100	98.675	ENSPREG00000010381	srsf5b	100	98.675	Poecilia_reticulata
ENSXMAG00000026416	srsf5b	84	75.969	ENSPPYG00000005945	SRSF5	93	70.632	Pongo_abelii
ENSXMAG00000026416	srsf5b	84	75.194	ENSPCAG00000004405	SRSF5	100	79.085	Procavia_capensis
ENSXMAG00000026416	srsf5b	88	74.627	ENSPCOG00000014442	SRSF5	92	74.627	Propithecus_coquereli
ENSXMAG00000026416	srsf5b	85	98.462	ENSPNYG00000002669	srsf5b	95	98.462	Pundamilia_nyererei
ENSXMAG00000026416	srsf5b	100	87.582	ENSPNAG00000011262	srsf5b	100	87.582	Pygocentrus_nattereri
ENSXMAG00000026416	srsf5b	84	75.969	ENSRNOG00000005513	Srsf5	97	66.667	Rattus_norvegicus
ENSXMAG00000026416	srsf5b	88	74.627	ENSRBIG00000013003	SRSF5	76	90.667	Rhinopithecus_bieti
ENSXMAG00000026416	srsf5b	88	74.627	ENSRROG00000043407	SRSF5	76	90.667	Rhinopithecus_roxellana
ENSXMAG00000026416	srsf5b	88	74.627	ENSSBOG00000030784	SRSF5	76	90.667	Saimiri_boliviensis_boliviensis
ENSXMAG00000026416	srsf5b	84	75.969	ENSSHAG00000002871	SRSF5	92	73.563	Sarcophilus_harrisii
ENSXMAG00000026416	srsf5b	90	81.879	ENSSMAG00000019728	srsf5b	91	82.373	Scophthalmus_maximus
ENSXMAG00000026416	srsf5b	84	98.450	ENSSDUG00000005766	srsf5b	92	92.748	Seriola_dumerili
ENSXMAG00000026416	srsf5b	100	96.732	ENSSLDG00000023255	srsf5b	100	96.732	Seriola_lalandi_dorsalis
ENSXMAG00000026416	srsf5b	61	70.811	ENSSARG00000001059	SRSF5	67	70.000	Sorex_araneus
ENSXMAG00000026416	srsf5b	88	73.381	ENSSPUG00000002464	SRSF5	93	72.119	Sphenodon_punctatus
ENSXMAG00000026416	srsf5b	84	99.225	ENSSPAG00000015325	srsf5b	92	93.333	Stegastes_partitus
ENSXMAG00000026416	srsf5b	84	75.969	ENSSSCG00000032583	SRSF5	98	65.693	Sus_scrofa
ENSXMAG00000026416	srsf5b	84	74.419	ENSTGUG00000011425	SRSF5	94	73.208	Taeniopygia_guttata
ENSXMAG00000026416	srsf5b	84	89.147	ENSTRUG00000017811	srsf5b	95	75.585	Takifugu_rubripes
ENSXMAG00000026416	srsf5b	91	81.949	ENSTNIG00000016411	srsf5b	95	83.026	Tetraodon_nigroviridis
ENSXMAG00000026416	srsf5b	90	71.739	ENSTBEG00000001972	SRSF5	93	68.773	Tupaia_belangeri
ENSXMAG00000026416	srsf5b	84	75.781	ENSTTRG00000003318	SRSF5	66	82.011	Tursiops_truncatus
ENSXMAG00000026416	srsf5b	84	75.969	ENSUAMG00000014184	SRSF5	67	82.105	Ursus_americanus
ENSXMAG00000026416	srsf5b	84	75.969	ENSUMAG00000009827	SRSF5	98	64.964	Ursus_maritimus
ENSXMAG00000026416	srsf5b	84	75.969	ENSVPAG00000006448	SRSF5	67	82.105	Vicugna_pacos
ENSXMAG00000026416	srsf5b	84	75.969	ENSVVUG00000003790	SRSF5	67	82.105	Vulpes_vulpes
ENSXMAG00000026416	srsf5b	84	79.070	ENSXETG00000002211	srsf5	94	72.761	Xenopus_tropicalis
ENSXMAG00000026416	srsf5b	100	96.689	ENSXCOG00000001570	srsf5b	100	96.689	Xiphophorus_couchianus