EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000026495 (Gene tree)
Gene ID: 102219457
Gene Symbol: polr2eb
Alias: fk97g10|polr2e|wu:fk97g10|zgc:101098
Full Name: RNA polymerase II subunit E
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Minus strand
Length: 3181 bases
Position: chr9:20621823-20625003
Accession: 102219457
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000022828	RNA_pol_Rpb5_N	PF03871.14	6.7e-35	1	1
ENSXMAP00000038177	RNA_pol_Rpb5_N	PF03871.14	8.5e-35	1	1
ENSXMAP00000038177	RNA_pol_Rpb5_C	PF01191.19	2.1e-34	1	1
ENSXMAP00000022828	RNA_pol_Rpb5_C	PF01191.19	2.3e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000021648	-	552	-	ENSXMAP00000022828	183 (aa)	-	-
ENSXMAT00000021273	-	1194	XM_014471474	ENSXMAP00000038177	210 (aa)	XP_014326960	M4AC47

Gene Model

Click here to download ENSXMAG00000026495's gene model file

Pathways

Pathway ID	Pathway Name	Source
xma03020	RNA polymerase	KEGG
xma04623	Cytosolic DNA-sensing pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000026495's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000026495	polr2eb	100	95.714	ENSG00000099817	POLR2E	100	95.714	Homo_sapiens
ENSXMAG00000026495	polr2eb	100	99.524	ENSAPOG00000002935	polr2eb	100	99.524	Acanthochromis_polyacanthus
ENSXMAG00000026495	polr2eb	100	96.190	ENSAMEG00000003159	POLR2E	100	96.190	Ailuropoda_melanoleuca
ENSXMAG00000026495	polr2eb	100	100.000	ENSACIG00000024371	polr2eb	100	100.000	Amphilophus_citrinellus
ENSXMAG00000026495	polr2eb	100	99.524	ENSAOCG00000018166	polr2eb	100	99.524	Amphiprion_ocellaris
ENSXMAG00000026495	polr2eb	100	99.524	ENSAPEG00000009000	polr2eb	100	99.524	Amphiprion_percula
ENSXMAG00000026495	polr2eb	100	99.524	ENSATEG00000023760	polr2eb	100	99.524	Anabas_testudineus
ENSXMAG00000026495	polr2eb	100	96.190	ENSANAG00000038488	POLR2E	100	96.190	Aotus_nancymaae
ENSXMAG00000026495	polr2eb	100	100.000	ENSACLG00000005254	polr2eb	100	100.000	Astatotilapia_calliptera
ENSXMAG00000026495	polr2eb	100	99.048	ENSAMXG00000018915	POLR2E	100	99.048	Astyanax_mexicanus
ENSXMAG00000026495	polr2eb	100	96.190	ENSBTAG00000020776	POLR2E	100	96.190	Bos_taurus
ENSXMAG00000026495	polr2eb	99	79.327	WBGene00019246	rpb-5	99	79.327	Caenorhabditis_elegans
ENSXMAG00000026495	polr2eb	67	90.714	ENSCJAG00000007666	-	77	90.714	Callithrix_jacchus
ENSXMAG00000026495	polr2eb	100	93.333	ENSCAFG00000019546	POLR2E	100	93.333	Canis_familiaris
ENSXMAG00000026495	polr2eb	100	96.190	ENSCAFG00020017111	POLR2E	100	96.190	Canis_lupus_dingo
ENSXMAG00000026495	polr2eb	100	96.190	ENSCHIG00000014151	POLR2E	100	96.190	Capra_hircus
ENSXMAG00000026495	polr2eb	100	79.070	ENSTSYG00000026377	POLR2E	100	79.070	Carlito_syrichta
ENSXMAG00000026495	polr2eb	91	95.833	ENSCAPG00000010843	POLR2E	93	95.833	Cavia_aperea
ENSXMAG00000026495	polr2eb	100	96.190	ENSCPOG00000001542	POLR2E	100	96.190	Cavia_porcellus
ENSXMAG00000026495	polr2eb	100	96.190	ENSCCAG00000025658	POLR2E	100	96.190	Cebus_capucinus
ENSXMAG00000026495	polr2eb	100	96.190	ENSCATG00000008926	POLR2E	100	96.190	Cercocebus_atys
ENSXMAG00000026495	polr2eb	98	73.659	ENSCLAG00000009238	-	100	73.659	Chinchilla_lanigera
ENSXMAG00000026495	polr2eb	100	95.714	ENSCLAG00000014874	-	100	95.714	Chinchilla_lanigera
ENSXMAG00000026495	polr2eb	100	96.190	ENSCSAG00000012336	POLR2E	100	96.190	Chlorocebus_sabaeus
ENSXMAG00000026495	polr2eb	100	96.667	ENSCPBG00000009702	POLR2E	100	96.667	Chrysemys_picta_bellii
ENSXMAG00000026495	polr2eb	100	86.667	ENSCING00000024933	-	99	86.667	Ciona_intestinalis
ENSXMAG00000026495	polr2eb	100	96.190	ENSCANG00000025560	POLR2E	100	96.190	Colobus_angolensis_palliatus
ENSXMAG00000026495	polr2eb	100	96.190	ENSCGRG00001022927	Polr2e	100	96.190	Cricetulus_griseus_chok1gshd
ENSXMAG00000026495	polr2eb	100	89.767	ENSCGRG00000016441	Polr2e	100	89.767	Cricetulus_griseus_crigri
ENSXMAG00000026495	polr2eb	100	98.571	ENSCSEG00000007107	polr2eb	100	98.361	Cynoglossus_semilaevis
ENSXMAG00000026495	polr2eb	100	99.524	ENSCVAG00000019940	polr2eb	100	99.524	Cyprinodon_variegatus
ENSXMAG00000026495	polr2eb	100	98.571	ENSDARG00000026183	polr2eb	100	98.571	Danio_rerio
ENSXMAG00000026495	polr2eb	90	95.789	ENSDNOG00000044994	POLR2E	84	95.789	Dasypus_novemcinctus
ENSXMAG00000026495	polr2eb	100	96.190	ENSDORG00000001154	Polr2e	100	96.190	Dipodomys_ordii
ENSXMAG00000026495	polr2eb	99	86.124	FBgn0033571	Rpb5	99	86.124	Drosophila_melanogaster
ENSXMAG00000026495	polr2eb	75	92.357	ENSEBUG00000010159	-	76	92.357	Eptatretus_burgeri
ENSXMAG00000026495	polr2eb	69	88.966	ENSEASG00005021615	POLR2E	67	83.333	Equus_asinus_asinus
ENSXMAG00000026495	polr2eb	100	95.628	ENSECAG00000011124	POLR2E	100	95.628	Equus_caballus
ENSXMAG00000026495	polr2eb	100	96.667	ENSELUG00000020646	polr2e	100	96.667	Esox_lucius
ENSXMAG00000026495	polr2eb	100	97.619	ENSELUG00000005815	POLR2E	100	97.619	Esox_lucius
ENSXMAG00000026495	polr2eb	100	95.714	ENSFCAG00000007318	POLR2E	100	95.714	Felis_catus
ENSXMAG00000026495	polr2eb	91	96.354	ENSFALG00000013986	POLR2E	99	96.354	Ficedula_albicollis
ENSXMAG00000026495	polr2eb	100	96.190	ENSFDAG00000014539	POLR2E	100	96.190	Fukomys_damarensis
ENSXMAG00000026495	polr2eb	100	99.524	ENSFHEG00000022398	polr2eb	100	99.524	Fundulus_heteroclitus
ENSXMAG00000026495	polr2eb	100	98.095	ENSGMOG00000007615	polr2eb	100	98.095	Gadus_morhua
ENSXMAG00000026495	polr2eb	100	96.667	ENSGALG00000002591	POLR2E	100	96.667	Gallus_gallus
ENSXMAG00000026495	polr2eb	100	100.000	ENSGAFG00000005087	polr2eb	100	100.000	Gambusia_affinis
ENSXMAG00000026495	polr2eb	100	98.095	ENSGACG00000013247	polr2eb	100	98.095	Gasterosteus_aculeatus
ENSXMAG00000026495	polr2eb	100	96.667	ENSGAGG00000008356	POLR2E	100	96.667	Gopherus_agassizii
ENSXMAG00000026495	polr2eb	100	96.190	ENSGGOG00000011267	POLR2E	100	96.190	Gorilla_gorilla
ENSXMAG00000026495	polr2eb	68	95.070	ENSHBUG00000011099	polr2eb	100	95.070	Haplochromis_burtoni
ENSXMAG00000026495	polr2eb	100	96.190	ENSHGLG00000013330	POLR2E	100	96.190	Heterocephalus_glaber_female
ENSXMAG00000026495	polr2eb	100	96.190	ENSHGLG00100011014	POLR2E	100	96.190	Heterocephalus_glaber_male
ENSXMAG00000026495	polr2eb	100	98.095	ENSHCOG00000000906	polr2eb	100	98.095	Hippocampus_comes
ENSXMAG00000026495	polr2eb	53	95.536	ENSHCOG00000012099	-	88	95.536	Hippocampus_comes
ENSXMAG00000026495	polr2eb	100	99.524	ENSIPUG00000019801	polr2e	100	99.524	Ictalurus_punctatus
ENSXMAG00000026495	polr2eb	100	96.190	ENSSTOG00000002853	POLR2E	100	96.190	Ictidomys_tridecemlineatus
ENSXMAG00000026495	polr2eb	100	96.190	ENSJJAG00000016595	-	100	96.190	Jaculus_jaculus
ENSXMAG00000026495	polr2eb	100	89.617	ENSJJAG00000003145	-	100	89.617	Jaculus_jaculus
ENSXMAG00000026495	polr2eb	77	78.882	ENSJJAG00000015812	-	100	78.882	Jaculus_jaculus
ENSXMAG00000026495	polr2eb	100	99.524	ENSKMAG00000005954	polr2eb	100	99.524	Kryptolebias_marmoratus
ENSXMAG00000026495	polr2eb	100	99.524	ENSLBEG00000024802	polr2eb	100	99.524	Labrus_bergylta
ENSXMAG00000026495	polr2eb	100	97.143	ENSLACG00000013686	POLR2E	100	97.143	Latimeria_chalumnae
ENSXMAG00000026495	polr2eb	77	100.000	ENSLOCG00000004599	POLR2E	100	100.000	Lepisosteus_oculatus
ENSXMAG00000026495	polr2eb	100	76.887	ENSLAFG00000025587	POLR2E	100	76.887	Loxodonta_africana
ENSXMAG00000026495	polr2eb	100	96.190	ENSMFAG00000002884	POLR2E	100	96.190	Macaca_fascicularis
ENSXMAG00000026495	polr2eb	100	96.190	ENSMMUG00000013927	POLR2E	100	96.190	Macaca_mulatta
ENSXMAG00000026495	polr2eb	100	64.455	ENSMNEG00000033452	-	100	64.455	Macaca_nemestrina
ENSXMAG00000026495	polr2eb	100	96.190	ENSMNEG00000034046	-	100	96.190	Macaca_nemestrina
ENSXMAG00000026495	polr2eb	92	79.275	ENSMLEG00000012405	POLR2E	94	79.275	Mandrillus_leucophaeus
ENSXMAG00000026495	polr2eb	100	99.524	ENSMAMG00000018703	polr2eb	100	99.524	Mastacembelus_armatus
ENSXMAG00000026495	polr2eb	100	100.000	ENSMZEG00005010796	polr2eb	100	100.000	Maylandia_zebra
ENSXMAG00000026495	polr2eb	100	95.735	ENSMGAG00000003769	POLR2E	100	95.735	Meleagris_gallopavo
ENSXMAG00000026495	polr2eb	92	95.337	ENSMAUG00000010125	-	100	95.812	Mesocricetus_auratus
ENSXMAG00000026495	polr2eb	100	65.238	ENSMAUG00000011003	-	100	65.238	Mesocricetus_auratus
ENSXMAG00000026495	polr2eb	100	96.190	ENSMICG00000013063	POLR2E	100	96.190	Microcebus_murinus
ENSXMAG00000026495	polr2eb	100	96.190	ENSMOCG00000013414	Polr2e	100	96.190	Microtus_ochrogaster
ENSXMAG00000026495	polr2eb	91	88.482	ENSMMOG00000001167	polr2eb	88	88.482	Mola_mola
ENSXMAG00000026495	polr2eb	100	97.268	ENSMMOG00000001161	polr2eb	100	97.268	Mola_mola
ENSXMAG00000026495	polr2eb	100	96.667	ENSMODG00000005494	POLR2E	100	96.667	Monodelphis_domestica
ENSXMAG00000026495	polr2eb	100	99.524	ENSMALG00000021888	polr2eb	100	99.524	Monopterus_albus
ENSXMAG00000026495	polr2eb	100	96.190	MGP_CAROLIEiJ_G0015561	Polr2e	100	96.190	Mus_caroli
ENSXMAG00000026495	polr2eb	100	96.190	ENSMUSG00000004667	Polr2e	100	96.190	Mus_musculus
ENSXMAG00000026495	polr2eb	100	96.190	MGP_PahariEiJ_G0030974	Polr2e	100	96.190	Mus_pahari
ENSXMAG00000026495	polr2eb	100	96.190	MGP_SPRETEiJ_G0016379	Polr2e	100	96.190	Mus_spretus
ENSXMAG00000026495	polr2eb	100	95.238	ENSMPUG00000008953	POLR2E	100	95.238	Mustela_putorius_furo
ENSXMAG00000026495	polr2eb	100	96.190	ENSMLUG00000013193	POLR2E	100	96.190	Myotis_lucifugus
ENSXMAG00000026495	polr2eb	66	91.304	ENSMLUG00000006376	-	100	80.247	Myotis_lucifugus
ENSXMAG00000026495	polr2eb	100	96.190	ENSNGAG00000001147	Polr2e	100	96.190	Nannospalax_galili
ENSXMAG00000026495	polr2eb	85	73.184	ENSNGAG00000017344	-	96	73.184	Nannospalax_galili
ENSXMAG00000026495	polr2eb	100	100.000	ENSNBRG00000022772	polr2eb	100	100.000	Neolamprologus_brichardi
ENSXMAG00000026495	polr2eb	100	73.333	ENSNLEG00000031364	-	100	73.333	Nomascus_leucogenys
ENSXMAG00000026495	polr2eb	100	92.417	ENSNLEG00000001207	-	100	92.417	Nomascus_leucogenys
ENSXMAG00000026495	polr2eb	100	84.762	ENSOPRG00000008331	POLR2E	100	84.762	Ochotona_princeps
ENSXMAG00000026495	polr2eb	100	71.354	ENSODEG00000011490	-	100	71.354	Octodon_degus
ENSXMAG00000026495	polr2eb	89	85.484	ENSODEG00000007985	-	100	85.484	Octodon_degus
ENSXMAG00000026495	polr2eb	100	96.190	ENSODEG00000013230	-	100	96.190	Octodon_degus
ENSXMAG00000026495	polr2eb	100	99.524	ENSONIG00000002519	polr2eb	100	99.524	Oreochromis_niloticus
ENSXMAG00000026495	polr2eb	100	100.000	ENSORLG00000015346	polr2eb	100	100.000	Oryzias_latipes
ENSXMAG00000026495	polr2eb	100	100.000	ENSORLG00020020700	polr2e	100	100.000	Oryzias_latipes_hni
ENSXMAG00000026495	polr2eb	100	100.000	ENSORLG00015016842	polr2e	100	100.000	Oryzias_latipes_hsok
ENSXMAG00000026495	polr2eb	100	99.524	ENSOMEG00000002709	polr2eb	100	99.524	Oryzias_melastigma
ENSXMAG00000026495	polr2eb	100	96.190	ENSOGAG00000012311	POLR2E	100	96.190	Otolemur_garnettii
ENSXMAG00000026495	polr2eb	100	96.190	ENSOARG00000010994	POLR2E	100	96.190	Ovis_aries
ENSXMAG00000026495	polr2eb	91	95.812	ENSPPAG00000003145	POLR2E	100	95.812	Pan_paniscus
ENSXMAG00000026495	polr2eb	100	95.714	ENSPPRG00000000777	POLR2E	100	95.714	Panthera_pardus
ENSXMAG00000026495	polr2eb	90	86.061	ENSPTIG00000012237	POLR2E	98	90.789	Panthera_tigris_altaica
ENSXMAG00000026495	polr2eb	100	96.190	ENSPTRG00000010183	POLR2E	100	96.190	Pan_troglodytes
ENSXMAG00000026495	polr2eb	100	96.190	ENSPANG00000018011	POLR2E	100	96.190	Papio_anubis
ENSXMAG00000026495	polr2eb	100	98.095	ENSPKIG00000009607	POLR2E	100	98.095	Paramormyrops_kingsleyae
ENSXMAG00000026495	polr2eb	100	98.095	ENSPKIG00000024123	POLR2E	100	98.095	Paramormyrops_kingsleyae
ENSXMAG00000026495	polr2eb	98	92.683	ENSPSIG00000002870	POLR2E	99	92.683	Pelodiscus_sinensis
ENSXMAG00000026495	polr2eb	100	99.454	ENSPMGG00000014354	polr2eb	100	99.454	Periophthalmus_magnuspinnatus
ENSXMAG00000026495	polr2eb	100	96.190	ENSPEMG00000023261	Polr2e	100	96.190	Peromyscus_maniculatus_bairdii
ENSXMAG00000026495	polr2eb	90	96.296	ENSPCIG00000007312	POLR2E	75	96.296	Phascolarctos_cinereus
ENSXMAG00000026495	polr2eb	100	100.000	ENSPFOG00000005734	polr2eb	100	100.000	Poecilia_formosa
ENSXMAG00000026495	polr2eb	100	100.000	ENSPLAG00000014496	polr2eb	100	100.000	Poecilia_latipinna
ENSXMAG00000026495	polr2eb	100	100.000	ENSPMEG00000008053	polr2eb	100	100.000	Poecilia_mexicana
ENSXMAG00000026495	polr2eb	100	100.000	ENSPREG00000006489	polr2eb	100	100.000	Poecilia_reticulata
ENSXMAG00000026495	polr2eb	100	88.626	ENSPPYG00000009305	POLR2E	100	88.626	Pongo_abelii
ENSXMAG00000026495	polr2eb	53	93.694	ENSPCAG00000016605	POLR2E	100	93.694	Procavia_capensis
ENSXMAG00000026495	polr2eb	100	96.190	ENSPCOG00000014491	POLR2E	100	96.190	Propithecus_coquereli
ENSXMAG00000026495	polr2eb	75	100.000	ENSPVAG00000007718	-	65	100.000	Pteropus_vampyrus
ENSXMAG00000026495	polr2eb	90	100.000	ENSPNYG00000019797	polr2eb	96	100.000	Pundamilia_nyererei
ENSXMAG00000026495	polr2eb	100	98.571	ENSPNAG00000026263	POLR2E	100	98.571	Pygocentrus_nattereri
ENSXMAG00000026495	polr2eb	100	96.190	ENSRNOG00000013545	Polr2e	100	96.190	Rattus_norvegicus
ENSXMAG00000026495	polr2eb	100	70.616	ENSRBIG00000027259	-	100	70.616	Rhinopithecus_bieti
ENSXMAG00000026495	polr2eb	100	96.190	ENSRBIG00000028726	-	100	96.190	Rhinopithecus_bieti
ENSXMAG00000026495	polr2eb	100	96.190	ENSRROG00000043763	POLR2E	100	96.190	Rhinopithecus_roxellana
ENSXMAG00000026495	polr2eb	99	45.413	YBR154C	RPB5	98	45.413	Saccharomyces_cerevisiae
ENSXMAG00000026495	polr2eb	100	96.190	ENSSBOG00000027241	POLR2E	100	96.190	Saimiri_boliviensis_boliviensis
ENSXMAG00000026495	polr2eb	100	96.667	ENSSHAG00000010690	POLR2E	100	96.667	Sarcophilus_harrisii
ENSXMAG00000026495	polr2eb	100	99.524	ENSSFOG00015006073	polr2e	100	99.524	Scleropages_formosus
ENSXMAG00000026495	polr2eb	100	99.524	ENSSMAG00000012782	polr2eb	100	99.524	Scophthalmus_maximus
ENSXMAG00000026495	polr2eb	100	99.524	ENSSDUG00000003352	polr2eb	100	99.524	Seriola_dumerili
ENSXMAG00000026495	polr2eb	100	99.524	ENSSLDG00000004965	polr2eb	100	99.524	Seriola_lalandi_dorsalis
ENSXMAG00000026495	polr2eb	100	95.714	ENSSPUG00000006114	POLR2E	100	95.714	Sphenodon_punctatus
ENSXMAG00000026495	polr2eb	100	99.524	ENSSPAG00000017556	polr2eb	100	99.524	Stegastes_partitus
ENSXMAG00000026495	polr2eb	100	96.190	ENSSSCG00000021472	POLR2E	100	96.190	Sus_scrofa
ENSXMAG00000026495	polr2eb	75	85.507	ENSTGUG00000000922	POLR2E	99	88.571	Taeniopygia_guttata
ENSXMAG00000026495	polr2eb	100	99.454	ENSTRUG00000018238	polr2eb	100	99.454	Takifugu_rubripes
ENSXMAG00000026495	polr2eb	100	99.524	ENSTNIG00000013187	polr2eb	100	99.524	Tetraodon_nigroviridis
ENSXMAG00000026495	polr2eb	100	95.714	ENSTTRG00000001484	POLR2E	100	95.714	Tursiops_truncatus
ENSXMAG00000026495	polr2eb	100	95.082	ENSUAMG00000009166	POLR2E	100	95.082	Ursus_americanus
ENSXMAG00000026495	polr2eb	100	96.190	ENSVVUG00000022818	POLR2E	54	96.190	Vulpes_vulpes
ENSXMAG00000026495	polr2eb	100	96.667	ENSXETG00000003291	polr2e	100	96.667	Xenopus_tropicalis
ENSXMAG00000026495	polr2eb	100	100.000	ENSXCOG00000009197	polr2eb	100	100.000	Xiphophorus_couchianus