EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000026576 (Gene tree)
Gene ID: 106699831
Gene Symbol: si:ch211-256m1.8
Alias: -
Full Name: uncharacterized LOC106699831
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Minus strand
Length: 5206 bases
Position: chr16:18743965-18749170
Accession: 106699831
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000036066	tRNA-synt_2	PF00152.20	6.8e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000039357	-	4734	XM_023348363	ENSXMAP00000036066	1577 (aa)	XP_023204131	UPI000C6DE617

Gene Model

Click here to download ENSXMAG00000026576's gene model file

Pathways

Pathway ID	Pathway Name	Source
xma00250	Alanine, aspartate and glutamate metabolism	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000026576's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000026576	si:ch211-256m1.8	100	77.511	ENSAPOG00000007012	si:ch211-256m1.8	100	77.511	Acanthochromis_polyacanthus
ENSXMAG00000026576	si:ch211-256m1.8	100	77.827	ENSAOCG00000012258	si:ch211-256m1.8	100	77.827	Amphiprion_ocellaris
ENSXMAG00000026576	si:ch211-256m1.8	100	77.701	ENSAPEG00000002724	si:ch211-256m1.8	100	77.701	Amphiprion_percula
ENSXMAG00000026576	si:ch211-256m1.8	100	78.269	ENSATEG00000006278	si:ch211-256m1.8	100	78.269	Anabas_testudineus
ENSXMAG00000026576	si:ch211-256m1.8	100	78.016	ENSACLG00000011503	si:ch211-256m1.8	100	78.016	Astatotilapia_calliptera
ENSXMAG00000026576	si:ch211-256m1.8	100	67.649	ENSAMXG00000038245	si:ch211-256m1.8	100	67.649	Astyanax_mexicanus
ENSXMAG00000026576	si:ch211-256m1.8	100	73.631	ENSCSEG00000006255	si:ch211-256m1.8	100	73.631	Cynoglossus_semilaevis
ENSXMAG00000026576	si:ch211-256m1.8	100	87.397	ENSCVAG00000003376	si:ch211-256m1.8	100	87.397	Cyprinodon_variegatus
ENSXMAG00000026576	si:ch211-256m1.8	100	65.552	ENSDARG00000055172	si:ch211-256m1.8	100	65.552	Danio_rerio
ENSXMAG00000026576	si:ch211-256m1.8	100	68.477	ENSELUG00000010546	si:ch211-256m1.8	100	68.477	Esox_lucius
ENSXMAG00000026576	si:ch211-256m1.8	100	86.257	ENSFHEG00000005847	si:ch211-256m1.8	100	86.257	Fundulus_heteroclitus
ENSXMAG00000026576	si:ch211-256m1.8	100	97.464	ENSGAFG00000010269	si:ch211-256m1.8	100	97.464	Gambusia_affinis
ENSXMAG00000026576	si:ch211-256m1.8	100	78.206	ENSHBUG00000014407	si:ch211-256m1.8	100	78.206	Haplochromis_burtoni
ENSXMAG00000026576	si:ch211-256m1.8	100	71.881	ENSHCOG00000006884	si:ch211-256m1.8	100	72.115	Hippocampus_comes
ENSXMAG00000026576	si:ch211-256m1.8	100	65.239	ENSIPUG00000022659	si:ch211-256m1.8	100	65.239	Ictalurus_punctatus
ENSXMAG00000026576	si:ch211-256m1.8	100	81.254	ENSKMAG00000016377	si:ch211-256m1.8	100	81.254	Kryptolebias_marmoratus
ENSXMAG00000026576	si:ch211-256m1.8	100	77.890	ENSLBEG00000010639	si:ch211-256m1.8	100	77.890	Labrus_bergylta
ENSXMAG00000026576	si:ch211-256m1.8	100	59.688	ENSLOCG00000011127	si:ch211-256m1.8	100	59.688	Lepisosteus_oculatus
ENSXMAG00000026576	si:ch211-256m1.8	99	76.982	ENSMAMG00000005651	si:ch211-256m1.8	99	76.982	Mastacembelus_armatus
ENSXMAG00000026576	si:ch211-256m1.8	100	78.080	ENSMZEG00005006924	si:ch211-256m1.8	100	78.080	Maylandia_zebra
ENSXMAG00000026576	si:ch211-256m1.8	100	73.111	ENSMMOG00000001736	si:ch211-256m1.8	100	73.111	Mola_mola
ENSXMAG00000026576	si:ch211-256m1.8	100	78.016	ENSNBRG00000005143	si:ch211-256m1.8	100	78.016	Neolamprologus_brichardi
ENSXMAG00000026576	si:ch211-256m1.8	100	76.582	ENSORLG00000022248	si:ch211-256m1.8	100	76.582	Oryzias_latipes
ENSXMAG00000026576	si:ch211-256m1.8	100	76.329	ENSORLG00020000214	si:ch211-256m1.8	100	76.329	Oryzias_latipes_hni
ENSXMAG00000026576	si:ch211-256m1.8	100	76.251	ENSORLG00015020297	si:ch211-256m1.8	100	76.251	Oryzias_latipes_hsok
ENSXMAG00000026576	si:ch211-256m1.8	100	76.821	ENSOMEG00000004519	si:ch211-256m1.8	100	76.821	Oryzias_melastigma
ENSXMAG00000026576	si:ch211-256m1.8	95	66.913	ENSPKIG00000007399	si:ch211-256m1.8	99	66.913	Paramormyrops_kingsleyae
ENSXMAG00000026576	si:ch211-256m1.8	100	66.225	ENSPMGG00000007698	si:ch211-256m1.8	100	66.225	Periophthalmus_magnuspinnatus
ENSXMAG00000026576	si:ch211-256m1.8	100	95.498	ENSPFOG00000005178	si:ch211-256m1.8	100	95.498	Poecilia_formosa
ENSXMAG00000026576	si:ch211-256m1.8	100	95.371	ENSPLAG00000006872	si:ch211-256m1.8	100	95.371	Poecilia_latipinna
ENSXMAG00000026576	si:ch211-256m1.8	100	95.308	ENSPMEG00000021815	si:ch211-256m1.8	100	95.308	Poecilia_mexicana
ENSXMAG00000026576	si:ch211-256m1.8	100	94.673	ENSPREG00000018669	si:ch211-256m1.8	100	94.673	Poecilia_reticulata
ENSXMAG00000026576	si:ch211-256m1.8	100	78.080	ENSPNYG00000018038	si:ch211-256m1.8	100	78.080	Pundamilia_nyererei
ENSXMAG00000026576	si:ch211-256m1.8	99	66.079	ENSPNAG00000018965	-	99	66.079	Pygocentrus_nattereri
ENSXMAG00000026576	si:ch211-256m1.8	99	67.401	ENSPNAG00000003552	si:ch211-256m1.8	99	67.442	Pygocentrus_nattereri
ENSXMAG00000026576	si:ch211-256m1.8	100	64.569	ENSSFOG00015008344	si:ch211-256m1.8	100	64.569	Scleropages_formosus
ENSXMAG00000026576	si:ch211-256m1.8	100	78.332	ENSSMAG00000007562	si:ch211-256m1.8	100	78.332	Scophthalmus_maximus
ENSXMAG00000026576	si:ch211-256m1.8	100	79.924	ENSSDUG00000018180	si:ch211-256m1.8	100	79.924	Seriola_dumerili
ENSXMAG00000026576	si:ch211-256m1.8	100	80.051	ENSSLDG00000020310	si:ch211-256m1.8	100	80.051	Seriola_lalandi_dorsalis
ENSXMAG00000026576	si:ch211-256m1.8	100	78.332	ENSSPAG00000013419	si:ch211-256m1.8	100	78.332	Stegastes_partitus
ENSXMAG00000026576	si:ch211-256m1.8	100	68.328	ENSTRUG00000023803	si:ch211-256m1.8	100	68.328	Takifugu_rubripes
ENSXMAG00000026576	si:ch211-256m1.8	100	99.112	ENSXCOG00000017726	si:ch211-256m1.8	100	99.112	Xiphophorus_couchianus