EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000026588 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Minus strand
Length: 5087 bases
Position: chr20:27170502-27175588
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000036652	RVT_1	PF00078.27	2.2e-44	1	1
ENSXMAP00000036652	RNase_H	PF00075.24	3.5e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000022399	-	5087	-	ENSXMAP00000036652	1127 (aa)	-	-

Gene Model

Click here to download ENSXMAG00000026588's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000026588's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000026588	-	99	45.948	ENSAMXG00000043500	-	89	45.948	Astyanax_mexicanus
ENSXMAG00000026588	-	99	46.270	ENSDARG00000103436	BX548028.1	90	46.270	Danio_rerio
ENSXMAG00000026588	-	96	47.243	ENSDARG00000103037	CR848788.1	87	47.243	Danio_rerio
ENSXMAG00000026588	-	96	47.373	ENSDARG00000099201	BX908731.1	87	47.373	Danio_rerio
ENSXMAG00000026588	-	75	47.872	ENSKMAG00000012711	-	100	47.872	Kryptolebias_marmoratus
ENSXMAG00000026588	-	99	48.677	ENSKMAG00000003982	-	90	48.677	Kryptolebias_marmoratus
ENSXMAG00000026588	-	99	48.677	ENSKMAG00000004415	-	90	48.677	Kryptolebias_marmoratus
ENSXMAG00000026588	-	71	50.616	ENSKMAG00000021014	-	99	50.616	Kryptolebias_marmoratus
ENSXMAG00000026588	-	99	45.782	ENSORLG00000024423	-	90	45.782	Oryzias_latipes
ENSXMAG00000026588	-	99	45.870	ENSORLG00000027174	-	90	45.870	Oryzias_latipes
ENSXMAG00000026588	-	99	46.046	ENSORLG00000026314	-	90	46.046	Oryzias_latipes
ENSXMAG00000026588	-	99	46.046	ENSORLG00000023592	-	90	46.046	Oryzias_latipes
ENSXMAG00000026588	-	99	46.134	ENSORLG00020020238	-	90	46.134	Oryzias_latipes_hni
ENSXMAG00000026588	-	96	47.225	ENSORLG00020018543	-	87	47.225	Oryzias_latipes_hni
ENSXMAG00000026588	-	76	47.277	ENSORLG00020019901	-	96	47.277	Oryzias_latipes_hni
ENSXMAG00000026588	-	99	46.134	ENSORLG00020011427	-	90	46.134	Oryzias_latipes_hni
ENSXMAG00000026588	-	86	47.658	ENSORLG00015013792	-	89	47.658	Oryzias_latipes_hsok
ENSXMAG00000026588	-	83	48.669	ENSOMEG00000003836	-	86	48.669	Oryzias_melastigma
ENSXMAG00000026588	-	99	55.169	ENSPKIG00000019189	-	89	55.169	Paramormyrops_kingsleyae
ENSXMAG00000026588	-	95	48.887	ENSXMAG00000028309	-	90	48.004	Xiphophorus_maculatus
ENSXMAG00000026588	-	77	48.727	ENSXMAG00000020874	-	95	48.727	Xiphophorus_maculatus
ENSXMAG00000026588	-	67	42.460	ENSXMAG00000025430	-	99	42.460	Xiphophorus_maculatus
ENSXMAG00000026588	-	91	47.260	ENSXMAG00000023078	-	99	47.260	Xiphophorus_maculatus
ENSXMAG00000026588	-	95	49.072	ENSXMAG00000021755	-	90	48.181	Xiphophorus_maculatus
ENSXMAG00000026588	-	91	47.065	ENSXMAG00000029923	-	99	47.065	Xiphophorus_maculatus
ENSXMAG00000026588	-	70	48.601	ENSXMAG00000023377	-	100	48.601	Xiphophorus_maculatus
ENSXMAG00000026588	-	100	100.000	ENSXMAG00000022223	-	100	100.000	Xiphophorus_maculatus
ENSXMAG00000026588	-	99	47.489	ENSXMAG00000029466	-	97	47.489	Xiphophorus_maculatus
ENSXMAG00000026588	-	99	47.336	ENSXMAG00000021061	-	90	47.336	Xiphophorus_maculatus
ENSXMAG00000026588	-	91	46.869	ENSXMAG00000027130	-	99	46.869	Xiphophorus_maculatus
ENSXMAG00000026588	-	95	49.072	ENSXMAG00000021070	-	90	48.181	Xiphophorus_maculatus
ENSXMAG00000026588	-	100	100.000	ENSXMAG00000026248	-	100	100.000	Xiphophorus_maculatus
ENSXMAG00000026588	-	78	47.598	ENSXMAG00000024143	-	99	47.598	Xiphophorus_maculatus
ENSXMAG00000026588	-	71	49.315	ENSXMAG00000023126	-	99	49.315	Xiphophorus_maculatus