EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000026836 (Gene tree)
Gene ID: 102223055
Gene Symbol: zgc:114130
Alias: fb92b09|wu:fb92b09
Full Name: mRNA decay activator protein ZFP36L1-like
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Minus strand
Length: 8528 bases
Position: chr18:19324907-19333434
Accession: 102223055
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000023132	zf-CCCH	PF00642.24	2.8e-20	1	2
ENSXMAP00000023132	zf-CCCH	PF00642.24	2.8e-20	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000021620	-	5497	XM_014472500	ENSXMAP00000023132	430 (aa)	XP_014327986	M4AUU4

Gene Model

Click here to download ENSXMAG00000026836's gene model file

Pathways

Pathway ID	Pathway Name	Source
xma04218	Cellular senescence	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000026836's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000026836	zgc:114130	100	69.178	ENSAPOG00000014912	zgc:114130	98	69.178	Acanthochromis_polyacanthus
ENSXMAG00000026836	zgc:114130	83	66.851	ENSACIG00000017364	zgc:114130	96	67.123	Amphilophus_citrinellus
ENSXMAG00000026836	zgc:114130	100	68.721	ENSAOCG00000022227	zgc:114130	98	68.721	Amphiprion_ocellaris
ENSXMAG00000026836	zgc:114130	100	69.178	ENSAPEG00000015497	zgc:114130	98	69.178	Amphiprion_percula
ENSXMAG00000026836	zgc:114130	100	67.654	ENSATEG00000008781	zgc:114130	98	66.743	Anabas_testudineus
ENSXMAG00000026836	zgc:114130	100	65.517	ENSACLG00000022113	zgc:114130	98	65.747	Astatotilapia_calliptera
ENSXMAG00000026836	zgc:114130	73	38.253	ENSAMXG00000034874	sb:cb81	73	38.369	Astyanax_mexicanus
ENSXMAG00000026836	zgc:114130	100	43.016	ENSAMXG00000038581	zgc:114130	95	41.518	Astyanax_mexicanus
ENSXMAG00000026836	zgc:114130	100	59.368	ENSCSEG00000018290	zgc:114130	98	59.184	Cynoglossus_semilaevis
ENSXMAG00000026836	zgc:114130	100	78.605	ENSCVAG00000018574	zgc:114130	100	78.140	Cyprinodon_variegatus
ENSXMAG00000026836	zgc:114130	100	46.154	ENSDARG00000040725	zgc:114130	96	45.309	Danio_rerio
ENSXMAG00000026836	zgc:114130	99	35.763	ENSDARG00000040503	sb:cb81	99	36.073	Danio_rerio
ENSXMAG00000026836	zgc:114130	99	35.463	ENSELUG00000013045	sb:cb81	73	36.858	Esox_lucius
ENSXMAG00000026836	zgc:114130	100	46.742	ENSELUG00000013151	zgc:114130	97	46.925	Esox_lucius
ENSXMAG00000026836	zgc:114130	100	75.463	ENSFHEG00000000656	zgc:114130	100	78.009	Fundulus_heteroclitus
ENSXMAG00000026836	zgc:114130	79	52.770	ENSGMOG00000017223	zgc:114130	99	52.174	Gadus_morhua
ENSXMAG00000026836	zgc:114130	81	89.143	ENSGAFG00000009949	zgc:114130	93	88.571	Gambusia_affinis
ENSXMAG00000026836	zgc:114130	79	66.962	ENSGACG00000008344	zgc:114130	99	66.765	Gasterosteus_aculeatus
ENSXMAG00000026836	zgc:114130	100	66.437	ENSHBUG00000015051	zgc:114130	98	66.897	Haplochromis_burtoni
ENSXMAG00000026836	zgc:114130	100	56.813	ENSHCOG00000015800	zgc:114130	96	55.275	Hippocampus_comes
ENSXMAG00000026836	zgc:114130	62	39.051	ENSIPUG00000011378	sb:cb81	68	36.299	Ictalurus_punctatus
ENSXMAG00000026836	zgc:114130	100	40.878	ENSIPUG00000018256	zgc:114130	79	38.889	Ictalurus_punctatus
ENSXMAG00000026836	zgc:114130	100	68.934	ENSKMAG00000019287	zgc:114130	98	68.778	Kryptolebias_marmoratus
ENSXMAG00000026836	zgc:114130	100	60.739	ENSLBEG00000018387	zgc:114130	98	60.508	Labrus_bergylta
ENSXMAG00000026836	zgc:114130	99	37.330	ENSLACG00000015732	sb:cb81	99	34.889	Latimeria_chalumnae
ENSXMAG00000026836	zgc:114130	73	37.202	ENSLOCG00000014587	sb:cb81	74	37.719	Lepisosteus_oculatus
ENSXMAG00000026836	zgc:114130	100	64.434	ENSMAMG00000007511	zgc:114130	96	65.820	Mastacembelus_armatus
ENSXMAG00000026836	zgc:114130	50	40.183	ENSMZEG00005014415	zgc:162730	60	37.500	Maylandia_zebra
ENSXMAG00000026836	zgc:114130	100	65.747	ENSMZEG00005014410	zgc:114130	98	65.977	Maylandia_zebra
ENSXMAG00000026836	zgc:114130	84	66.667	ENSMMOG00000011504	zgc:114130	96	67.486	Mola_mola
ENSXMAG00000026836	zgc:114130	80	64.928	ENSNBRG00000013703	zgc:114130	94	63.768	Neolamprologus_brichardi
ENSXMAG00000026836	zgc:114130	79	64.928	ENSONIG00000005004	zgc:114130	99	65.797	Oreochromis_niloticus
ENSXMAG00000026836	zgc:114130	100	93.072	ENSPFOG00000003653	zgc:114130	100	93.995	Poecilia_formosa
ENSXMAG00000026836	zgc:114130	100	94.664	ENSPLAG00000000947	zgc:114130	100	95.128	Poecilia_latipinna
ENSXMAG00000026836	zgc:114130	100	90.993	ENSPMEG00000015335	zgc:114130	100	91.917	Poecilia_mexicana
ENSXMAG00000026836	zgc:114130	100	93.968	ENSPREG00000021254	zgc:114130	100	93.968	Poecilia_reticulata
ENSXMAG00000026836	zgc:114130	64	36.054	ENSPREG00000017495	sb:cb81	71	35.443	Poecilia_reticulata
ENSXMAG00000026836	zgc:114130	100	65.287	ENSPNYG00000015546	zgc:114130	98	65.517	Pundamilia_nyererei
ENSXMAG00000026836	zgc:114130	100	39.509	ENSPNAG00000023029	zgc:114130	96	40.308	Pygocentrus_nattereri
ENSXMAG00000026836	zgc:114130	66	37.282	ENSSFOG00015003179	sb:cb81	99	30.000	Scleropages_formosus
ENSXMAG00000026836	zgc:114130	100	62.785	ENSSMAG00000018621	zgc:114130	95	63.470	Scophthalmus_maximus
ENSXMAG00000026836	zgc:114130	100	68.037	ENSSDUG00000002237	zgc:114130	100	66.443	Seriola_dumerili
ENSXMAG00000026836	zgc:114130	100	67.580	ENSSLDG00000008496	zgc:114130	100	65.996	Seriola_lalandi_dorsalis
ENSXMAG00000026836	zgc:114130	100	68.276	ENSSPAG00000006856	zgc:114130	98	68.506	Stegastes_partitus
ENSXMAG00000026836	zgc:114130	99	35.398	ENSTRUG00000020720	sb:cb81	65	38.644	Takifugu_rubripes
ENSXMAG00000026836	zgc:114130	100	59.862	ENSTRUG00000022473	zgc:114130	98	60.502	Takifugu_rubripes
ENSXMAG00000026836	zgc:114130	91	78.462	ENSXCOG00000012792	zgc:114130	96	78.462	Xiphophorus_couchianus