EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000027071 (Gene tree)
Gene ID: 102226911
Gene Symbol: rab11al
Alias: fc54g10|wu:fc54g10|zgc:63565
Full Name: ras-related protein Rab-11A
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 13349 bases
Position: chr3:12090514-12103862
Accession: 102226911
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000028105	MMR_HSR1	PF01926.23	4e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000040157	-	3302	XM_005801807	ENSXMAP00000028105	216 (aa)	XP_005801864	UPI000293AA44

Gene Model

Click here to download ENSXMAG00000027071's gene model file

Pathways

Pathway ID	Pathway Name	Source
xma04144	Endocytosis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000027071's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000027071	rab11al	100	93.056	ENSAPOG00000008251	rab11al	100	93.056	Acanthochromis_polyacanthus
ENSXMAG00000027071	rab11al	100	93.056	ENSACIG00000017403	rab11al	100	93.056	Amphilophus_citrinellus
ENSXMAG00000027071	rab11al	100	92.593	ENSAOCG00000015678	rab11al	100	92.593	Amphiprion_ocellaris
ENSXMAG00000027071	rab11al	100	92.593	ENSAPEG00000022135	rab11al	100	92.593	Amphiprion_percula
ENSXMAG00000027071	rab11al	100	91.667	ENSATEG00000006156	rab11al	100	91.667	Anabas_testudineus
ENSXMAG00000027071	rab11al	100	93.056	ENSACLG00000010268	rab11al	100	93.056	Astatotilapia_calliptera
ENSXMAG00000027071	rab11al	94	85.714	ENSAMXG00000024632	rab11al	93	85.714	Astyanax_mexicanus
ENSXMAG00000027071	rab11al	94	81.188	ENSCPBG00000025819	-	99	81.188	Chrysemys_picta_bellii
ENSXMAG00000027071	rab11al	100	93.519	ENSCSEG00000011996	rab11al	100	93.519	Cynoglossus_semilaevis
ENSXMAG00000027071	rab11al	100	97.685	ENSCVAG00000020016	rab11al	100	97.685	Cyprinodon_variegatus
ENSXMAG00000027071	rab11al	100	89.352	ENSDARG00000014340	rab11al	100	89.352	Danio_rerio
ENSXMAG00000027071	rab11al	100	90.741	ENSELUG00000012035	rab11al	100	90.741	Esox_lucius
ENSXMAG00000027071	rab11al	99	81.395	ENSFALG00000002594	-	91	81.395	Ficedula_albicollis
ENSXMAG00000027071	rab11al	96	97.596	ENSFHEG00000000832	rab11al	99	97.596	Fundulus_heteroclitus
ENSXMAG00000027071	rab11al	94	87.129	ENSGMOG00000006450	rab11al	100	87.129	Gadus_morhua
ENSXMAG00000027071	rab11al	99	79.535	ENSGALG00000037802	-	50	79.535	Gallus_gallus
ENSXMAG00000027071	rab11al	100	99.074	ENSGAFG00000021725	rab11al	100	99.074	Gambusia_affinis
ENSXMAG00000027071	rab11al	100	91.667	ENSGACG00000013259	rab11al	100	91.667	Gasterosteus_aculeatus
ENSXMAG00000027071	rab11al	99	81.860	ENSGAGG00000020702	-	99	81.860	Gopherus_agassizii
ENSXMAG00000027071	rab11al	100	93.056	ENSHBUG00000009333	rab11al	100	93.056	Haplochromis_burtoni
ENSXMAG00000027071	rab11al	100	93.056	ENSHCOG00000000232	rab11al	100	93.056	Hippocampus_comes
ENSXMAG00000027071	rab11al	100	91.204	ENSIPUG00000006091	RAB11A	100	91.204	Ictalurus_punctatus
ENSXMAG00000027071	rab11al	100	88.889	ENSKMAG00000015516	rab11al	100	88.889	Kryptolebias_marmoratus
ENSXMAG00000027071	rab11al	100	92.130	ENSLBEG00000016417	rab11al	100	92.130	Labrus_bergylta
ENSXMAG00000027071	rab11al	99	80.000	ENSLACG00000011380	rab11al	99	80.000	Latimeria_chalumnae
ENSXMAG00000027071	rab11al	100	89.815	ENSLOCG00000008865	rab11al	100	89.815	Lepisosteus_oculatus
ENSXMAG00000027071	rab11al	100	93.981	ENSMAMG00000010278	rab11al	100	93.981	Mastacembelus_armatus
ENSXMAG00000027071	rab11al	100	93.056	ENSMZEG00005017514	rab11al	100	93.056	Maylandia_zebra
ENSXMAG00000027071	rab11al	75	90.062	ENSMGAG00000004720	-	95	90.062	Meleagris_gallopavo
ENSXMAG00000027071	rab11al	79	95.906	ENSMMOG00000017117	rab11al	84	95.906	Mola_mola
ENSXMAG00000027071	rab11al	100	92.593	ENSMALG00000004093	rab11al	100	92.593	Monopterus_albus
ENSXMAG00000027071	rab11al	100	93.056	ENSNBRG00000005116	rab11al	100	93.056	Neolamprologus_brichardi
ENSXMAG00000027071	rab11al	100	93.519	ENSONIG00000002281	rab11al	100	93.519	Oreochromis_niloticus
ENSXMAG00000027071	rab11al	100	93.519	ENSORLG00000016126	rab11al	100	93.519	Oryzias_latipes
ENSXMAG00000027071	rab11al	100	93.519	ENSORLG00020013747	rab11al	100	93.519	Oryzias_latipes_hni
ENSXMAG00000027071	rab11al	100	93.519	ENSORLG00015019591	rab11al	100	93.519	Oryzias_latipes_hsok
ENSXMAG00000027071	rab11al	100	92.130	ENSOMEG00000020271	rab11al	100	92.130	Oryzias_melastigma
ENSXMAG00000027071	rab11al	100	88.426	ENSPKIG00000020893	rab11al	100	88.426	Paramormyrops_kingsleyae
ENSXMAG00000027071	rab11al	99	80.465	ENSPSIG00000013143	-	99	80.465	Pelodiscus_sinensis
ENSXMAG00000027071	rab11al	100	88.426	ENSPMGG00000004220	rab11al	100	88.426	Periophthalmus_magnuspinnatus
ENSXMAG00000027071	rab11al	100	99.074	ENSPFOG00000011316	rab11al	100	99.074	Poecilia_formosa
ENSXMAG00000027071	rab11al	100	99.074	ENSPLAG00000007986	rab11al	100	99.074	Poecilia_latipinna
ENSXMAG00000027071	rab11al	100	99.074	ENSPMEG00000000804	rab11al	100	99.074	Poecilia_mexicana
ENSXMAG00000027071	rab11al	100	98.611	ENSPREG00000017324	rab11al	100	98.611	Poecilia_reticulata
ENSXMAG00000027071	rab11al	100	93.056	ENSPNYG00000018244	rab11al	100	93.056	Pundamilia_nyererei
ENSXMAG00000027071	rab11al	100	90.278	ENSPNAG00000029085	rab11al	100	90.278	Pygocentrus_nattereri
ENSXMAG00000027071	rab11al	100	90.278	ENSSFOG00015008618	rab11al	100	90.278	Scleropages_formosus
ENSXMAG00000027071	rab11al	100	91.667	ENSSMAG00000016206	rab11al	100	91.667	Scophthalmus_maximus
ENSXMAG00000027071	rab11al	100	92.593	ENSSDUG00000006278	rab11al	100	92.593	Seriola_dumerili
ENSXMAG00000027071	rab11al	100	92.593	ENSSLDG00000012116	rab11al	100	92.593	Seriola_lalandi_dorsalis
ENSXMAG00000027071	rab11al	99	78.241	ENSSPUG00000002526	-	99	78.241	Sphenodon_punctatus
ENSXMAG00000027071	rab11al	100	92.130	ENSSPAG00000012044	rab11al	100	92.130	Stegastes_partitus
ENSXMAG00000027071	rab11al	94	84.653	ENSTGUG00000003680	-	99	84.653	Taeniopygia_guttata
ENSXMAG00000027071	rab11al	99	91.549	ENSTRUG00000007556	rab11al	99	91.549	Takifugu_rubripes
ENSXMAG00000027071	rab11al	100	100.000	ENSXCOG00000004226	rab11al	100	100.000	Xiphophorus_couchianus