EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000027119 (Gene tree)
Gene ID: 102222218
Gene Symbol: si:dkey-17e16.10
Alias: -
Full Name: mitochondrial ribosomal protein S12
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 3920 bases
Position: chr3:712625-716544
Accession: 102222218
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000021977	Ribosom_S12_S23	PF00164.25	2.7e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000041444	-	3279	XM_005814108	ENSXMAP00000021977	142 (aa)	XP_005814165	M4AER3

Gene Model

Click here to download ENSXMAG00000027119's gene model file

Pathways

Pathway ID	Pathway Name	Source
xma03010	Ribosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000027119's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000027119	si:dkey-17e16.10	77	80.000	ENSG00000128626	MRPS12	80	80.000	Homo_sapiens
ENSXMAG00000027119	si:dkey-17e16.10	99	88.652	ENSAPOG00000005047	si:dkey-17e16.10	99	88.652	Acanthochromis_polyacanthus
ENSXMAG00000027119	si:dkey-17e16.10	80	81.416	ENSAMEG00000008722	MRPS12	81	81.416	Ailuropoda_melanoleuca
ENSXMAG00000027119	si:dkey-17e16.10	99	90.000	ENSACIG00000016095	si:dkey-17e16.10	98	90.000	Amphilophus_citrinellus
ENSXMAG00000027119	si:dkey-17e16.10	99	87.234	ENSAOCG00000018530	si:dkey-17e16.10	99	87.234	Amphiprion_ocellaris
ENSXMAG00000027119	si:dkey-17e16.10	99	87.234	ENSAPEG00000019785	si:dkey-17e16.10	99	87.234	Amphiprion_percula
ENSXMAG00000027119	si:dkey-17e16.10	99	88.652	ENSATEG00000018924	si:dkey-17e16.10	99	88.652	Anabas_testudineus
ENSXMAG00000027119	si:dkey-17e16.10	77	75.229	ENSAPLG00000014350	-	73	75.229	Anas_platyrhynchos
ENSXMAG00000027119	si:dkey-17e16.10	77	82.727	ENSAPLG00000011925	-	79	82.727	Anas_platyrhynchos
ENSXMAG00000027119	si:dkey-17e16.10	77	84.545	ENSACAG00000003829	MRPS12	76	84.545	Anolis_carolinensis
ENSXMAG00000027119	si:dkey-17e16.10	78	81.081	ENSANAG00000033654	MRPS12	80	81.081	Aotus_nancymaae
ENSXMAG00000027119	si:dkey-17e16.10	99	91.489	ENSACLG00000013979	si:dkey-17e16.10	93	91.489	Astatotilapia_calliptera
ENSXMAG00000027119	si:dkey-17e16.10	99	72.727	ENSAMXG00000025945	si:dkey-17e16.10	98	72.727	Astyanax_mexicanus
ENSXMAG00000027119	si:dkey-17e16.10	82	79.310	ENSBTAG00000001782	MRPS12	83	79.310	Bos_taurus
ENSXMAG00000027119	si:dkey-17e16.10	68	58.586	WBGene00011391	mrps-12	63	58.586	Caenorhabditis_elegans
ENSXMAG00000027119	si:dkey-17e16.10	78	81.081	ENSCJAG00000043176	MRPS12	80	81.081	Callithrix_jacchus
ENSXMAG00000027119	si:dkey-17e16.10	97	73.050	ENSCAFG00000005623	MRPS12	85	79.508	Canis_familiaris
ENSXMAG00000027119	si:dkey-17e16.10	97	73.050	ENSCAFG00020016784	MRPS12	85	79.508	Canis_lupus_dingo
ENSXMAG00000027119	si:dkey-17e16.10	82	79.310	ENSCHIG00000013852	MRPS12	83	79.310	Capra_hircus
ENSXMAG00000027119	si:dkey-17e16.10	79	82.143	ENSTSYG00000009568	MRPS12	81	82.143	Carlito_syrichta
ENSXMAG00000027119	si:dkey-17e16.10	80	81.416	ENSCAPG00000009543	MRPS12	83	81.416	Cavia_aperea
ENSXMAG00000027119	si:dkey-17e16.10	80	81.416	ENSCPOG00000035217	MRPS12	81	81.416	Cavia_porcellus
ENSXMAG00000027119	si:dkey-17e16.10	77	80.000	ENSCCAG00000035388	MRPS12	80	80.000	Cebus_capucinus
ENSXMAG00000027119	si:dkey-17e16.10	78	80.180	ENSCATG00000038438	MRPS12	80	80.180	Cercocebus_atys
ENSXMAG00000027119	si:dkey-17e16.10	79	81.250	ENSCLAG00000013286	MRPS12	81	81.250	Chinchilla_lanigera
ENSXMAG00000027119	si:dkey-17e16.10	77	80.909	ENSCSAG00000003929	MRPS12	79	80.909	Chlorocebus_sabaeus
ENSXMAG00000027119	si:dkey-17e16.10	61	84.884	ENSCHOG00000008451	MRPS12	62	84.884	Choloepus_hoffmanni
ENSXMAG00000027119	si:dkey-17e16.10	96	73.050	ENSCPBG00000018941	MRPS12	90	73.050	Chrysemys_picta_bellii
ENSXMAG00000027119	si:dkey-17e16.10	70	61.616	ENSCSAVG00000008777	-	52	61.616	Ciona_savignyi
ENSXMAG00000027119	si:dkey-17e16.10	78	80.180	ENSCANG00000003652	MRPS12	80	80.180	Colobus_angolensis_palliatus
ENSXMAG00000027119	si:dkey-17e16.10	82	78.151	ENSCGRG00001018968	Mrps12	86	78.151	Cricetulus_griseus_chok1gshd
ENSXMAG00000027119	si:dkey-17e16.10	82	78.151	ENSCGRG00000007113	Mrps12	86	78.151	Cricetulus_griseus_crigri
ENSXMAG00000027119	si:dkey-17e16.10	100	83.803	ENSCSEG00000001174	si:dkey-17e16.10	99	83.803	Cynoglossus_semilaevis
ENSXMAG00000027119	si:dkey-17e16.10	99	92.908	ENSCVAG00000003253	si:dkey-17e16.10	99	92.908	Cyprinodon_variegatus
ENSXMAG00000027119	si:dkey-17e16.10	99	79.286	ENSDARG00000089836	MRPS12	98	79.286	Danio_rerio
ENSXMAG00000027119	si:dkey-17e16.10	80	83.186	ENSDNOG00000003918	MRPS12	81	83.186	Dasypus_novemcinctus
ENSXMAG00000027119	si:dkey-17e16.10	80	78.947	ENSDORG00000001544	Mrps12	82	78.947	Dipodomys_ordii
ENSXMAG00000027119	si:dkey-17e16.10	80	64.655	FBgn0003714	tko	81	64.655	Drosophila_melanogaster
ENSXMAG00000027119	si:dkey-17e16.10	80	82.301	ENSETEG00000017985	MRPS12	81	82.301	Echinops_telfairi
ENSXMAG00000027119	si:dkey-17e16.10	79	85.714	ENSEBUG00000003529	si:dkey-17e16.10	64	85.714	Eptatretus_burgeri
ENSXMAG00000027119	si:dkey-17e16.10	80	82.301	ENSEASG00005019736	MRPS12	81	82.301	Equus_asinus_asinus
ENSXMAG00000027119	si:dkey-17e16.10	80	82.301	ENSECAG00000013794	MRPS12	81	82.301	Equus_caballus
ENSXMAG00000027119	si:dkey-17e16.10	50	69.014	ENSEEUG00000013868	MRPS12	75	69.014	Erinaceus_europaeus
ENSXMAG00000027119	si:dkey-17e16.10	99	85.000	ENSELUG00000014973	si:dkey-17e16.10	97	85.000	Esox_lucius
ENSXMAG00000027119	si:dkey-17e16.10	80	79.646	ENSFCAG00000014573	MRPS12	81	79.646	Felis_catus
ENSXMAG00000027119	si:dkey-17e16.10	77	77.982	ENSFALG00000015276	MRPS12	95	77.982	Ficedula_albicollis
ENSXMAG00000027119	si:dkey-17e16.10	80	78.761	ENSFDAG00000008482	MRPS12	81	78.761	Fukomys_damarensis
ENSXMAG00000027119	si:dkey-17e16.10	99	92.199	ENSFHEG00000004575	si:dkey-17e16.10	99	92.199	Fundulus_heteroclitus
ENSXMAG00000027119	si:dkey-17e16.10	78	96.396	ENSGMOG00000020611	si:dkey-17e16.10	100	96.396	Gadus_morhua
ENSXMAG00000027119	si:dkey-17e16.10	91	72.932	ENSGALG00000038667	MRPS12	98	73.485	Gallus_gallus
ENSXMAG00000027119	si:dkey-17e16.10	100	98.592	ENSGAFG00000007521	si:dkey-17e16.10	100	98.592	Gambusia_affinis
ENSXMAG00000027119	si:dkey-17e16.10	78	95.495	ENSGACG00000003011	si:dkey-17e16.10	100	95.495	Gasterosteus_aculeatus
ENSXMAG00000027119	si:dkey-17e16.10	82	84.483	ENSGAGG00000009748	MRPS12	74	84.483	Gopherus_agassizii
ENSXMAG00000027119	si:dkey-17e16.10	77	80.000	ENSGGOG00000002500	MRPS12	80	80.000	Gorilla_gorilla
ENSXMAG00000027119	si:dkey-17e16.10	99	90.780	ENSHBUG00000014480	si:dkey-17e16.10	99	90.780	Haplochromis_burtoni
ENSXMAG00000027119	si:dkey-17e16.10	80	76.316	ENSHGLG00000014942	MRPS12	81	76.316	Heterocephalus_glaber_female
ENSXMAG00000027119	si:dkey-17e16.10	80	76.316	ENSHGLG00100017710	MRPS12	81	76.316	Heterocephalus_glaber_male
ENSXMAG00000027119	si:dkey-17e16.10	94	81.343	ENSHCOG00000010444	si:dkey-17e16.10	89	81.343	Hippocampus_comes
ENSXMAG00000027119	si:dkey-17e16.10	99	85.000	ENSIPUG00000024651	MRPS12	98	85.000	Ictalurus_punctatus
ENSXMAG00000027119	si:dkey-17e16.10	80	82.301	ENSSTOG00000009006	MRPS12	81	82.301	Ictidomys_tridecemlineatus
ENSXMAG00000027119	si:dkey-17e16.10	80	78.761	ENSJJAG00000017837	Mrps12	81	78.761	Jaculus_jaculus
ENSXMAG00000027119	si:dkey-17e16.10	100	87.324	ENSKMAG00000007949	si:dkey-17e16.10	90	87.324	Kryptolebias_marmoratus
ENSXMAG00000027119	si:dkey-17e16.10	85	94.215	ENSLBEG00000001112	si:dkey-17e16.10	86	94.215	Labrus_bergylta
ENSXMAG00000027119	si:dkey-17e16.10	80	87.611	ENSLACG00000018393	MRPS12	71	87.611	Latimeria_chalumnae
ENSXMAG00000027119	si:dkey-17e16.10	99	72.222	ENSLOCG00000000535	si:dkey-17e16.10	98	72.222	Lepisosteus_oculatus
ENSXMAG00000027119	si:dkey-17e16.10	80	77.876	ENSLAFG00000022140	MRPS12	81	77.876	Loxodonta_africana
ENSXMAG00000027119	si:dkey-17e16.10	78	81.081	ENSMFAG00000044563	MRPS12	80	81.081	Macaca_fascicularis
ENSXMAG00000027119	si:dkey-17e16.10	78	80.180	ENSMNEG00000040379	MRPS12	80	80.180	Macaca_nemestrina
ENSXMAG00000027119	si:dkey-17e16.10	78	80.180	ENSMLEG00000036963	MRPS12	80	80.180	Mandrillus_leucophaeus
ENSXMAG00000027119	si:dkey-17e16.10	99	88.652	ENSMAMG00000017962	si:dkey-17e16.10	99	88.652	Mastacembelus_armatus
ENSXMAG00000027119	si:dkey-17e16.10	100	90.845	ENSMZEG00005017336	si:dkey-17e16.10	99	90.845	Maylandia_zebra
ENSXMAG00000027119	si:dkey-17e16.10	78	81.982	ENSMGAG00000005414	MRPS12	78	81.982	Meleagris_gallopavo
ENSXMAG00000027119	si:dkey-17e16.10	57	78.313	ENSMAUG00000019146	Mrps12	81	78.313	Mesocricetus_auratus
ENSXMAG00000027119	si:dkey-17e16.10	80	81.416	ENSMICG00000045111	MRPS12	81	81.416	Microcebus_murinus
ENSXMAG00000027119	si:dkey-17e16.10	82	80.508	ENSMOCG00000012666	Mrps12	88	80.508	Microtus_ochrogaster
ENSXMAG00000027119	si:dkey-17e16.10	92	86.260	ENSMMOG00000010803	si:dkey-17e16.10	87	86.260	Mola_mola
ENSXMAG00000027119	si:dkey-17e16.10	96	68.613	ENSMODG00000013431	MRPS12	92	68.613	Monodelphis_domestica
ENSXMAG00000027119	si:dkey-17e16.10	99	87.943	ENSMALG00000004190	si:dkey-17e16.10	99	87.943	Monopterus_albus
ENSXMAG00000027119	si:dkey-17e16.10	80	81.416	MGP_CAROLIEiJ_G0029457	Mrps12	85	82.075	Mus_caroli
ENSXMAG00000027119	si:dkey-17e16.10	80	81.416	ENSMUSG00000045948	Mrps12	85	82.075	Mus_musculus
ENSXMAG00000027119	si:dkey-17e16.10	80	80.531	MGP_PahariEiJ_G0012691	Mrps12	85	81.132	Mus_pahari
ENSXMAG00000027119	si:dkey-17e16.10	80	81.416	MGP_SPRETEiJ_G0030553	Mrps12	85	82.075	Mus_spretus
ENSXMAG00000027119	si:dkey-17e16.10	91	74.419	ENSMPUG00000017750	MRPS12	96	74.419	Mustela_putorius_furo
ENSXMAG00000027119	si:dkey-17e16.10	80	81.416	ENSMLUG00000006076	MRPS12	81	81.416	Myotis_lucifugus
ENSXMAG00000027119	si:dkey-17e16.10	80	82.301	ENSNGAG00000022099	Mrps12	81	82.301	Nannospalax_galili
ENSXMAG00000027119	si:dkey-17e16.10	99	91.489	ENSNBRG00000007244	si:dkey-17e16.10	99	91.489	Neolamprologus_brichardi
ENSXMAG00000027119	si:dkey-17e16.10	78	73.874	ENSMEUG00000005688	MRPS12	99	73.874	Notamacropus_eugenii
ENSXMAG00000027119	si:dkey-17e16.10	80	80.531	ENSODEG00000016161	MRPS12	86	80.531	Octodon_degus
ENSXMAG00000027119	si:dkey-17e16.10	99	90.780	ENSONIG00000002022	si:dkey-17e16.10	99	90.780	Oreochromis_niloticus
ENSXMAG00000027119	si:dkey-17e16.10	79	81.250	ENSOCUG00000000689	MRPS12	81	81.250	Oryctolagus_cuniculus
ENSXMAG00000027119	si:dkey-17e16.10	99	89.362	ENSORLG00000007040	si:dkey-17e16.10	99	89.362	Oryzias_latipes
ENSXMAG00000027119	si:dkey-17e16.10	99	89.362	ENSORLG00020011268	MRPS12	99	89.362	Oryzias_latipes_hni
ENSXMAG00000027119	si:dkey-17e16.10	99	89.362	ENSORLG00015009378	MRPS12	99	89.362	Oryzias_latipes_hsok
ENSXMAG00000027119	si:dkey-17e16.10	99	88.652	ENSOMEG00000001427	si:dkey-17e16.10	99	88.652	Oryzias_melastigma
ENSXMAG00000027119	si:dkey-17e16.10	80	82.301	ENSOGAG00000008295	-	81	82.301	Otolemur_garnettii
ENSXMAG00000027119	si:dkey-17e16.10	80	74.336	ENSOGAG00000025634	-	81	74.336	Otolemur_garnettii
ENSXMAG00000027119	si:dkey-17e16.10	82	79.310	ENSOARG00000005927	MRPS12	83	79.310	Ovis_aries
ENSXMAG00000027119	si:dkey-17e16.10	77	80.000	ENSPPAG00000041637	MRPS12	80	80.000	Pan_paniscus
ENSXMAG00000027119	si:dkey-17e16.10	80	79.646	ENSPPRG00000011742	MRPS12	81	79.646	Panthera_pardus
ENSXMAG00000027119	si:dkey-17e16.10	62	84.091	ENSPTIG00000008427	MRPS12	99	69.919	Panthera_tigris_altaica
ENSXMAG00000027119	si:dkey-17e16.10	77	80.000	ENSPTRG00000010948	MRPS12	80	80.000	Pan_troglodytes
ENSXMAG00000027119	si:dkey-17e16.10	78	80.180	ENSPANG00000021673	MRPS12	80	80.180	Papio_anubis
ENSXMAG00000027119	si:dkey-17e16.10	99	78.723	ENSPKIG00000006716	si:dkey-17e16.10	99	78.723	Paramormyrops_kingsleyae
ENSXMAG00000027119	si:dkey-17e16.10	82	84.615	ENSPSIG00000014383	MRPS12	76	84.615	Pelodiscus_sinensis
ENSXMAG00000027119	si:dkey-17e16.10	100	80.420	ENSPMGG00000009631	si:dkey-17e16.10	99	80.420	Periophthalmus_magnuspinnatus
ENSXMAG00000027119	si:dkey-17e16.10	82	79.832	ENSPEMG00000016700	Mrps12	86	79.832	Peromyscus_maniculatus_bairdii
ENSXMAG00000027119	si:dkey-17e16.10	81	73.913	ENSPMAG00000008051	si:dkey-17e16.10	74	73.913	Petromyzon_marinus
ENSXMAG00000027119	si:dkey-17e16.10	77	80.000	ENSPCIG00000010531	-	78	80.000	Phascolarctos_cinereus
ENSXMAG00000027119	si:dkey-17e16.10	99	95.745	ENSPFOG00000018863	si:dkey-17e16.10	99	95.745	Poecilia_formosa
ENSXMAG00000027119	si:dkey-17e16.10	99	95.745	ENSPLAG00000008933	si:dkey-17e16.10	99	95.745	Poecilia_latipinna
ENSXMAG00000027119	si:dkey-17e16.10	99	95.035	ENSPMEG00000005155	si:dkey-17e16.10	94	95.035	Poecilia_mexicana
ENSXMAG00000027119	si:dkey-17e16.10	100	95.070	ENSPREG00000014123	si:dkey-17e16.10	96	95.070	Poecilia_reticulata
ENSXMAG00000027119	si:dkey-17e16.10	77	80.000	ENSPPYG00000009950	MRPS12	80	80.000	Pongo_abelii
ENSXMAG00000027119	si:dkey-17e16.10	80	79.646	ENSPCAG00000010853	MRPS12	82	79.646	Procavia_capensis
ENSXMAG00000027119	si:dkey-17e16.10	80	80.531	ENSPCOG00000020370	MRPS12	81	80.531	Propithecus_coquereli
ENSXMAG00000027119	si:dkey-17e16.10	80	76.991	ENSPVAG00000011605	MRPS12	81	76.991	Pteropus_vampyrus
ENSXMAG00000027119	si:dkey-17e16.10	99	91.489	ENSPNYG00000015506	si:dkey-17e16.10	93	91.489	Pundamilia_nyererei
ENSXMAG00000027119	si:dkey-17e16.10	80	89.381	ENSPNAG00000016315	si:dkey-17e16.10	76	89.381	Pygocentrus_nattereri
ENSXMAG00000027119	si:dkey-17e16.10	80	82.301	ENSRNOG00000019949	Mrps12	81	82.301	Rattus_norvegicus
ENSXMAG00000027119	si:dkey-17e16.10	78	80.180	ENSRBIG00000029741	MRPS12	80	80.180	Rhinopithecus_bieti
ENSXMAG00000027119	si:dkey-17e16.10	78	80.180	ENSRROG00000030787	MRPS12	80	80.180	Rhinopithecus_roxellana
ENSXMAG00000027119	si:dkey-17e16.10	78	81.081	ENSSBOG00000025707	MRPS12	80	81.081	Saimiri_boliviensis_boliviensis
ENSXMAG00000027119	si:dkey-17e16.10	99	75.177	ENSSFOG00015018102	mrps12	99	75.177	Scleropages_formosus
ENSXMAG00000027119	si:dkey-17e16.10	99	90.780	ENSSMAG00000004249	si:dkey-17e16.10	99	90.780	Scophthalmus_maximus
ENSXMAG00000027119	si:dkey-17e16.10	99	87.943	ENSSDUG00000020424	si:dkey-17e16.10	97	87.943	Seriola_dumerili
ENSXMAG00000027119	si:dkey-17e16.10	99	87.943	ENSSLDG00000016320	si:dkey-17e16.10	97	87.943	Seriola_lalandi_dorsalis
ENSXMAG00000027119	si:dkey-17e16.10	82	78.448	ENSSARG00000006985	MRPS12	83	78.448	Sorex_araneus
ENSXMAG00000027119	si:dkey-17e16.10	80	82.456	ENSSPUG00000004675	MRPS12	75	82.456	Sphenodon_punctatus
ENSXMAG00000027119	si:dkey-17e16.10	99	85.816	ENSSPAG00000012951	si:dkey-17e16.10	99	85.816	Stegastes_partitus
ENSXMAG00000027119	si:dkey-17e16.10	82	80.172	ENSSSCG00000031860	MRPS12	91	80.172	Sus_scrofa
ENSXMAG00000027119	si:dkey-17e16.10	77	77.273	ENSTGUG00000016491	MRPS12	100	77.273	Taeniopygia_guttata
ENSXMAG00000027119	si:dkey-17e16.10	92	85.385	ENSTRUG00000017342	si:dkey-17e16.10	92	85.385	Takifugu_rubripes
ENSXMAG00000027119	si:dkey-17e16.10	91	85.271	ENSTNIG00000004898	si:dkey-17e16.10	94	85.271	Tetraodon_nigroviridis
ENSXMAG00000027119	si:dkey-17e16.10	80	81.416	ENSTBEG00000001288	MRPS12	81	81.416	Tupaia_belangeri
ENSXMAG00000027119	si:dkey-17e16.10	82	79.310	ENSTTRG00000011794	MRPS12	83	79.310	Tursiops_truncatus
ENSXMAG00000027119	si:dkey-17e16.10	80	78.761	ENSUAMG00000011626	MRPS12	81	78.761	Ursus_americanus
ENSXMAG00000027119	si:dkey-17e16.10	80	80.531	ENSUMAG00000019235	MRPS12	81	80.531	Ursus_maritimus
ENSXMAG00000027119	si:dkey-17e16.10	97	72.340	ENSVVUG00000006433	MRPS12	60	78.689	Vulpes_vulpes
ENSXMAG00000027119	si:dkey-17e16.10	91	74.436	ENSXETG00000005326	mrps12	89	74.436	Xenopus_tropicalis
ENSXMAG00000027119	si:dkey-17e16.10	100	100.000	ENSXCOG00000020766	si:dkey-17e16.10	96	100.000	Xiphophorus_couchianus