EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000027130 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 3081 bases
Position: chr8:579125-582205
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000038671	RVT_1	PF00078.27	6.6e-49	1	1
ENSXMAP00000038671	RNase_H	PF00075.24	1.4e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000029733	-	3081	-	ENSXMAP00000038671	1026 (aa)	-	-

Gene Model

Click here to download ENSXMAG00000027130's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000027130's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000027130	-	99	40.762	ENSAMXG00000043500	-	82	40.762	Astyanax_mexicanus
ENSXMAG00000027130	-	99	45.224	ENSDARG00000103436	BX548028.1	81	45.224	Danio_rerio
ENSXMAG00000027130	-	99	43.860	ENSDARG00000099201	BX908731.1	82	43.860	Danio_rerio
ENSXMAG00000027130	-	99	44.055	ENSDARG00000103037	CR848788.1	82	44.055	Danio_rerio
ENSXMAG00000027130	-	99	50.637	ENSKMAG00000003982	-	82	50.637	Kryptolebias_marmoratus
ENSXMAG00000027130	-	82	66.231	ENSKMAG00000012711	-	100	66.231	Kryptolebias_marmoratus
ENSXMAG00000027130	-	99	50.637	ENSKMAG00000004415	-	82	50.637	Kryptolebias_marmoratus
ENSXMAG00000027130	-	78	52.912	ENSKMAG00000021014	-	99	52.912	Kryptolebias_marmoratus
ENSXMAG00000027130	-	99	43.961	ENSORLG00000027174	-	82	43.768	Oryzias_latipes
ENSXMAG00000027130	-	99	44.155	ENSORLG00000024423	-	82	44.155	Oryzias_latipes
ENSXMAG00000027130	-	99	43.961	ENSORLG00000023592	-	82	43.768	Oryzias_latipes
ENSXMAG00000027130	-	99	43.961	ENSORLG00000026314	-	82	43.768	Oryzias_latipes
ENSXMAG00000027130	-	99	44.251	ENSORLG00020011427	-	82	44.058	Oryzias_latipes_hni
ENSXMAG00000027130	-	99	44.444	ENSORLG00020020238	-	82	44.251	Oryzias_latipes_hni
ENSXMAG00000027130	-	86	45.676	ENSORLG00020019901	-	99	45.676	Oryzias_latipes_hni
ENSXMAG00000027130	-	99	44.444	ENSORLG00020018543	-	82	44.251	Oryzias_latipes_hni
ENSXMAG00000027130	-	84	45.268	ENSORLG00015013792	-	79	45.040	Oryzias_latipes_hsok
ENSXMAG00000027130	-	80	45.278	ENSOMEG00000003836	-	76	44.915	Oryzias_melastigma
ENSXMAG00000027130	-	99	45.481	ENSPKIG00000019189	-	81	45.481	Paramormyrops_kingsleyae
ENSXMAG00000027130	-	50	68.431	ENSPREG00000014046	-	100	68.431	Poecilia_reticulata
ENSXMAG00000027130	-	84	66.821	ENSXMAG00000020874	-	95	66.821	Xiphophorus_maculatus
ENSXMAG00000027130	-	100	98.053	ENSXMAG00000023078	-	100	98.053	Xiphophorus_maculatus
ENSXMAG00000027130	-	99	50.196	ENSXMAG00000021061	-	82	50.392	Xiphophorus_maculatus
ENSXMAG00000027130	-	99	45.463	ENSXMAG00000029466	-	89	45.463	Xiphophorus_maculatus
ENSXMAG00000027130	-	99	50.442	ENSXMAG00000028309	-	81	50.442	Xiphophorus_maculatus
ENSXMAG00000027130	-	78	51.311	ENSXMAG00000023126	-	99	51.561	Xiphophorus_maculatus
ENSXMAG00000027130	-	86	46.292	ENSXMAG00000024143	-	100	46.292	Xiphophorus_maculatus
ENSXMAG00000027130	-	99	50.737	ENSXMAG00000021070	-	81	50.737	Xiphophorus_maculatus
ENSXMAG00000027130	-	76	52.229	ENSXMAG00000023377	-	100	52.229	Xiphophorus_maculatus
ENSXMAG00000027130	-	73	41.931	ENSXMAG00000025430	-	99	41.931	Xiphophorus_maculatus
ENSXMAG00000027130	-	99	46.869	ENSXMAG00000026588	-	91	46.869	Xiphophorus_maculatus
ENSXMAG00000027130	-	99	50.737	ENSXMAG00000021755	-	81	50.737	Xiphophorus_maculatus
ENSXMAG00000027130	-	99	46.869	ENSXMAG00000022223	-	91	46.869	Xiphophorus_maculatus
ENSXMAG00000027130	-	100	98.150	ENSXMAG00000029923	-	100	98.150	Xiphophorus_maculatus
ENSXMAG00000027130	-	99	46.869	ENSXMAG00000026248	-	91	46.869	Xiphophorus_maculatus