EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000027171 (Gene tree)
Gene ID: 102233778
Gene Symbol: -
Alias: -
Full Name: probable ribonuclease ZC3H12C
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Minus strand
Length: 13540 bases
Position: chr24:6285157-6298696
Accession: 102233778
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000038082	RNase_Zc3h12a	PF11977.8	2.4e-66	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000023729	-	6192	XM_005807985	ENSXMAP00000038082	931 (aa)	XP_005808042	UPI0003B3EA2D

Gene Model

Click here to download ENSXMAG00000027171's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000027171's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000027171	-	70	63.462	ENSAPOG00000001632	-	87	63.462	Acanthochromis_polyacanthus
ENSXMAG00000027171	-	79	79.233	ENSAPOG00000015355	-	82	79.233	Acanthochromis_polyacanthus
ENSXMAG00000027171	-	100	67.616	ENSACIG00000001362	-	97	69.085	Amphilophus_citrinellus
ENSXMAG00000027171	-	99	77.963	ENSAOCG00000003866	-	99	79.643	Amphiprion_ocellaris
ENSXMAG00000027171	-	100	72.088	ENSAPEG00000005727	-	99	84.211	Amphiprion_percula
ENSXMAG00000027171	-	73	75.687	ENSAPEG00000018582	-	99	84.211	Amphiprion_percula
ENSXMAG00000027171	-	100	75.542	ENSATEG00000004134	-	100	76.161	Anabas_testudineus
ENSXMAG00000027171	-	54	73.425	ENSATEG00000002260	-	84	78.481	Anabas_testudineus
ENSXMAG00000027171	-	64	52.751	ENSACLG00000018493	-	99	43.505	Astatotilapia_calliptera
ENSXMAG00000027171	-	100	75.103	ENSACLG00000027924	-	100	75.231	Astatotilapia_calliptera
ENSXMAG00000027171	-	87	72.074	ENSCSEG00000010073	-	99	73.086	Cynoglossus_semilaevis
ENSXMAG00000027171	-	65	52.598	ENSCSEG00000008542	-	68	52.696	Cynoglossus_semilaevis
ENSXMAG00000027171	-	100	83.792	ENSCVAG00000002328	-	100	83.369	Cyprinodon_variegatus
ENSXMAG00000027171	-	65	54.545	ENSELUG00000005470	-	100	46.279	Esox_lucius
ENSXMAG00000027171	-	85	55.871	ENSELUG00000009319	-	96	55.638	Esox_lucius
ENSXMAG00000027171	-	92	91.837	ENSFHEG00000021225	-	100	91.837	Fundulus_heteroclitus
ENSXMAG00000027171	-	73	45.324	ENSGMOG00000017975	-	100	45.845	Gadus_morhua
ENSXMAG00000027171	-	100	94.319	ENSGAFG00000005290	-	100	93.891	Gambusia_affinis
ENSXMAG00000027171	-	73	46.088	ENSGACG00000001339	-	99	45.000	Gasterosteus_aculeatus
ENSXMAG00000027171	-	73	69.242	ENSGACG00000014201	-	100	69.679	Gasterosteus_aculeatus
ENSXMAG00000027171	-	100	74.897	ENSHBUG00000006831	-	100	75.128	Haplochromis_burtoni
ENSXMAG00000027171	-	100	61.880	ENSHCOG00000008878	-	99	81.250	Hippocampus_comes
ENSXMAG00000027171	-	100	77.648	ENSKMAG00000011694	-	100	77.754	Kryptolebias_marmoratus
ENSXMAG00000027171	-	99	43.373	ENSLBEG00000012710	-	68	53.666	Labrus_bergylta
ENSXMAG00000027171	-	100	74.433	ENSLBEG00000003547	-	100	74.742	Labrus_bergylta
ENSXMAG00000027171	-	97	73.866	ENSLBEG00000012554	-	99	78.527	Labrus_bergylta
ENSXMAG00000027171	-	54	55.324	ENSLACG00000017365	ZC3H12A	57	62.222	Latimeria_chalumnae
ENSXMAG00000027171	-	65	52.987	ENSMAMG00000020372	-	99	44.330	Mastacembelus_armatus
ENSXMAG00000027171	-	93	75.399	ENSMAMG00000021794	-	94	86.928	Mastacembelus_armatus
ENSXMAG00000027171	-	80	52.751	ENSMZEG00005019137	-	90	64.103	Maylandia_zebra
ENSXMAG00000027171	-	100	75.103	ENSMZEG00005007718	-	100	75.231	Maylandia_zebra
ENSXMAG00000027171	-	94	72.991	ENSMMOG00000005728	-	99	77.819	Mola_mola
ENSXMAG00000027171	-	99	44.913	ENSMMOG00000019526	-	93	43.333	Mola_mola
ENSXMAG00000027171	-	100	73.679	ENSMALG00000010501	-	100	74.303	Monopterus_albus
ENSXMAG00000027171	-	64	51.053	ENSNBRG00000012175	-	90	68.182	Neolamprologus_brichardi
ENSXMAG00000027171	-	100	75.000	ENSNBRG00000006978	-	100	75.334	Neolamprologus_brichardi
ENSXMAG00000027171	-	100	75.437	ENSONIG00000012268	-	100	75.873	Oreochromis_niloticus
ENSXMAG00000027171	-	86	75.528	ENSORLG00000029243	-	97	76.025	Oryzias_latipes
ENSXMAG00000027171	-	100	72.495	ENSORLG00020017005	-	100	72.708	Oryzias_latipes_hni
ENSXMAG00000027171	-	100	72.021	ENSORLG00015015211	-	100	72.979	Oryzias_latipes_hsok
ENSXMAG00000027171	-	100	71.937	ENSOMEG00000006666	-	100	74.180	Oryzias_melastigma
ENSXMAG00000027171	-	57	79.048	ENSPMGG00000009790	-	90	79.553	Periophthalmus_magnuspinnatus
ENSXMAG00000027171	-	52	57.287	ENSPMGG00000020126	-	51	58.038	Periophthalmus_magnuspinnatus
ENSXMAG00000027171	-	100	95.494	ENSPLAG00000009867	-	100	95.494	Poecilia_latipinna
ENSXMAG00000027171	-	99	43.813	ENSPMEG00000011676	-	50	61.233	Poecilia_mexicana
ENSXMAG00000027171	-	100	95.494	ENSPMEG00000006624	-	100	95.494	Poecilia_mexicana
ENSXMAG00000027171	-	100	95.489	ENSPREG00000010838	-	100	95.489	Poecilia_reticulata
ENSXMAG00000027171	-	98	44.075	ENSPREG00000001607	-	74	78.166	Poecilia_reticulata
ENSXMAG00000027171	-	100	75.078	ENSSMAG00000007545	-	100	75.493	Scophthalmus_maximus
ENSXMAG00000027171	-	87	48.506	ENSSMAG00000007258	-	99	44.314	Scophthalmus_maximus
ENSXMAG00000027171	-	100	76.386	ENSSDUG00000021864	-	100	76.797	Seriola_dumerili
ENSXMAG00000027171	-	99	45.298	ENSSDUG00000013237	-	91	65.789	Seriola_dumerili
ENSXMAG00000027171	-	100	76.489	ENSSLDG00000012268	-	100	76.694	Seriola_lalandi_dorsalis
ENSXMAG00000027171	-	99	46.038	ENSSLDG00000004886	-	99	44.794	Seriola_lalandi_dorsalis
ENSXMAG00000027171	-	100	76.876	ENSSPAG00000009485	-	100	77.184	Stegastes_partitus
ENSXMAG00000027171	-	99	45.262	ENSSPAG00000001850	-	99	43.812	Stegastes_partitus
ENSXMAG00000027171	-	99	71.954	ENSTRUG00000022519	-	99	71.996	Takifugu_rubripes
ENSXMAG00000027171	-	74	67.908	ENSTNIG00000014519	-	100	82.624	Tetraodon_nigroviridis
ENSXMAG00000027171	-	84	48.098	ENSXMAG00000014715	-	88	76.639	Xiphophorus_maculatus