EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000027300 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Minus strand
Length: 4528 bases
Position: chr10:16631112-16635639
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000032272	zf-C2H2	PF00096.26	4.2e-35	1	6
ENSXMAP00000032272	zf-C2H2	PF00096.26	4.2e-35	2	6
ENSXMAP00000032272	zf-C2H2	PF00096.26	4.2e-35	3	6
ENSXMAP00000032272	zf-C2H2	PF00096.26	4.2e-35	4	6
ENSXMAP00000032272	zf-C2H2	PF00096.26	4.2e-35	5	6
ENSXMAP00000032272	zf-C2H2	PF00096.26	4.2e-35	6	6
ENSXMAP00000032272	zf-met	PF12874.7	1.7e-17	1	4
ENSXMAP00000032272	zf-met	PF12874.7	1.7e-17	2	4
ENSXMAP00000032272	zf-met	PF12874.7	1.7e-17	3	4
ENSXMAP00000032272	zf-met	PF12874.7	1.7e-17	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000031741	-	990	-	ENSXMAP00000032272	329 (aa)	-	-

Gene Model

Click here to download ENSXMAG00000027300's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000027300's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000027300	-	57	52.841	ENSG00000159915	ZNF233	65	51.955	Homo_sapiens
ENSXMAG00000027300	-	57	52.273	ENSAMEG00000006122	ZNF233	65	50.820	Ailuropoda_melanoleuca
ENSXMAG00000027300	-	57	52.229	ENSCATG00000015076	ZNF233	63	52.229	Cercocebus_atys
ENSXMAG00000027300	-	57	51.913	ENSCSAG00000003326	ZNF233	67	51.913	Chlorocebus_sabaeus
ENSXMAG00000027300	-	67	51.977	ENSCHOG00000010443	ZNF233	65	51.977	Choloepus_hoffmanni
ENSXMAG00000027300	-	57	54.237	ENSCANG00000032081	ZNF233	68	54.237	Colobus_angolensis_palliatus
ENSXMAG00000027300	-	57	51.913	ENSCGRG00000015629	-	57	51.913	Cricetulus_griseus_crigri
ENSXMAG00000027300	-	59	51.220	ENSCGRG00000015809	-	52	51.220	Cricetulus_griseus_crigri
ENSXMAG00000027300	-	76	52.459	ENSDNOG00000038729	ZNF233	68	52.459	Dasypus_novemcinctus
ENSXMAG00000027300	-	57	51.351	ENSFALG00000009044	-	99	51.351	Ficedula_albicollis
ENSXMAG00000027300	-	57	52.459	ENSGGOG00000013940	ZNF233	72	52.459	Gorilla_gorilla
ENSXMAG00000027300	-	59	53.107	ENSMFAG00000039215	ZNF233	67	53.107	Macaca_fascicularis
ENSXMAG00000027300	-	58	53.107	ENSMMUG00000012797	ZNF233	67	53.107	Macaca_mulatta
ENSXMAG00000027300	-	90	48.168	ENSMZEG00005024630	-	94	48.168	Maylandia_zebra
ENSXMAG00000027300	-	57	52.459	ENSMICG00000016725	ZNF233	68	52.459	Microcebus_murinus
ENSXMAG00000027300	-	73	50.273	MGP_CAROLIEiJ_G0029326	Zfp108	61	50.273	Mus_caroli
ENSXMAG00000027300	-	64	51.099	MGP_CAROLIEiJ_G0029327	Zfp93	62	51.099	Mus_caroli
ENSXMAG00000027300	-	71	52.198	MGP_CAROLIEiJ_G0029322	Zfp235	61	52.198	Mus_caroli
ENSXMAG00000027300	-	58	51.648	ENSMUSG00000055305	Zfp93	67	51.648	Mus_musculus
ENSXMAG00000027300	-	61	51.613	ENSMUSG00000068962	Zfp114	67	51.613	Mus_musculus
ENSXMAG00000027300	-	64	52.198	ENSMUSG00000047603	Zfp235	61	52.198	Mus_musculus
ENSXMAG00000027300	-	73	48.780	ENSMUSG00000030486	Zfp108	67	50.820	Mus_musculus
ENSXMAG00000027300	-	73	50.273	MGP_PahariEiJ_G0021177	Zfp108	56	50.273	Mus_pahari
ENSXMAG00000027300	-	64	52.198	MGP_PahariEiJ_G0021173	Zfp235	68	52.198	Mus_pahari
ENSXMAG00000027300	-	75	51.124	MGP_PahariEiJ_G0021178	Zfp93	92	51.124	Mus_pahari
ENSXMAG00000027300	-	73	47.879	MGP_SPRETEiJ_G0030420	Zfp108	56	50.273	Mus_spretus
ENSXMAG00000027300	-	64	50.273	MGP_SPRETEiJ_G0030421	-	85	50.273	Mus_spretus
ENSXMAG00000027300	-	57	51.220	MGP_SPRETEiJ_G0030417	Zfp114	68	51.220	Mus_spretus
ENSXMAG00000027300	-	71	52.198	MGP_SPRETEiJ_G0030416	Zfp235	61	52.198	Mus_spretus
ENSXMAG00000027300	-	73	48.148	ENSORLG00015017539	-	91	48.148	Oryzias_latipes_hsok
ENSXMAG00000027300	-	58	51.852	ENSOGAG00000001912	ZNF233	64	51.852	Otolemur_garnettii
ENSXMAG00000027300	-	57	54.237	ENSPPAG00000030145	ZNF233	66	54.237	Pan_paniscus
ENSXMAG00000027300	-	57	54.237	ENSPTRG00000011111	ZNF233	66	54.237	Pan_troglodytes
ENSXMAG00000027300	-	57	53.977	ENSPANG00000010670	ZNF233	66	51.613	Papio_anubis
ENSXMAG00000027300	-	71	52.747	ENSPEMG00000018022	-	68	52.747	Peromyscus_maniculatus_bairdii
ENSXMAG00000027300	-	57	53.005	ENSPPYG00000010085	ZNF233	64	53.005	Pongo_abelii
ENSXMAG00000027300	-	63	53.488	ENSPCOG00000015292	ZNF233	65	52.514	Propithecus_coquereli
ENSXMAG00000027300	-	74	41.304	ENSPVAG00000004388	ZNF233	60	41.304	Pteropus_vampyrus
ENSXMAG00000027300	-	57	52.459	ENSRBIG00000035218	ZNF233	66	52.459	Rhinopithecus_bieti
ENSXMAG00000027300	-	57	53.977	ENSRROG00000030619	ZNF233	66	51.613	Rhinopithecus_roxellana
ENSXMAG00000027300	-	57	55.814	ENSTTRG00000011818	ZNF233	64	54.749	Tursiops_truncatus
ENSXMAG00000027300	-	57	51.366	ENSUMAG00000023065	ZNF233	72	51.366	Ursus_maritimus
ENSXMAG00000027300	-	60	53.293	ENSVPAG00000007465	ZNF233	65	53.293	Vicugna_pacos