EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000027362 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: gastrula zinc finger protein XlCGF8.2DB-like
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 381 bases
Position: chr22:998949-999329
Accession: 111606771
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000028514	zf-C2H2	PF00096.26	2.7e-14	1	3
ENSXMAP00000028514	zf-C2H2	PF00096.26	2.7e-14	2	3
ENSXMAP00000028514	zf-C2H2	PF00096.26	2.7e-14	3	3
ENSXMAP00000028514	zf-met	PF12874.7	0.00013	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000037436	-	297	XM_023328011	ENSXMAP00000028514	98 (aa)	XP_023183779	-

Gene Model

Click here to download ENSXMAG00000027362's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000027362's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000027362	-	100	57.647	ENSAPOG00000021980	-	94	57.647	Acanthochromis_polyacanthus
ENSXMAG00000027362	-	99	55.682	ENSAPOG00000005259	-	78	53.191	Acanthochromis_polyacanthus
ENSXMAG00000027362	-	99	51.064	ENSACIG00000009717	-	76	51.807	Amphilophus_citrinellus
ENSXMAG00000027362	-	96	48.529	ENSACLG00000021022	-	68	48.529	Astatotilapia_calliptera
ENSXMAG00000027362	-	98	46.774	ENSACLG00000017621	-	54	46.774	Astatotilapia_calliptera
ENSXMAG00000027362	-	100	49.474	ENSCVAG00000002506	-	95	49.474	Cyprinodon_variegatus
ENSXMAG00000027362	-	96	63.830	ENSFHEG00000003405	-	71	63.830	Fundulus_heteroclitus
ENSXMAG00000027362	-	97	63.889	ENSFHEG00000006765	-	59	63.889	Fundulus_heteroclitus
ENSXMAG00000027362	-	96	71.277	ENSFHEG00000017989	-	70	71.277	Fundulus_heteroclitus
ENSXMAG00000027362	-	96	69.333	ENSFHEG00000019704	-	100	69.333	Fundulus_heteroclitus
ENSXMAG00000027362	-	97	73.333	ENSFHEG00000017885	-	70	73.333	Fundulus_heteroclitus
ENSXMAG00000027362	-	99	76.923	ENSFHEG00000021003	-	82	76.923	Fundulus_heteroclitus
ENSXMAG00000027362	-	98	62.366	ENSFHEG00000013302	-	78	62.366	Fundulus_heteroclitus
ENSXMAG00000027362	-	98	62.500	ENSFHEG00000016540	-	84	62.500	Fundulus_heteroclitus
ENSXMAG00000027362	-	100	60.638	ENSFHEG00000015571	-	73	60.638	Fundulus_heteroclitus
ENSXMAG00000027362	-	100	67.416	ENSFHEG00000005993	-	76	67.416	Fundulus_heteroclitus
ENSXMAG00000027362	-	97	70.213	ENSFHEG00000013486	-	83	70.213	Fundulus_heteroclitus
ENSXMAG00000027362	-	100	55.102	ENSFHEG00000013792	-	90	52.041	Fundulus_heteroclitus
ENSXMAG00000027362	-	98	70.787	ENSFHEG00000005983	-	65	70.787	Fundulus_heteroclitus
ENSXMAG00000027362	-	97	71.277	ENSGAFG00000012733	-	52	71.277	Gambusia_affinis
ENSXMAG00000027362	-	99	57.971	ENSGAFG00000014188	-	75	57.971	Gambusia_affinis
ENSXMAG00000027362	-	96	63.736	ENSGAFG00000011278	-	54	63.736	Gambusia_affinis
ENSXMAG00000027362	-	96	63.158	ENSKMAG00000009682	-	58	64.211	Kryptolebias_marmoratus
ENSXMAG00000027362	-	96	61.798	ENSKMAG00000020025	-	83	61.798	Kryptolebias_marmoratus
ENSXMAG00000027362	-	96	61.538	ENSKMAG00000020339	-	57	61.538	Kryptolebias_marmoratus
ENSXMAG00000027362	-	96	62.500	ENSKMAG00000021874	-	75	63.043	Kryptolebias_marmoratus
ENSXMAG00000027362	-	96	66.154	ENSKMAG00000003203	-	80	66.154	Kryptolebias_marmoratus
ENSXMAG00000027362	-	98	61.702	ENSKMAG00000008316	-	84	61.702	Kryptolebias_marmoratus
ENSXMAG00000027362	-	88	41.176	ENSKMAG00000001190	-	96	41.176	Kryptolebias_marmoratus
ENSXMAG00000027362	-	95	50.000	ENSMALG00000009834	-	70	50.000	Monopterus_albus
ENSXMAG00000027362	-	94	43.478	ENSNBRG00000024294	-	60	43.478	Neolamprologus_brichardi
ENSXMAG00000027362	-	100	58.511	ENSONIG00000018058	-	100	58.511	Oreochromis_niloticus
ENSXMAG00000027362	-	96	52.747	ENSORLG00015007920	-	93	51.471	Oryzias_latipes_hsok
ENSXMAG00000027362	-	95	43.011	ENSPMGG00000010053	-	54	43.011	Periophthalmus_magnuspinnatus
ENSXMAG00000027362	-	96	76.471	ENSPFOG00000005288	-	52	69.149	Poecilia_formosa
ENSXMAG00000027362	-	96	68.085	ENSPFOG00000007333	-	77	68.085	Poecilia_formosa
ENSXMAG00000027362	-	99	62.366	ENSPFOG00000006147	-	99	62.366	Poecilia_formosa
ENSXMAG00000027362	-	98	60.440	ENSPFOG00000001053	-	100	62.353	Poecilia_formosa
ENSXMAG00000027362	-	96	47.872	ENSPMEG00000022716	-	51	47.872	Poecilia_mexicana
ENSXMAG00000027362	-	97	69.149	ENSPMEG00000001873	-	53	69.149	Poecilia_mexicana
ENSXMAG00000027362	-	99	54.255	ENSPREG00000013780	-	71	50.549	Poecilia_reticulata
ENSXMAG00000027362	-	97	69.149	ENSPREG00000000467	-	53	69.149	Poecilia_reticulata
ENSXMAG00000027362	-	99	45.000	ENSPNAG00000027916	-	86	45.000	Pygocentrus_nattereri
ENSXMAG00000027362	-	97	68.085	ENSXCOG00000012458	-	60	68.085	Xiphophorus_couchianus
ENSXMAG00000027362	-	97	68.085	ENSXMAG00000029703	-	53	68.085	Xiphophorus_maculatus
ENSXMAG00000027362	-	96	65.517	ENSXMAG00000028978	-	69	65.517	Xiphophorus_maculatus