EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000027558 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Minus strand
Length: 3717 bases
Position: chr17:20436833-20440549
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000037293	RVT_1	PF00078.27	3.3e-40	1	1
ENSXMAP00000037293	Exo_endo_phos	PF03372.23	2.8e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000033954	-	3717	-	ENSXMAP00000037293	1238 (aa)	-	-

Gene Model

Click here to download ENSXMAG00000027558's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000027558's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000027558	-	89	37.044	ENSAOCG00000008973	-	77	36.898	Amphiprion_ocellaris
ENSXMAG00000027558	-	95	35.264	ENSAPEG00000012642	-	94	35.131	Amphiprion_percula
ENSXMAG00000027558	-	93	32.007	ENSACLG00000012298	-	93	31.967	Astatotilapia_calliptera
ENSXMAG00000027558	-	95	35.649	ENSACLG00000014673	-	93	36.003	Astatotilapia_calliptera
ENSXMAG00000027558	-	82	33.172	ENSACLG00000026023	-	94	33.071	Astatotilapia_calliptera
ENSXMAG00000027558	-	91	49.154	ENSACLG00000018177	-	99	49.154	Astatotilapia_calliptera
ENSXMAG00000027558	-	90	47.212	ENSACLG00000002748	-	93	47.212	Astatotilapia_calliptera
ENSXMAG00000027558	-	95	31.239	ENSACLG00000023850	-	93	31.239	Astatotilapia_calliptera
ENSXMAG00000027558	-	95	37.257	ENSAMXG00000042761	-	93	37.257	Astyanax_mexicanus
ENSXMAG00000027558	-	95	32.101	ENSAMXG00000034221	-	93	32.101	Astyanax_mexicanus
ENSXMAG00000027558	-	95	31.266	ENSAMXG00000031230	-	93	31.181	Astyanax_mexicanus
ENSXMAG00000027558	-	63	30.895	ENSAMXG00000033587	-	95	30.292	Astyanax_mexicanus
ENSXMAG00000027558	-	59	37.908	ENSAMXG00000036752	-	90	37.908	Astyanax_mexicanus
ENSXMAG00000027558	-	77	32.990	ENSAMXG00000037218	-	96	32.990	Astyanax_mexicanus
ENSXMAG00000027558	-	95	37.806	ENSKMAG00000007098	-	93	37.806	Kryptolebias_marmoratus
ENSXMAG00000027558	-	96	36.013	ENSKMAG00000013004	-	94	36.013	Kryptolebias_marmoratus
ENSXMAG00000027558	-	94	32.291	ENSKMAG00000014428	-	93	32.291	Kryptolebias_marmoratus
ENSXMAG00000027558	-	96	36.097	ENSKMAG00000002601	-	96	36.097	Kryptolebias_marmoratus
ENSXMAG00000027558	-	74	35.339	ENSKMAG00000006893	-	92	35.339	Kryptolebias_marmoratus
ENSXMAG00000027558	-	95	30.051	ENSKMAG00000018279	-	93	30.051	Kryptolebias_marmoratus
ENSXMAG00000027558	-	88	32.664	ENSKMAG00000006598	-	94	32.633	Kryptolebias_marmoratus
ENSXMAG00000027558	-	95	31.703	ENSKMAG00000020345	-	94	31.703	Kryptolebias_marmoratus
ENSXMAG00000027558	-	56	38.440	ENSLBEG00000017877	-	88	37.517	Labrus_bergylta
ENSXMAG00000027558	-	54	37.026	ENSMZEG00005013632	-	89	37.758	Maylandia_zebra
ENSXMAG00000027558	-	53	32.733	ENSONIG00000020880	-	99	32.733	Oreochromis_niloticus
ENSXMAG00000027558	-	67	33.772	ENSONIG00000020778	-	91	33.772	Oreochromis_niloticus
ENSXMAG00000027558	-	95	32.269	ENSORLG00000029419	-	93	32.185	Oryzias_latipes
ENSXMAG00000027558	-	95	35.418	ENSORLG00000025420	-	94	35.418	Oryzias_latipes
ENSXMAG00000027558	-	95	35.418	ENSORLG00000026691	-	94	35.418	Oryzias_latipes
ENSXMAG00000027558	-	57	36.643	ENSORLG00000023193	-	84	36.517	Oryzias_latipes
ENSXMAG00000027558	-	94	31.186	ENSORLG00000024310	-	93	31.250	Oryzias_latipes
ENSXMAG00000027558	-	95	35.249	ENSORLG00000029798	-	94	35.249	Oryzias_latipes
ENSXMAG00000027558	-	95	35.334	ENSORLG00020020951	-	94	35.334	Oryzias_latipes_hni
ENSXMAG00000027558	-	95	31.414	ENSORLG00020000561	-	93	31.414	Oryzias_latipes_hni
ENSXMAG00000027558	-	55	31.205	ENSORLG00020003581	-	84	31.205	Oryzias_latipes_hni
ENSXMAG00000027558	-	95	35.823	ENSORLG00020001169	-	92	35.823	Oryzias_latipes_hni
ENSXMAG00000027558	-	65	31.443	ENSORLG00020016539	-	90	31.443	Oryzias_latipes_hni
ENSXMAG00000027558	-	95	36.887	ENSORLG00020008142	-	93	36.887	Oryzias_latipes_hni
ENSXMAG00000027558	-	95	31.414	ENSORLG00015013713	-	93	31.414	Oryzias_latipes_hsok
ENSXMAG00000027558	-	95	36.975	ENSORLG00015002129	-	92	36.485	Oryzias_latipes_hsok
ENSXMAG00000027558	-	95	32.660	ENSORLG00015002592	-	91	32.660	Oryzias_latipes_hsok
ENSXMAG00000027558	-	75	36.617	ENSOMEG00000021560	-	90	36.617	Oryzias_melastigma
ENSXMAG00000027558	-	58	32.187	ENSOMEG00000006131	-	91	31.862	Oryzias_melastigma
ENSXMAG00000027558	-	76	46.723	ENSPFOG00000021895	-	97	46.723	Poecilia_formosa
ENSXMAG00000027558	-	95	30.892	ENSPREG00000005522	-	95	30.892	Poecilia_reticulata
ENSXMAG00000027558	-	94	33.305	ENSPREG00000018911	-	92	33.193	Poecilia_reticulata
ENSXMAG00000027558	-	72	37.751	ENSSLDG00000010601	-	87	36.916	Seriola_lalandi_dorsalis
ENSXMAG00000027558	-	68	34.975	ENSXETG00000034016	-	87	34.975	Xenopus_tropicalis
ENSXMAG00000027558	-	62	31.592	ENSXMAG00000024492	-	90	31.592	Xiphophorus_maculatus
ENSXMAG00000027558	-	95	38.819	ENSXMAG00000027070	-	93	38.739	Xiphophorus_maculatus
ENSXMAG00000027558	-	60	31.926	ENSXMAG00000021762	-	86	31.926	Xiphophorus_maculatus
ENSXMAG00000027558	-	60	37.200	ENSXMAG00000023805	-	90	37.200	Xiphophorus_maculatus
ENSXMAG00000027558	-	89	31.790	ENSXMAG00000028274	-	93	31.551	Xiphophorus_maculatus