EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000027598 (Gene tree)
Gene ID: 102231518
Gene Symbol: SRL (1 of many)
Alias: SAR
Full Name: sarcalumenin-like
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 12951 bases
Position: chr5:23034374-23047324
Accession: 102231518
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000033754	MMR_HSR1	PF01926.23	5.3e-08	1	1
ENSXMAP00000039431	MMR_HSR1	PF01926.23	5.6e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000024336	SRL (1 of many)-202	4793	-	ENSXMAP00000033754	734 (aa)	-	-
ENSXMAT00000021014	SRL (1 of many)-201	4500	XM_014471010	ENSXMAP00000039431	763 (aa)	XP_014326496	-

Gene Model

Click here to download ENSXMAG00000027598's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000027598's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000027598	SRL	64	71.915	ENSG00000185739	SRL	99	74.260	Homo_sapiens
ENSXMAG00000027598	SRL	64	74.145	ENSAPOG00000018093	srl	99	74.890	Acanthochromis_polyacanthus
ENSXMAG00000027598	SRL	66	88.041	ENSAPOG00000012432	SRL	99	86.768	Acanthochromis_polyacanthus
ENSXMAG00000027598	SRL	62	74.286	ENSAMEG00000010862	SRL	50	73.626	Ailuropoda_melanoleuca
ENSXMAG00000027598	SRL	63	86.551	ENSACIG00000015419	SRL	99	86.551	Amphilophus_citrinellus
ENSXMAG00000027598	SRL	63	75.378	ENSACIG00000015799	srl	99	75.378	Amphilophus_citrinellus
ENSXMAG00000027598	SRL	64	87.607	ENSAOCG00000017049	SRL	99	86.966	Amphiprion_ocellaris
ENSXMAG00000027598	SRL	61	75.168	ENSAOCG00000007574	srl	100	75.168	Amphiprion_ocellaris
ENSXMAG00000027598	SRL	64	82.479	ENSAPEG00000006533	SRL	99	83.120	Amphiprion_percula
ENSXMAG00000027598	SRL	64	74.359	ENSAPEG00000006911	srl	97	74.359	Amphiprion_percula
ENSXMAG00000027598	SRL	64	74.786	ENSATEG00000024315	srl	97	74.786	Anabas_testudineus
ENSXMAG00000027598	SRL	78	77.163	ENSATEG00000009643	SRL	97	62.911	Anabas_testudineus
ENSXMAG00000027598	SRL	62	72.747	ENSACAG00000016380	SRL	85	71.789	Anolis_carolinensis
ENSXMAG00000027598	SRL	64	75.214	ENSACLG00000027685	srl	99	75.431	Astatotilapia_calliptera
ENSXMAG00000027598	SRL	100	66.369	ENSACLG00000024674	SRL	96	65.693	Astatotilapia_calliptera
ENSXMAG00000027598	SRL	61	80.392	ENSAMXG00000038693	SRL	100	76.923	Astyanax_mexicanus
ENSXMAG00000027598	SRL	63	75.108	ENSAMXG00000018789	srl	88	74.675	Astyanax_mexicanus
ENSXMAG00000027598	SRL	64	72.516	ENSBTAG00000001078	SRL	59	70.492	Bos_taurus
ENSXMAG00000027598	SRL	62	73.626	ENSCJAG00000019750	SRL	97	72.553	Callithrix_jacchus
ENSXMAG00000027598	SRL	62	74.286	ENSCAFG00000019233	SRL	82	73.626	Canis_familiaris
ENSXMAG00000027598	SRL	66	69.094	ENSCAFG00020025024	SRL	63	67.235	Canis_lupus_dingo
ENSXMAG00000027598	SRL	65	71.849	ENSCHIG00000017927	SRL	59	70.287	Capra_hircus
ENSXMAG00000027598	SRL	64	71.915	ENSTSYG00000007919	SRL	99	74.487	Carlito_syrichta
ENSXMAG00000027598	SRL	62	73.626	ENSCPOG00000012643	SRL	94	74.066	Cavia_porcellus
ENSXMAG00000027598	SRL	62	69.451	ENSCCAG00000032646	SRL	100	75.000	Cebus_capucinus
ENSXMAG00000027598	SRL	62	74.505	ENSCATG00000032227	-	97	72.340	Cercocebus_atys
ENSXMAG00000027598	SRL	62	73.626	ENSCLAG00000016242	SRL	94	74.066	Chinchilla_lanigera
ENSXMAG00000027598	SRL	54	76.884	ENSCHOG00000001618	SRL	52	76.131	Choloepus_hoffmanni
ENSXMAG00000027598	SRL	63	75.810	ENSCPBG00000026371	SRL	96	71.069	Chrysemys_picta_bellii
ENSXMAG00000027598	SRL	60	54.110	ENSCING00000005231	-	94	55.687	Ciona_intestinalis
ENSXMAG00000027598	SRL	62	73.407	ENSCANG00000035872	SRL	99	74.260	Colobus_angolensis_palliatus
ENSXMAG00000027598	SRL	62	74.286	ENSCGRG00001016630	Srl	94	74.286	Cricetulus_griseus_chok1gshd
ENSXMAG00000027598	SRL	62	74.286	ENSCGRG00000005458	Srl	94	74.286	Cricetulus_griseus_crigri
ENSXMAG00000027598	SRL	63	82.468	ENSCSEG00000011866	SRL	90	83.117	Cynoglossus_semilaevis
ENSXMAG00000027598	SRL	64	74.573	ENSCSEG00000016151	srl	97	74.573	Cynoglossus_semilaevis
ENSXMAG00000027598	SRL	63	75.594	ENSCVAG00000003513	srl	96	76.484	Cyprinodon_variegatus
ENSXMAG00000027598	SRL	100	78.983	ENSCVAG00000022465	SRL	97	78.571	Cyprinodon_variegatus
ENSXMAG00000027598	SRL	53	80.357	ENSDARG00000112959	CABZ01072309.1	100	80.357	Danio_rerio
ENSXMAG00000027598	SRL	64	75.427	ENSDARG00000104587	srl	97	75.427	Danio_rerio
ENSXMAG00000027598	SRL	62	74.066	ENSDNOG00000011643	SRL	53	73.407	Dasypus_novemcinctus
ENSXMAG00000027598	SRL	62	74.286	ENSDORG00000014807	Srl	97	72.979	Dipodomys_ordii
ENSXMAG00000027598	SRL	62	74.449	ENSEASG00005000942	SRL	60	68.482	Equus_asinus_asinus
ENSXMAG00000027598	SRL	62	73.348	ENSECAG00000024219	SRL	96	72.591	Equus_caballus
ENSXMAG00000027598	SRL	68	74.044	ENSELUG00000022266	SRL	53	74.000	Esox_lucius
ENSXMAG00000027598	SRL	63	73.222	ENSELUG00000015616	srl	96	73.013	Esox_lucius
ENSXMAG00000027598	SRL	62	74.286	ENSFCAG00000022075	SRL	93	73.626	Felis_catus
ENSXMAG00000027598	SRL	62	74.172	ENSFALG00000004328	SRL	63	73.951	Ficedula_albicollis
ENSXMAG00000027598	SRL	62	73.846	ENSFDAG00000006199	SRL	94	74.286	Fukomys_damarensis
ENSXMAG00000027598	SRL	63	75.378	ENSFHEG00000011239	srl	97	75.214	Fundulus_heteroclitus
ENSXMAG00000027598	SRL	100	80.933	ENSFHEG00000011854	SRL	97	93.803	Fundulus_heteroclitus
ENSXMAG00000027598	SRL	62	73.662	ENSGMOG00000014954	srl	100	73.662	Gadus_morhua
ENSXMAG00000027598	SRL	85	58.615	ENSGALG00000038884	SRL	93	74.172	Gallus_gallus
ENSXMAG00000027598	SRL	100	97.411	ENSGAFG00000016984	SRL	100	97.248	Gambusia_affinis
ENSXMAG00000027598	SRL	63	75.810	ENSGAFG00000000010	srl	98	75.536	Gambusia_affinis
ENSXMAG00000027598	SRL	62	73.932	ENSGACG00000011332	srl	100	73.932	Gasterosteus_aculeatus
ENSXMAG00000027598	SRL	71	67.625	ENSGAGG00000015590	SRL	51	67.433	Gopherus_agassizii
ENSXMAG00000027598	SRL	62	74.505	ENSGGOG00000011312	-	97	72.340	Gorilla_gorilla
ENSXMAG00000027598	SRL	100	66.795	ENSHBUG00000015710	SRL	96	66.201	Haplochromis_burtoni
ENSXMAG00000027598	SRL	64	75.214	ENSHBUG00000007581	srl	99	75.431	Haplochromis_burtoni
ENSXMAG00000027598	SRL	62	73.626	ENSHGLG00000015271	SRL	94	74.066	Heterocephalus_glaber_female
ENSXMAG00000027598	SRL	62	73.626	ENSHGLG00100019378	SRL	94	74.066	Heterocephalus_glaber_male
ENSXMAG00000027598	SRL	100	73.514	ENSHCOG00000001012	SRL	76	72.496	Hippocampus_comes
ENSXMAG00000027598	SRL	64	74.573	ENSHCOG00000008687	srl	99	74.892	Hippocampus_comes
ENSXMAG00000027598	SRL	64	73.233	ENSIPUG00000012513	srl	97	73.019	Ictalurus_punctatus
ENSXMAG00000027598	SRL	62	71.179	ENSIPUG00000011609	SRL	100	70.961	Ictalurus_punctatus
ENSXMAG00000027598	SRL	62	74.945	ENSSTOG00000021151	-	94	74.286	Ictidomys_tridecemlineatus
ENSXMAG00000027598	SRL	62	74.286	ENSJJAG00000016400	Srl	94	74.286	Jaculus_jaculus
ENSXMAG00000027598	SRL	100	69.577	ENSKMAG00000019537	SRL	100	88.106	Kryptolebias_marmoratus
ENSXMAG00000027598	SRL	62	75.492	ENSKMAG00000014115	srl	100	73.019	Kryptolebias_marmoratus
ENSXMAG00000027598	SRL	64	74.573	ENSLBEG00000026643	srl	97	74.573	Labrus_bergylta
ENSXMAG00000027598	SRL	64	85.470	ENSLBEG00000013811	SRL	98	84.829	Labrus_bergylta
ENSXMAG00000027598	SRL	62	72.308	ENSLACG00000002825	SRL	98	72.088	Latimeria_chalumnae
ENSXMAG00000027598	SRL	62	76.044	ENSLOCG00000002644	srl	94	75.385	Lepisosteus_oculatus
ENSXMAG00000027598	SRL	62	74.066	ENSLAFG00000006329	SRL	50	73.626	Loxodonta_africana
ENSXMAG00000027598	SRL	60	73.804	ENSMFAG00000037383	SRL	99	74.260	Macaca_fascicularis
ENSXMAG00000027598	SRL	62	74.505	ENSMNEG00000019236	-	93	73.846	Macaca_nemestrina
ENSXMAG00000027598	SRL	62	67.473	ENSMLEG00000032156	SRL	96	66.596	Mandrillus_leucophaeus
ENSXMAG00000027598	SRL	62	75.274	ENSMAMG00000023322	srl	96	74.730	Mastacembelus_armatus
ENSXMAG00000027598	SRL	74	78.276	ENSMAMG00000013756	SRL	96	62.923	Mastacembelus_armatus
ENSXMAG00000027598	SRL	64	75.214	ENSMZEG00005004548	srl	99	75.431	Maylandia_zebra
ENSXMAG00000027598	SRL	100	66.197	ENSMZEG00005004010	SRL	97	65.990	Maylandia_zebra
ENSXMAG00000027598	SRL	62	74.393	ENSMGAG00000009342	SRL	92	80.822	Meleagris_gallopavo
ENSXMAG00000027598	SRL	62	74.945	ENSMICG00000032307	SRL	97	72.766	Microcebus_murinus
ENSXMAG00000027598	SRL	62	73.846	ENSMOCG00000008208	Srl	94	73.846	Microtus_ochrogaster
ENSXMAG00000027598	SRL	63	74.514	ENSMMOG00000013970	srl	100	74.514	Mola_mola
ENSXMAG00000027598	SRL	62	84.829	ENSMMOG00000021572	SRL	99	83.761	Mola_mola
ENSXMAG00000027598	SRL	62	75.771	ENSMODG00000016380	-	50	75.110	Monodelphis_domestica
ENSXMAG00000027598	SRL	59	84.491	ENSMALG00000000670	SRL	98	84.491	Monopterus_albus
ENSXMAG00000027598	SRL	63	74.298	ENSMALG00000005039	srl	99	74.138	Monopterus_albus
ENSXMAG00000027598	SRL	64	72.921	MGP_CAROLIEiJ_G0020400	Srl	95	73.434	Mus_caroli
ENSXMAG00000027598	SRL	64	72.921	ENSMUSG00000022519	Srl	95	73.434	Mus_musculus
ENSXMAG00000027598	SRL	64	72.921	MGP_SPRETEiJ_G0021294	Srl	95	73.434	Mus_spretus
ENSXMAG00000027598	SRL	62	74.286	ENSMPUG00000015025	SRL	54	73.626	Mustela_putorius_furo
ENSXMAG00000027598	SRL	69	70.138	ENSMLUG00000030733	SRL	61	69.548	Myotis_lucifugus
ENSXMAG00000027598	SRL	62	74.505	ENSNGAG00000019741	Srl	94	74.505	Nannospalax_galili
ENSXMAG00000027598	SRL	100	66.364	ENSNBRG00000002422	SRL	96	65.732	Neolamprologus_brichardi
ENSXMAG00000027598	SRL	64	75.214	ENSNBRG00000023775	srl	98	74.419	Neolamprologus_brichardi
ENSXMAG00000027598	SRL	64	67.447	ENSNLEG00000029051	SRL	96	67.872	Nomascus_leucogenys
ENSXMAG00000027598	SRL	67	66.126	ENSOPRG00000000477	-	56	65.517	Ochotona_princeps
ENSXMAG00000027598	SRL	63	73.434	ENSODEG00000013256	SRL	95	73.866	Octodon_degus
ENSXMAG00000027598	SRL	63	75.431	ENSONIG00000005192	srl	96	75.431	Oreochromis_niloticus
ENSXMAG00000027598	SRL	100	64.728	ENSORLG00000015064	SRL	98	86.334	Oryzias_latipes
ENSXMAG00000027598	SRL	63	75.162	ENSORLG00000008291	srl	93	76.413	Oryzias_latipes
ENSXMAG00000027598	SRL	63	86.768	ENSORLG00020018173	SRL	98	86.551	Oryzias_latipes_hni
ENSXMAG00000027598	SRL	63	75.378	ENSORLG00020019784	srl	81	76.658	Oryzias_latipes_hni
ENSXMAG00000027598	SRL	63	75.162	ENSORLG00015009342	srl	94	75.000	Oryzias_latipes_hsok
ENSXMAG00000027598	SRL	63	86.768	ENSORLG00015019063	SRL	98	86.117	Oryzias_latipes_hsok
ENSXMAG00000027598	SRL	63	75.594	ENSOMEG00000010006	srl	98	76.159	Oryzias_melastigma
ENSXMAG00000027598	SRL	80	81.273	ENSOMEG00000005682	SRL	66	90.239	Oryzias_melastigma
ENSXMAG00000027598	SRL	69	69.352	ENSOGAG00000029266	SRL	69	62.376	Otolemur_garnettii
ENSXMAG00000027598	SRL	62	74.009	ENSOARG00000003074	SRL	55	73.348	Ovis_aries
ENSXMAG00000027598	SRL	62	74.505	ENSPPAG00000024919	-	99	74.260	Pan_paniscus
ENSXMAG00000027598	SRL	62	73.187	ENSPPRG00000010274	SRL	99	74.260	Panthera_pardus
ENSXMAG00000027598	SRL	62	73.187	ENSPTIG00000015162	SRL	99	74.260	Panthera_tigris_altaica
ENSXMAG00000027598	SRL	62	74.505	ENSPTRG00000007712	SRL	99	74.260	Pan_troglodytes
ENSXMAG00000027598	SRL	62	73.407	ENSPANG00000013804	SRL	95	73.846	Papio_anubis
ENSXMAG00000027598	SRL	71	72.553	ENSPKIG00000024974	SRL	91	72.495	Paramormyrops_kingsleyae
ENSXMAG00000027598	SRL	63	76.242	ENSPKIG00000006405	srl	95	75.810	Paramormyrops_kingsleyae
ENSXMAG00000027598	SRL	62	83.077	ENSPMGG00000023505	-	99	82.637	Periophthalmus_magnuspinnatus
ENSXMAG00000027598	SRL	62	76.044	ENSPMGG00000021081	srl	95	76.044	Periophthalmus_magnuspinnatus
ENSXMAG00000027598	SRL	62	74.066	ENSPEMG00000015842	Srl	94	74.066	Peromyscus_maniculatus_bairdii
ENSXMAG00000027598	SRL	59	63.596	ENSPMAG00000004786	srl	99	63.371	Petromyzon_marinus
ENSXMAG00000027598	SRL	62	75.551	ENSPCIG00000012128	SRL	96	74.890	Phascolarctos_cinereus
ENSXMAG00000027598	SRL	64	73.904	ENSPFOG00000011408	srl	96	73.904	Poecilia_formosa
ENSXMAG00000027598	SRL	63	75.751	ENSPLAG00000008017	srl	98	75.751	Poecilia_latipinna
ENSXMAG00000027598	SRL	100	95.232	ENSPLAG00000002932	SRL	100	95.238	Poecilia_latipinna
ENSXMAG00000027598	SRL	100	95.504	ENSPMEG00000005890	SRL	96	95.296	Poecilia_mexicana
ENSXMAG00000027598	SRL	63	76.026	ENSPMEG00000006745	srl	98	75.751	Poecilia_mexicana
ENSXMAG00000027598	SRL	63	75.810	ENSPREG00000007751	srl	99	75.810	Poecilia_reticulata
ENSXMAG00000027598	SRL	100	94.823	ENSPREG00000000315	SRL	100	95.671	Poecilia_reticulata
ENSXMAG00000027598	SRL	60	72.912	ENSPPYG00000007053	SRL	100	73.363	Pongo_abelii
ENSXMAG00000027598	SRL	62	74.890	ENSPCAG00000003378	-	50	74.229	Procavia_capensis
ENSXMAG00000027598	SRL	63	72.222	ENSPCOG00000023135	SRL	99	74.487	Propithecus_coquereli
ENSXMAG00000027598	SRL	62	74.945	ENSPVAG00000006586	SRL	54	74.286	Pteropus_vampyrus
ENSXMAG00000027598	SRL	100	66.237	ENSPNYG00000003423	SRL	96	66.541	Pundamilia_nyererei
ENSXMAG00000027598	SRL	64	75.214	ENSPNYG00000001200	srl	99	75.431	Pundamilia_nyererei
ENSXMAG00000027598	SRL	64	76.596	ENSPNAG00000007361	-	93	76.874	Pygocentrus_nattereri
ENSXMAG00000027598	SRL	63	74.298	ENSPNAG00000023106	srl	96	74.298	Pygocentrus_nattereri
ENSXMAG00000027598	SRL	62	74.725	ENSSBOG00000029273	SRL	97	72.553	Saimiri_boliviensis_boliviensis
ENSXMAG00000027598	SRL	62	75.492	ENSSFOG00015009773	srl	96	74.946	Scleropages_formosus
ENSXMAG00000027598	SRL	82	73.961	ENSSFOG00015021327	SRL	50	72.885	Scleropages_formosus
ENSXMAG00000027598	SRL	64	74.681	ENSSMAG00000016274	srl	99	74.681	Scophthalmus_maximus
ENSXMAG00000027598	SRL	86	74.000	ENSSMAG00000002232	SRL	72	73.147	Scophthalmus_maximus
ENSXMAG00000027598	SRL	63	84.435	ENSSDUG00000009161	SRL	100	84.435	Seriola_dumerili
ENSXMAG00000027598	SRL	63	76.035	ENSSDUG00000010808	srl	98	76.035	Seriola_dumerili
ENSXMAG00000027598	SRL	63	75.922	ENSSLDG00000022024	srl	97	75.922	Seriola_lalandi_dorsalis
ENSXMAG00000027598	SRL	62	90.769	ENSSLDG00000014601	SRL	99	90.769	Seriola_lalandi_dorsalis
ENSXMAG00000027598	SRL	62	72.648	ENSSPUG00000016859	SRL	98	72.429	Sphenodon_punctatus
ENSXMAG00000027598	SRL	63	85.900	ENSSPAG00000014254	SRL	99	85.900	Stegastes_partitus
ENSXMAG00000027598	SRL	63	74.730	ENSSPAG00000019105	srl	97	74.414	Stegastes_partitus
ENSXMAG00000027598	SRL	62	73.568	ENSSSCG00000007949	SRL	98	73.789	Sus_scrofa
ENSXMAG00000027598	SRL	62	74.172	ENSTGUG00000003951	-	97	73.951	Taeniopygia_guttata
ENSXMAG00000027598	SRL	75	72.578	ENSTRUG00000013310	SRL	97	61.818	Takifugu_rubripes
ENSXMAG00000027598	SRL	64	74.786	ENSTRUG00000006005	srl	97	74.786	Takifugu_rubripes
ENSXMAG00000027598	SRL	63	74.730	ENSTNIG00000009739	srl	97	74.573	Tetraodon_nigroviridis
ENSXMAG00000027598	SRL	66	70.080	ENSUAMG00000005701	SRL	63	67.176	Ursus_americanus
ENSXMAG00000027598	SRL	66	70.080	ENSUMAG00000002574	SRL	63	67.176	Ursus_maritimus
ENSXMAG00000027598	SRL	66	69.368	ENSVVUG00000016331	-	56	67.490	Vulpes_vulpes
ENSXMAG00000027598	SRL	62	73.961	ENSXETG00000017313	srl	98	73.846	Xenopus_tropicalis
ENSXMAG00000027598	SRL	63	95.680	ENSXCOG00000014584	SRL	99	95.680	Xiphophorus_couchianus
ENSXMAG00000027598	SRL	59	76.835	ENSXCOG00000010424	srl	97	76.835	Xiphophorus_couchianus
ENSXMAG00000027598	SRL	63	75.810	ENSXMAG00000004625	srl	92	75.641	Xiphophorus_maculatus