EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000027683 (Gene tree)
Gene ID: 102236573
Gene Symbol: -
Alias: -
Full Name: small nuclear RNA activating complex polypeptide 2
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Minus strand
Length: 10408 bases
Position: chr14:3482401-3492808
Accession: 102236573
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000034313	SnAPC_2_like	PF11035.8	7.3e-88	1	2
ENSXMAP00000034313	SnAPC_2_like	PF11035.8	7.3e-88	2	2
ENSXMAP00000040726	SnAPC_2_like	PF11035.8	7.3e-88	1	2
ENSXMAP00000040726	SnAPC_2_like	PF11035.8	7.3e-88	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000031299	-	2183	-	ENSXMAP00000034313	463 (aa)	-	UPI0003B77BAC
ENSXMAT00000025318	-	2272	XM_005800090	ENSXMAP00000040726	463 (aa)	XP_005800147	UPI0003B77BAC

Gene Model

Click here to download ENSXMAG00000027683's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000027683's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000027683	-	57	42.384	ENSG00000104976	SNAPC2	81	37.179	Homo_sapiens
ENSXMAG00000027683	-	89	35.662	ENSAPOG00000000954	-	89	38.647	Acanthochromis_polyacanthus
ENSXMAG00000027683	-	65	36.943	ENSAMEG00000008622	SNAPC2	87	37.580	Ailuropoda_melanoleuca
ENSXMAG00000027683	-	67	43.784	ENSACIG00000019919	-	90	44.526	Amphilophus_citrinellus
ENSXMAG00000027683	-	80	48.628	ENSAOCG00000013265	-	92	49.487	Amphiprion_ocellaris
ENSXMAG00000027683	-	60	39.869	ENSAOCG00000012420	-	98	41.017	Amphiprion_ocellaris
ENSXMAG00000027683	-	99	45.363	ENSAPEG00000010950	-	99	45.951	Amphiprion_percula
ENSXMAG00000027683	-	87	49.153	ENSATEG00000003573	-	76	49.776	Anabas_testudineus
ENSXMAG00000027683	-	57	38.525	ENSACAG00000026540	-	79	38.525	Anolis_carolinensis
ENSXMAG00000027683	-	63	38.514	ENSANAG00000029939	SNAPC2	81	38.095	Aotus_nancymaae
ENSXMAG00000027683	-	68	51.880	ENSACLG00000013092	-	99	41.379	Astatotilapia_calliptera
ENSXMAG00000027683	-	63	38.857	ENSAMXG00000038205	snapc2	70	37.714	Astyanax_mexicanus
ENSXMAG00000027683	-	70	40.000	ENSBTAG00000014926	SNAPC2	94	39.310	Bos_taurus
ENSXMAG00000027683	-	63	36.508	ENSCJAG00000006117	SNAPC2	92	35.638	Callithrix_jacchus
ENSXMAG00000027683	-	64	41.935	ENSCAFG00000031676	SNAPC2	84	38.710	Canis_familiaris
ENSXMAG00000027683	-	64	41.935	ENSCAFG00020022851	SNAPC2	84	38.710	Canis_lupus_dingo
ENSXMAG00000027683	-	51	41.573	ENSTSYG00000037088	SNAPC2	72	48.571	Carlito_syrichta
ENSXMAG00000027683	-	57	38.514	ENSCCAG00000034172	SNAPC2	81	36.538	Cebus_capucinus
ENSXMAG00000027683	-	57	38.961	ENSCATG00000037131	SNAPC2	81	37.179	Cercocebus_atys
ENSXMAG00000027683	-	66	36.548	ENSCSAG00000008167	SNAPC2	91	34.518	Chlorocebus_sabaeus
ENSXMAG00000027683	-	67	35.784	ENSCPBG00000002277	SNAPC2	57	52.000	Chrysemys_picta_bellii
ENSXMAG00000027683	-	82	36.548	ENSCANG00000040525	SNAPC2	98	36.224	Colobus_angolensis_palliatus
ENSXMAG00000027683	-	71	32.828	ENSCGRG00001006223	Snapc2	88	35.106	Cricetulus_griseus_chok1gshd
ENSXMAG00000027683	-	80	47.043	ENSCVAG00000011360	-	99	48.387	Cyprinodon_variegatus
ENSXMAG00000027683	-	64	35.000	ENSDNOG00000036458	SNAPC2	84	35.000	Dasypus_novemcinctus
ENSXMAG00000027683	-	61	34.503	ENSDORG00000009155	Snapc2	80	34.454	Dipodomys_ordii
ENSXMAG00000027683	-	64	39.310	ENSETEG00000012986	SNAPC2	86	38.621	Echinops_telfairi
ENSXMAG00000027683	-	63	38.095	ENSEASG00005003809	SNAPC2	77	38.095	Equus_asinus_asinus
ENSXMAG00000027683	-	63	38.776	ENSECAG00000011011	SNAPC2	80	38.776	Equus_caballus
ENSXMAG00000027683	-	64	38.816	ENSFCAG00000014945	SNAPC2	83	38.312	Felis_catus
ENSXMAG00000027683	-	57	40.816	ENSGGOG00000022392	SNAPC2	91	33.987	Gorilla_gorilla
ENSXMAG00000027683	-	99	41.489	ENSHCOG00000002795	-	98	40.957	Hippocampus_comes
ENSXMAG00000027683	-	63	37.162	ENSSTOG00000009102	SNAPC2	84	35.811	Ictidomys_tridecemlineatus
ENSXMAG00000027683	-	68	35.669	ENSJJAG00000003060	Snapc2	87	35.669	Jaculus_jaculus
ENSXMAG00000027683	-	99	45.380	ENSKMAG00000007231	-	99	44.632	Kryptolebias_marmoratus
ENSXMAG00000027683	-	70	37.013	ENSLOCG00000014065	snapc2	95	35.714	Lepisosteus_oculatus
ENSXMAG00000027683	-	66	37.563	ENSMFAG00000034273	SNAPC2	91	36.041	Macaca_fascicularis
ENSXMAG00000027683	-	66	37.056	ENSMMUG00000006540	SNAPC2	91	35.678	Macaca_mulatta
ENSXMAG00000027683	-	66	37.113	ENSMNEG00000039547	SNAPC2	90	35.714	Macaca_nemestrina
ENSXMAG00000027683	-	57	38.961	ENSMLEG00000031059	SNAPC2	91	34.673	Mandrillus_leucophaeus
ENSXMAG00000027683	-	80	41.527	ENSMZEG00005009488	-	99	41.176	Maylandia_zebra
ENSXMAG00000027683	-	64	38.065	ENSMICG00000035695	SNAPC2	88	32.692	Microcebus_murinus
ENSXMAG00000027683	-	72	36.269	ENSMOCG00000019080	Snapc2	90	36.269	Microtus_ochrogaster
ENSXMAG00000027683	-	80	39.623	ENSMMOG00000020608	-	85	39.572	Mola_mola
ENSXMAG00000027683	-	59	34.426	ENSMODG00000005069	-	84	34.426	Monodelphis_domestica
ENSXMAG00000027683	-	73	55.034	ENSMALG00000002335	-	96	55.034	Monopterus_albus
ENSXMAG00000027683	-	70	30.719	MGP_CAROLIEiJ_G0030795	Snapc2	92	30.719	Mus_caroli
ENSXMAG00000027683	-	70	30.097	ENSMUSG00000011837	Snapc2	77	33.582	Mus_musculus
ENSXMAG00000027683	-	70	31.068	MGP_SPRETEiJ_G0031903	Snapc2	92	30.732	Mus_spretus
ENSXMAG00000027683	-	63	36.025	ENSMPUG00000008010	SNAPC2	89	33.166	Mustela_putorius_furo
ENSXMAG00000027683	-	57	34.177	ENSMLUG00000013689	-	85	34.177	Myotis_lucifugus
ENSXMAG00000027683	-	53	37.748	ENSNGAG00000014201	Snapc2	88	34.615	Nannospalax_galili
ENSXMAG00000027683	-	73	50.376	ENSNBRG00000003764	-	89	48.592	Neolamprologus_brichardi
ENSXMAG00000027683	-	57	42.384	ENSNLEG00000001250	SNAPC2	81	37.179	Nomascus_leucogenys
ENSXMAG00000027683	-	57	36.301	ENSMEUG00000014367	SNAPC2	73	35.172	Notamacropus_eugenii
ENSXMAG00000027683	-	63	37.255	ENSODEG00000011415	SNAPC2	76	37.255	Octodon_degus
ENSXMAG00000027683	-	57	40.127	ENSOCUG00000027536	SNAPC2	65	40.127	Oryctolagus_cuniculus
ENSXMAG00000027683	-	99	41.542	ENSORLG00020015071	-	98	41.401	Oryzias_latipes_hni
ENSXMAG00000027683	-	66	38.037	ENSOGAG00000012870	SNAPC2	90	36.646	Otolemur_garnettii
ENSXMAG00000027683	-	64	37.908	ENSPPRG00000003265	SNAPC2	83	36.842	Panthera_pardus
ENSXMAG00000027683	-	57	42.384	ENSPTRG00000042034	SNAPC2	81	37.179	Pan_troglodytes
ENSXMAG00000027683	-	66	36.548	ENSPANG00000025882	SNAPC2	91	35.176	Papio_anubis
ENSXMAG00000027683	-	77	34.715	ENSPEMG00000009767	Snapc2	96	34.715	Peromyscus_maniculatus_bairdii
ENSXMAG00000027683	-	100	82.403	ENSPFOG00000012045	-	100	82.618	Poecilia_formosa
ENSXMAG00000027683	-	100	82.403	ENSPLAG00000018873	-	100	83.942	Poecilia_latipinna
ENSXMAG00000027683	-	100	83.047	ENSPMEG00000002270	-	100	85.401	Poecilia_mexicana
ENSXMAG00000027683	-	100	84.335	ENSPREG00000003140	-	100	84.335	Poecilia_reticulata
ENSXMAG00000027683	-	57	42.384	ENSPPYG00000009494	SNAPC2	91	34.171	Pongo_abelii
ENSXMAG00000027683	-	67	38.554	ENSPCOG00000026672	SNAPC2	89	37.209	Propithecus_coquereli
ENSXMAG00000027683	-	59	37.333	ENSRNOG00000001056	Snapc2	75	37.333	Rattus_norvegicus
ENSXMAG00000027683	-	73	38.312	ENSRBIG00000044314	SNAPC2	90	37.179	Rhinopithecus_bieti
ENSXMAG00000027683	-	73	39.073	ENSRROG00000043480	SNAPC2	90	37.179	Rhinopithecus_roxellana
ENSXMAG00000027683	-	57	40.136	ENSSBOG00000011587	SNAPC2	81	37.179	Saimiri_boliviensis_boliviensis
ENSXMAG00000027683	-	61	50.562	ENSSMAG00000009095	-	95	50.562	Scophthalmus_maximus
ENSXMAG00000027683	-	99	39.201	ENSSDUG00000016949	-	100	33.477	Seriola_dumerili
ENSXMAG00000027683	-	87	39.825	ENSSPAG00000008637	-	97	40.092	Stegastes_partitus
ENSXMAG00000027683	-	73	41.379	ENSSSCG00000013589	SNAPC2	92	38.776	Sus_scrofa
ENSXMAG00000027683	-	63	44.715	ENSTRUG00000005122	-	100	44.715	Takifugu_rubripes
ENSXMAG00000027683	-	63	37.975	ENSTTRG00000010165	SNAPC2	82	38.776	Tursiops_truncatus
ENSXMAG00000027683	-	65	35.897	ENSUAMG00000021489	SNAPC2	85	35.897	Ursus_americanus
ENSXMAG00000027683	-	64	40.645	ENSVVUG00000026998	SNAPC2	84	37.576	Vulpes_vulpes