EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000027742 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 4797 bases
Position: chr14:24304470-24309266
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000035786	zf-C2H2	PF00096.26	2.4e-17	1	3
ENSXMAP00000035786	zf-C2H2	PF00096.26	2.4e-17	2	3
ENSXMAP00000035786	zf-C2H2	PF00096.26	2.4e-17	3	3
ENSXMAP00000033384	zf-C2H2	PF00096.26	9.6e-17	1	3
ENSXMAP00000033384	zf-C2H2	PF00096.26	9.6e-17	2	3
ENSXMAP00000033384	zf-C2H2	PF00096.26	9.6e-17	3	3
ENSXMAP00000035786	zf-met	PF12874.7	5.1e-08	1	1
ENSXMAP00000033384	zf-met	PF12874.7	2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000040216	-	1062	-	ENSXMAP00000033384	353 (aa)	-	-
ENSXMAT00000029028	-	735	-	ENSXMAP00000035786	244 (aa)	-	-

Gene Model

Click here to download ENSXMAG00000027742's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000027742's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000027742	-	51	41.818	ENSAPOG00000018480	-	71	40.678	Acanthochromis_polyacanthus
ENSXMAG00000027742	-	79	38.667	ENSAMEG00000003802	-	64	45.783	Ailuropoda_melanoleuca
ENSXMAG00000027742	-	65	40.909	ENSACIG00000004626	-	77	48.315	Amphilophus_citrinellus
ENSXMAG00000027742	-	50	44.578	ENSACIG00000003515	-	85	43.750	Amphilophus_citrinellus
ENSXMAG00000027742	-	84	48.837	ENSACIG00000017050	-	97	55.556	Amphilophus_citrinellus
ENSXMAG00000027742	-	99	43.939	ENSAPEG00000005566	-	98	43.939	Amphiprion_percula
ENSXMAG00000027742	-	99	35.211	ENSATEG00000008771	-	83	33.596	Anabas_testudineus
ENSXMAG00000027742	-	91	47.674	ENSACLG00000011237	-	100	48.673	Astatotilapia_calliptera
ENSXMAG00000027742	-	59	51.327	ENSACLG00000023979	-	93	51.327	Astatotilapia_calliptera
ENSXMAG00000027742	-	52	41.250	ENSACLG00000017849	-	69	40.157	Astatotilapia_calliptera
ENSXMAG00000027742	-	60	52.941	ENSACLG00000024647	-	74	38.605	Astatotilapia_calliptera
ENSXMAG00000027742	-	73	46.154	ENSACLG00000024308	-	98	52.586	Astatotilapia_calliptera
ENSXMAG00000027742	-	77	41.053	ENSAMXG00000037382	-	76	33.824	Astyanax_mexicanus
ENSXMAG00000027742	-	80	43.519	ENSCSEG00000003757	-	61	51.389	Cynoglossus_semilaevis
ENSXMAG00000027742	-	50	35.802	ENSCSEG00000014637	-	82	35.802	Cynoglossus_semilaevis
ENSXMAG00000027742	-	79	37.611	ENSCVAG00000019705	-	84	36.822	Cyprinodon_variegatus
ENSXMAG00000027742	-	75	47.674	ENSCVAG00000022991	-	98	47.414	Cyprinodon_variegatus
ENSXMAG00000027742	-	99	49.242	ENSCVAG00000007073	-	93	47.748	Cyprinodon_variegatus
ENSXMAG00000027742	-	77	46.988	ENSCVAG00000021107	-	91	50.000	Cyprinodon_variegatus
ENSXMAG00000027742	-	81	44.000	ENSFHEG00000018874	-	79	43.689	Fundulus_heteroclitus
ENSXMAG00000027742	-	81	49.558	ENSFHEG00000013794	-	95	48.276	Fundulus_heteroclitus
ENSXMAG00000027742	-	80	51.765	ENSFHEG00000016640	-	91	42.000	Fundulus_heteroclitus
ENSXMAG00000027742	-	81	35.793	ENSFHEG00000013530	-	82	35.793	Fundulus_heteroclitus
ENSXMAG00000027742	-	99	50.794	ENSGAFG00000010524	-	99	50.794	Gambusia_affinis
ENSXMAG00000027742	-	86	45.528	ENSGAFG00000018645	-	98	45.528	Gambusia_affinis
ENSXMAG00000027742	-	89	52.101	ENSGAFG00000011288	-	100	52.101	Gambusia_affinis
ENSXMAG00000027742	-	89	45.556	ENSHBUG00000006977	-	99	35.514	Haplochromis_burtoni
ENSXMAG00000027742	-	54	45.133	ENSHBUG00000017869	-	99	45.133	Haplochromis_burtoni
ENSXMAG00000027742	-	82	55.128	ENSHCOG00000001448	-	93	42.857	Hippocampus_comes
ENSXMAG00000027742	-	77	32.982	ENSHCOG00000002969	-	72	43.548	Hippocampus_comes
ENSXMAG00000027742	-	85	44.828	ENSHCOG00000015414	-	93	44.828	Hippocampus_comes
ENSXMAG00000027742	-	93	42.623	ENSHCOG00000014796	-	98	42.623	Hippocampus_comes
ENSXMAG00000027742	-	99	40.517	ENSHCOG00000001942	-	99	40.517	Hippocampus_comes
ENSXMAG00000027742	-	62	35.526	ENSHCOG00000015459	-	78	35.526	Hippocampus_comes
ENSXMAG00000027742	-	77	39.175	ENSHCOG00000000627	-	84	46.903	Hippocampus_comes
ENSXMAG00000027742	-	51	46.512	ENSHCOG00000001631	-	92	47.414	Hippocampus_comes
ENSXMAG00000027742	-	85	50.617	ENSKMAG00000000795	-	77	50.909	Kryptolebias_marmoratus
ENSXMAG00000027742	-	75	48.333	ENSKMAG00000000371	-	97	48.333	Kryptolebias_marmoratus
ENSXMAG00000027742	-	71	47.170	ENSKMAG00000007672	-	98	47.170	Kryptolebias_marmoratus
ENSXMAG00000027742	-	53	46.914	ENSLBEG00000009580	-	70	47.788	Labrus_bergylta
ENSXMAG00000027742	-	58	34.862	ENSLBEG00000024536	-	86	51.190	Labrus_bergylta
ENSXMAG00000027742	-	82	48.485	ENSMAMG00000022145	-	65	48.485	Mastacembelus_armatus
ENSXMAG00000027742	-	53	48.750	ENSMZEG00005024426	-	61	48.387	Maylandia_zebra
ENSXMAG00000027742	-	99	48.148	ENSMALG00000012043	-	93	44.915	Monopterus_albus
ENSXMAG00000027742	-	99	47.458	ENSONIG00000016734	-	99	41.121	Oreochromis_niloticus
ENSXMAG00000027742	-	83	50.000	ENSORLG00000024174	-	97	47.748	Oryzias_latipes
ENSXMAG00000027742	-	87	50.833	ENSORLG00015011871	-	84	50.833	Oryzias_latipes_hsok
ENSXMAG00000027742	-	59	35.374	ENSPMGG00000006070	-	85	47.059	Periophthalmus_magnuspinnatus
ENSXMAG00000027742	-	86	44.872	ENSPMGG00000014783	-	54	49.550	Periophthalmus_magnuspinnatus
ENSXMAG00000027742	-	58	47.312	ENSPMGG00000000636	-	64	47.475	Periophthalmus_magnuspinnatus
ENSXMAG00000027742	-	89	42.708	ENSPMGG00000006845	-	80	45.238	Periophthalmus_magnuspinnatus
ENSXMAG00000027742	-	60	56.098	ENSPFOG00000005449	-	99	54.310	Poecilia_formosa
ENSXMAG00000027742	-	85	44.048	ENSPFOG00000024470	-	97	41.176	Poecilia_formosa
ENSXMAG00000027742	-	89	52.101	ENSPFOG00000007919	-	100	52.101	Poecilia_formosa
ENSXMAG00000027742	-	87	53.405	ENSPFOG00000001339	-	99	53.153	Poecilia_formosa
ENSXMAG00000027742	-	76	36.264	ENSPLAG00000015603	-	91	35.531	Poecilia_latipinna
ENSXMAG00000027742	-	52	40.000	ENSPMEG00000014688	-	72	40.000	Poecilia_mexicana
ENSXMAG00000027742	-	52	43.000	ENSPMEG00000015345	-	92	43.000	Poecilia_mexicana
ENSXMAG00000027742	-	55	46.377	ENSPMEG00000015696	-	96	46.961	Poecilia_mexicana
ENSXMAG00000027742	-	79	51.724	ENSPMEG00000023808	-	93	51.724	Poecilia_mexicana
ENSXMAG00000027742	-	70	36.471	ENSPMEG00000021016	-	81	35.385	Poecilia_mexicana
ENSXMAG00000027742	-	50	43.750	ENSPREG00000019161	-	84	50.000	Poecilia_reticulata
ENSXMAG00000027742	-	89	46.067	ENSPNYG00000018372	-	79	33.239	Pundamilia_nyererei
ENSXMAG00000027742	-	85	48.913	ENSPNYG00000018920	-	96	53.448	Pundamilia_nyererei
ENSXMAG00000027742	-	89	30.556	ENSPNYG00000000700	-	100	45.570	Pundamilia_nyererei
ENSXMAG00000027742	-	77	33.684	ENSSDUG00000004867	-	92	51.250	Seriola_dumerili
ENSXMAG00000027742	-	65	50.000	ENSSDUG00000007336	-	98	50.000	Seriola_dumerili
ENSXMAG00000027742	-	99	39.496	ENSSDUG00000009425	-	99	41.667	Seriola_dumerili
ENSXMAG00000027742	-	66	45.882	ENSSDUG00000015622	-	85	42.069	Seriola_dumerili
ENSXMAG00000027742	-	76	52.326	ENSSLDG00000005850	-	94	45.714	Seriola_lalandi_dorsalis
ENSXMAG00000027742	-	78	39.286	ENSSPAG00000005739	-	61	39.286	Stegastes_partitus
ENSXMAG00000027742	-	69	46.429	ENSXCOG00000009777	-	91	46.429	Xiphophorus_couchianus
ENSXMAG00000027742	-	89	48.837	ENSXCOG00000007957	-	93	49.206	Xiphophorus_couchianus
ENSXMAG00000027742	-	97	51.261	ENSXCOG00000016860	-	97	51.261	Xiphophorus_couchianus
ENSXMAG00000027742	-	80	46.957	ENSXCOG00000007406	-	99	48.214	Xiphophorus_couchianus
ENSXMAG00000027742	-	82	45.690	ENSXMAG00000026477	-	98	32.911	Xiphophorus_maculatus
ENSXMAG00000027742	-	87	43.878	ENSXMAG00000024641	-	99	49.138	Xiphophorus_maculatus
ENSXMAG00000027742	-	81	52.941	ENSXMAG00000020039	-	94	47.414	Xiphophorus_maculatus
ENSXMAG00000027742	-	67	64.583	ENSXMAG00000027906	-	97	58.175	Xiphophorus_maculatus
ENSXMAG00000027742	-	61	50.000	ENSXMAG00000025344	-	90	53.448	Xiphophorus_maculatus
ENSXMAG00000027742	-	69	46.429	ENSXMAG00000021759	-	91	46.429	Xiphophorus_maculatus
ENSXMAG00000027742	-	86	47.312	ENSXMAG00000026679	-	98	68.254	Xiphophorus_maculatus