EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000027787 (Gene tree)
Gene ID: 102231156
Gene Symbol: RAB41
Alias: -
Full Name: ras-related protein Rab-6A
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Minus strand
Length: 9059 bases
Position: chr23:7187326-7196384
Accession: 102231156
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000040528	MMR_HSR1	PF01926.23	7.9e-05	1	1
ENSXMAP00000038379	MMR_HSR1	PF01926.23	0.0001	1	1
ENSXMAP00000028465	MMR_HSR1	PF01926.23	0.00011	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000034788	RAB41-201	1523	XM_005799499	ENSXMAP00000038379	211 (aa)	XP_005799556	M4AFS1
ENSXMAT00000034480	RAB41-202	636	XM_023328744	ENSXMAP00000028465	211 (aa)	XP_023184512	UPI00022AFD3B
ENSXMAT00000024309	RAB41-203	636	XM_005799501	ENSXMAP00000040528	211 (aa)	XP_005799558	UPI0000E3E361

Gene Model

Click here to download ENSXMAG00000027787's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000027787's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000027787	RAB41	100	100.000	ENSACIG00000010914	RAB41	100	100.000	Amphilophus_citrinellus
ENSXMAG00000027787	RAB41	100	100.000	ENSAOCG00000022426	RAB41	100	100.000	Amphiprion_ocellaris
ENSXMAG00000027787	RAB41	100	100.000	ENSAPEG00000007931	RAB41	100	100.000	Amphiprion_percula
ENSXMAG00000027787	RAB41	94	70.707	ENSTSYG00000000768	RAB41	87	70.707	Carlito_syrichta
ENSXMAG00000027787	RAB41	93	67.005	ENSCATG00000037380	RAB41	87	67.005	Cercocebus_atys
ENSXMAG00000027787	RAB41	100	96.209	ENSCPBG00000014340	RAB41	100	96.209	Chrysemys_picta_bellii
ENSXMAG00000027787	RAB41	100	100.000	ENSFHEG00000015996	RAB41	100	100.000	Fundulus_heteroclitus
ENSXMAG00000027787	RAB41	100	100.000	ENSHBUG00000014338	RAB41	100	100.000	Haplochromis_burtoni
ENSXMAG00000027787	RAB41	100	100.000	ENSLBEG00000008746	RAB41	100	100.000	Labrus_bergylta
ENSXMAG00000027787	RAB41	93	68.528	ENSMFAG00000000762	RAB41	87	68.528	Macaca_fascicularis
ENSXMAG00000027787	RAB41	93	68.528	ENSMMUG00000013937	RAB41	87	68.528	Macaca_mulatta
ENSXMAG00000027787	RAB41	93	68.020	ENSMNEG00000045569	RAB41	87	68.020	Macaca_nemestrina
ENSXMAG00000027787	RAB41	91	67.358	ENSMLEG00000038149	RAB41	86	67.358	Mandrillus_leucophaeus
ENSXMAG00000027787	RAB41	100	99.528	ENSONIG00000002774	RAB41	100	99.528	Oreochromis_niloticus
ENSXMAG00000027787	RAB41	100	99.052	ENSORLG00000027669	RAB41	100	99.052	Oryzias_latipes
ENSXMAG00000027787	RAB41	100	99.052	ENSORLG00015010161	RAB41	100	99.052	Oryzias_latipes_hsok
ENSXMAG00000027787	RAB41	100	99.052	ENSOMEG00000017258	RAB41	100	99.052	Oryzias_melastigma
ENSXMAG00000027787	RAB41	93	68.020	ENSPANG00000007317	RAB41	87	68.020	Papio_anubis
ENSXMAG00000027787	RAB41	99	94.737	ENSPKIG00000014618	-	99	94.737	Paramormyrops_kingsleyae
ENSXMAG00000027787	RAB41	100	100.000	ENSPMGG00000017830	RAB41	100	100.000	Periophthalmus_magnuspinnatus
ENSXMAG00000027787	RAB41	100	100.000	ENSPFOG00000011424	RAB41	100	100.000	Poecilia_formosa
ENSXMAG00000027787	RAB41	100	100.000	ENSPREG00000009535	RAB41	100	100.000	Poecilia_reticulata
ENSXMAG00000027787	RAB41	93	68.528	ENSRBIG00000027991	RAB41	87	68.528	Rhinopithecus_bieti
ENSXMAG00000027787	RAB41	99	98.565	ENSSFOG00015011268	RAB41	99	98.565	Scleropages_formosus
ENSXMAG00000027787	RAB41	100	98.131	ENSTNIG00000016831	RAB41	100	98.131	Tetraodon_nigroviridis
ENSXMAG00000027787	RAB41	99	96.172	ENSXETG00000030938	rab41	99	96.172	Xenopus_tropicalis
ENSXMAG00000027787	RAB41	100	100.000	ENSXCOG00000015802	RAB41	100	100.000	Xiphophorus_couchianus