EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSXMAG00000027885 (Gene tree)
Gene ID
102233766
Gene Symbol
scrt1b
Alias
zgc:113646
Full Name
transcriptional repressor scratch 1-like
Gene Type
protein_coding
Species
Xiphophorus_maculatus
Status
putative
Strand
Minus strand
Length
8059 bases
Position
chr3:16382147-16390205
Accession
102233766
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSXMAP00000036200zf-C2H2PF00096.261.9e-2514
ENSXMAP00000036200zf-C2H2PF00096.261.9e-2524
ENSXMAP00000036200zf-C2H2PF00096.261.9e-2534
ENSXMAP00000036200zf-C2H2PF00096.261.9e-2544
ENSXMAP00000036200zf-metPF12874.75.8e-0911
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSXMAT00000036107-843XM_005804672ENSXMAP00000036200280 (aa)XP_005804729M4AJ74
Gene Model
Click here to download ENSXMAG00000027885's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000027885's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSXMAG00000027885scrt1b9670.290ENSAPOG00000003680scrt29670.290Acanthochromis_polyacanthus
ENSXMAG00000027885scrt1b9978.322ENSAPOG00000015197-9978.322Acanthochromis_polyacanthus
ENSXMAG00000027885scrt1b10097.500ENSAPOG00000009279scrt1b10097.500Acanthochromis_polyacanthus
ENSXMAG00000027885scrt1b9657.475ENSACIG00000001296-9657.285Amphilophus_citrinellus
ENSXMAG00000027885scrt1b10093.214ENSACIG00000013613scrt1b10093.214Amphilophus_citrinellus
ENSXMAG00000027885scrt1b9976.333ENSACIG00000006586-9976.333Amphilophus_citrinellus
ENSXMAG00000027885scrt1b9669.203ENSACIG00000012604scrt29669.203Amphilophus_citrinellus
ENSXMAG00000027885scrt1b9670.290ENSAOCG00000021557scrt29670.290Amphiprion_ocellaris
ENSXMAG00000027885scrt1b10097.500ENSAOCG00000003910scrt1b10097.500Amphiprion_ocellaris
ENSXMAG00000027885scrt1b9976.667ENSAOCG00000023304-9976.667Amphiprion_ocellaris
ENSXMAG00000027885scrt1b9976.667ENSAPEG00000005677-9976.667Amphiprion_percula
ENSXMAG00000027885scrt1b9670.290ENSAPEG00000022558scrt29670.290Amphiprion_percula
ENSXMAG00000027885scrt1b10097.857ENSAPEG00000000869scrt1b10097.857Amphiprion_percula
ENSXMAG00000027885scrt1b9977.273ENSATEG00000011660-9977.273Anabas_testudineus
ENSXMAG00000027885scrt1b9665.049ENSATEG00000023998scrt29765.049Anabas_testudineus
ENSXMAG00000027885scrt1b10096.071ENSATEG00000002302scrt1b10096.071Anabas_testudineus
ENSXMAG00000027885scrt1b9654.633ENSATEG00000003195-9754.633Anabas_testudineus
ENSXMAG00000027885scrt1b7676.995ENSACAG00000016109SCRT29576.995Anolis_carolinensis
ENSXMAG00000027885scrt1b9972.937ENSACLG00000012046-9972.937Astatotilapia_calliptera
ENSXMAG00000027885scrt1b10096.429ENSACLG00000007162scrt1b10096.429Astatotilapia_calliptera
ENSXMAG00000027885scrt1b8374.059ENSAMXG00000034158scrt28774.059Astyanax_mexicanus
ENSXMAG00000027885scrt1b9882.734ENSAMXG00000042624SCRT19982.734Astyanax_mexicanus
ENSXMAG00000027885scrt1b10083.214ENSAMXG00000038085scrt1a10083.986Astyanax_mexicanus
ENSXMAG00000027885scrt1b5862.963WBGene00000468ces-16062.195Caenorhabditis_elegans
ENSXMAG00000027885scrt1b8661.355ENSCPBG00000027613SCRT210061.355Chrysemys_picta_bellii
ENSXMAG00000027885scrt1b9983.571ENSCPBG00000018899SCRT19983.571Chrysemys_picta_bellii
ENSXMAG00000027885scrt1b9666.997ENSCSEG00000021542scrt29666.997Cynoglossus_semilaevis
ENSXMAG00000027885scrt1b10095.357ENSCSEG00000008596scrt1b10095.357Cynoglossus_semilaevis
ENSXMAG00000027885scrt1b9877.104ENSCSEG00000014892-9877.104Cynoglossus_semilaevis
ENSXMAG00000027885scrt1b9976.667ENSCVAG00000003190-9976.667Cyprinodon_variegatus
ENSXMAG00000027885scrt1b9664.725ENSCVAG00000021038scrt29764.725Cyprinodon_variegatus
ENSXMAG00000027885scrt1b10098.571ENSCVAG00000009561scrt1b10098.571Cyprinodon_variegatus
ENSXMAG00000027885scrt1b10086.477ENSDARG00000040214scrt1b10086.477Danio_rerio
ENSXMAG00000027885scrt1b10085.409ENSDARG00000100821scrt1a10085.409Danio_rerio
ENSXMAG00000027885scrt1b9987.770ENSELUG00000005435scrt1b9987.770Esox_lucius
ENSXMAG00000027885scrt1b9765.667ENSELUG00000023883scrt29667.000Esox_lucius
ENSXMAG00000027885scrt1b9984.946ENSELUG00000022228scrt1a9984.946Esox_lucius
ENSXMAG00000027885scrt1b8271.861ENSFALG00000005718SCRT29671.861Ficedula_albicollis
ENSXMAG00000027885scrt1b9661.765ENSFDAG00000008733SCRT19761.765Fukomys_damarensis
ENSXMAG00000027885scrt1b10098.214ENSFHEG00000014820scrt1b10098.214Fundulus_heteroclitus
ENSXMAG00000027885scrt1b9671.739ENSFHEG00000005732scrt29671.739Fundulus_heteroclitus
ENSXMAG00000027885scrt1b9977.000ENSFHEG00000009794-9977.000Fundulus_heteroclitus
ENSXMAG00000027885scrt1b9660.841ENSGMOG00000019519scrt29560.841Gadus_morhua
ENSXMAG00000027885scrt1b9992.832ENSGMOG00000000629scrt1b10092.832Gadus_morhua
ENSXMAG00000027885scrt1b9665.201ENSGALG00000028912SCRT29765.201Gallus_gallus
ENSXMAG00000027885scrt1b9668.243ENSGAFG00000003093scrt29668.243Gambusia_affinis
ENSXMAG00000027885scrt1b9976.950ENSGAFG00000009650-9976.950Gambusia_affinis
ENSXMAG00000027885scrt1b10099.643ENSGAFG00000007636scrt1b10099.643Gambusia_affinis
ENSXMAG00000027885scrt1b9992.832ENSGACG00000008982scrt1b9992.832Gasterosteus_aculeatus
ENSXMAG00000027885scrt1b9973.986ENSGACG00000004072-9973.986Gasterosteus_aculeatus
ENSXMAG00000027885scrt1b6579.459ENSGAGG00000020760-7179.459Gopherus_agassizii
ENSXMAG00000027885scrt1b9664.706ENSGAGG00000020761SCRT29664.706Gopherus_agassizii
ENSXMAG00000027885scrt1b9984.532ENSGAGG00000011736SCRT110084.532Gopherus_agassizii
ENSXMAG00000027885scrt1b9975.333ENSHBUG00000019101-9975.333Haplochromis_burtoni
ENSXMAG00000027885scrt1b10096.429ENSHBUG00000016621scrt1b10096.429Haplochromis_burtoni
ENSXMAG00000027885scrt1b9670.290ENSHBUG00000012492scrt29670.290Haplochromis_burtoni
ENSXMAG00000027885scrt1b10094.643ENSHCOG00000016704scrt1b10094.643Hippocampus_comes
ENSXMAG00000027885scrt1b9968.621ENSHCOG00000016179-9968.621Hippocampus_comes
ENSXMAG00000027885scrt1b9666.327ENSHCOG00000008116scrt29666.327Hippocampus_comes
ENSXMAG00000027885scrt1b9880.364ENSIPUG00000005547-9980.364Ictalurus_punctatus
ENSXMAG00000027885scrt1b9985.305ENSIPUG00000004551scrt1a9985.305Ictalurus_punctatus
ENSXMAG00000027885scrt1b5085.106ENSSTOG00000032944SCRT28480.255Ictidomys_tridecemlineatus
ENSXMAG00000027885scrt1b10098.929ENSKMAG00000005484scrt1b10098.929Kryptolebias_marmoratus
ENSXMAG00000027885scrt1b9975.000ENSKMAG00000009489-9976.667Kryptolebias_marmoratus
ENSXMAG00000027885scrt1b9666.667ENSKMAG00000018087scrt29766.667Kryptolebias_marmoratus
ENSXMAG00000027885scrt1b9974.161ENSLBEG00000023388-9974.832Labrus_bergylta
ENSXMAG00000027885scrt1b9664.516ENSLBEG00000015419scrt29764.194Labrus_bergylta
ENSXMAG00000027885scrt1b10083.986ENSLACG00000003588SCRT19983.986Latimeria_chalumnae
ENSXMAG00000027885scrt1b9655.016ENSLOCG00000002246scrt29755.128Lepisosteus_oculatus
ENSXMAG00000027885scrt1b10087.544ENSLOCG00000007573scrt1b10087.544Lepisosteus_oculatus
ENSXMAG00000027885scrt1b9694.074ENSMFAG00000035496SCRT17882.036Macaca_fascicularis
ENSXMAG00000027885scrt1b9665.049ENSMAMG00000001291scrt29764.401Mastacembelus_armatus
ENSXMAG00000027885scrt1b10097.143ENSMAMG00000011698scrt1b10097.143Mastacembelus_armatus
ENSXMAG00000027885scrt1b9670.290ENSMZEG00005026445scrt29670.290Maylandia_zebra
ENSXMAG00000027885scrt1b9975.333ENSMZEG00005026702-9975.333Maylandia_zebra
ENSXMAG00000027885scrt1b10096.429ENSMZEG00005005627scrt1b10096.429Maylandia_zebra
ENSXMAG00000027885scrt1b8370.130ENSMGAG00000016579SCRT29670.435Meleagris_gallopavo
ENSXMAG00000027885scrt1b10095.000ENSMMOG00000003327scrt1b10095.000Mola_mola
ENSXMAG00000027885scrt1b9976.667ENSMMOG00000018345-9976.667Mola_mola
ENSXMAG00000027885scrt1b9665.686ENSMMOG00000009272scrt29765.359Mola_mola
ENSXMAG00000027885scrt1b9669.176ENSMALG00000013656scrt29669.176Monopterus_albus
ENSXMAG00000027885scrt1b10097.143ENSMALG00000012704scrt1b10097.143Monopterus_albus
ENSXMAG00000027885scrt1b6469.022ENSNGAG00000020815Scrt29367.526Nannospalax_galili
ENSXMAG00000027885scrt1b10091.071ENSNBRG00000013983scrt1b10091.071Neolamprologus_brichardi
ENSXMAG00000027885scrt1b9669.928ENSNBRG00000007221scrt29669.928Neolamprologus_brichardi
ENSXMAG00000027885scrt1b9975.667ENSNBRG00000014882-9975.667Neolamprologus_brichardi
ENSXMAG00000027885scrt1b9664.725ENSONIG00000016758scrt29764.725Oreochromis_niloticus
ENSXMAG00000027885scrt1b9672.549ENSONIG00000019809-9972.549Oreochromis_niloticus
ENSXMAG00000027885scrt1b9662.094ENSONIG00000003152-9662.094Oreochromis_niloticus
ENSXMAG00000027885scrt1b10096.429ENSONIG00000006007scrt1b10096.429Oreochromis_niloticus
ENSXMAG00000027885scrt1b9973.754ENSORLG00000022825-9973.754Oryzias_latipes
ENSXMAG00000027885scrt1b10096.429ENSORLG00000025651scrt1b10096.429Oryzias_latipes
ENSXMAG00000027885scrt1b9664.725ENSORLG00000024051scrt29764.725Oryzias_latipes
ENSXMAG00000027885scrt1b9664.725ENSORLG00020011478scrt29764.725Oryzias_latipes_hni
ENSXMAG00000027885scrt1b10096.429ENSORLG00020012967scrt1b10096.429Oryzias_latipes_hni
ENSXMAG00000027885scrt1b9975.083ENSORLG00015010104-9975.083Oryzias_latipes_hsok
ENSXMAG00000027885scrt1b9664.725ENSORLG00015005524scrt29764.725Oryzias_latipes_hsok
ENSXMAG00000027885scrt1b10096.429ENSORLG00015019165scrt1b10096.429Oryzias_latipes_hsok
ENSXMAG00000027885scrt1b10096.429ENSOMEG00000003925scrt1b10096.429Oryzias_melastigma
ENSXMAG00000027885scrt1b9975.585ENSOMEG00000000286-9975.585Oryzias_melastigma
ENSXMAG00000027885scrt1b9665.049ENSOMEG00000002661scrt29765.049Oryzias_melastigma
ENSXMAG00000027885scrt1b10086.429ENSPKIG00000022303SCRT110086.429Paramormyrops_kingsleyae
ENSXMAG00000027885scrt1b10085.053ENSPKIG00000020085scrt1a10085.053Paramormyrops_kingsleyae
ENSXMAG00000027885scrt1b10091.429ENSPMGG00000002260scrt1b10091.429Periophthalmus_magnuspinnatus
ENSXMAG00000027885scrt1b9670.758ENSPMGG00000016561scrt29670.758Periophthalmus_magnuspinnatus
ENSXMAG00000027885scrt1b9974.237ENSPMGG00000021402-9974.237Periophthalmus_magnuspinnatus
ENSXMAG00000027885scrt1b9976.768ENSPFOG00000005616-9976.768Poecilia_formosa
ENSXMAG00000027885scrt1b10099.643ENSPFOG00000017719scrt1b10099.643Poecilia_formosa
ENSXMAG00000027885scrt1b9665.049ENSPFOG00000007738scrt29765.049Poecilia_formosa
ENSXMAG00000027885scrt1b9976.768ENSPLAG00000011718-9976.768Poecilia_latipinna
ENSXMAG00000027885scrt1b10099.643ENSPLAG00000009876scrt1b10099.643Poecilia_latipinna
ENSXMAG00000027885scrt1b9671.841ENSPLAG00000005765scrt29671.841Poecilia_latipinna
ENSXMAG00000027885scrt1b9671.841ENSPMEG00000001538scrt29671.841Poecilia_mexicana
ENSXMAG00000027885scrt1b9976.768ENSPMEG00000011706-9976.768Poecilia_mexicana
ENSXMAG00000027885scrt1b10099.643ENSPMEG00000013274scrt1b10099.643Poecilia_mexicana
ENSXMAG00000027885scrt1b9665.049ENSPREG00000001147scrt29765.049Poecilia_reticulata
ENSXMAG00000027885scrt1b9976.094ENSPREG00000012166-9976.094Poecilia_reticulata
ENSXMAG00000027885scrt1b10099.643ENSPREG00000018985scrt1b10099.643Poecilia_reticulata
ENSXMAG00000027885scrt1b10096.429ENSPNYG00000017733scrt1b10096.429Pundamilia_nyererei
ENSXMAG00000027885scrt1b9975.333ENSPNYG00000008865-9975.333Pundamilia_nyererei
ENSXMAG00000027885scrt1b9670.290ENSPNYG00000013109scrt29670.290Pundamilia_nyererei
ENSXMAG00000027885scrt1b9884.116ENSPNAG00000027880-9984.116Pygocentrus_nattereri
ENSXMAG00000027885scrt1b10085.053ENSPNAG00000017415scrt1a10085.053Pygocentrus_nattereri
ENSXMAG00000027885scrt1b10085.765ENSSFOG00015001195SCRT110085.765Scleropages_formosus
ENSXMAG00000027885scrt1b9973.510ENSSMAG00000005122-9973.510Scophthalmus_maximus
ENSXMAG00000027885scrt1b9996.057ENSSMAG00000019207scrt1b9996.057Scophthalmus_maximus
ENSXMAG00000027885scrt1b9977.333ENSSDUG00000013215-9977.333Seriola_dumerili
ENSXMAG00000027885scrt1b10097.500ENSSDUG00000007752scrt1b10097.500Seriola_dumerili
ENSXMAG00000027885scrt1b9865.772ENSSDUG00000001637scrt29666.443Seriola_dumerili
ENSXMAG00000027885scrt1b10097.500ENSSLDG00000017166scrt1b10097.500Seriola_lalandi_dorsalis
ENSXMAG00000027885scrt1b9664.401ENSSLDG00000013565scrt29765.049Seriola_lalandi_dorsalis
ENSXMAG00000027885scrt1b9977.333ENSSLDG00000016454-9977.333Seriola_lalandi_dorsalis
ENSXMAG00000027885scrt1b9666.052ENSSPUG00000018637SCRT29766.052Sphenodon_punctatus
ENSXMAG00000027885scrt1b9975.333ENSSPAG00000006788-9977.000Stegastes_partitus
ENSXMAG00000027885scrt1b9670.652ENSSPAG00000014018scrt29670.652Stegastes_partitus
ENSXMAG00000027885scrt1b10097.500ENSSPAG00000002200scrt1b10097.500Stegastes_partitus
ENSXMAG00000027885scrt1b8271.739ENSTGUG00000006801SCRT29971.739Taeniopygia_guttata
ENSXMAG00000027885scrt1b8677.500ENSTRUG00000019558-8177.500Takifugu_rubripes
ENSXMAG00000027885scrt1b9975.168ENSTRUG00000012719-9975.168Takifugu_rubripes
ENSXMAG00000027885scrt1b9894.545ENSTRUG00000011637scrt1b9994.545Takifugu_rubripes
ENSXMAG00000027885scrt1b9667.354ENSTRUG00000007620scrt29667.354Takifugu_rubripes
ENSXMAG00000027885scrt1b9670.609ENSTNIG00000012473scrt29770.609Tetraodon_nigroviridis
ENSXMAG00000027885scrt1b10094.643ENSTNIG00000018384scrt1b10094.643Tetraodon_nigroviridis
ENSXMAG00000027885scrt1b100100.000ENSXCOG00000019675scrt1b100100.000Xiphophorus_couchianus
ENSXMAG00000027885scrt1b9668.581ENSXCOG00000014367scrt29668.581Xiphophorus_couchianus
ENSXMAG00000027885scrt1b9976.241ENSXCOG00000019861-9976.241Xiphophorus_couchianus
ENSXMAG00000027885scrt1b9976.094ENSXMAG00000015353-9976.094Xiphophorus_maculatus
ENSXMAG00000027885scrt1b9665.372ENSXMAG00000028567scrt29765.372Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us