EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000028016 (Gene tree)
Gene ID: 111609847
Gene Symbol: pus3 (1 of many)
Alias: fj78b12|wu:fj78b12|zgc:56653
Full Name: tRNA pseudouridine(38/39) synthase-like
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Minus strand
Length: 8938 bases
Position: chr10:9223582-9232519
Accession: 111609847
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000024039	PseudoU_synth_1	PF01416.20	6.3e-30	1	1
ENSXMAP00000038256	PseudoU_synth_1	PF01416.20	2.8e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000030622	-	1353	-	ENSXMAP00000024039	450 (aa)	-	-
ENSXMAT00000041972	-	1383	XM_023340574	ENSXMAP00000038256	460 (aa)	XP_023196342	-

Gene Model

Click here to download ENSXMAG00000028016's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000028016's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000028016	pus3	95	51.106	ENSG00000110060	PUS3	92	53.750	Homo_sapiens
ENSXMAG00000028016	pus3	100	80.171	ENSAPOG00000019483	pus3	100	82.380	Acanthochromis_polyacanthus
ENSXMAG00000028016	pus3	95	49.889	ENSAMEG00000000144	PUS3	92	49.889	Ailuropoda_melanoleuca
ENSXMAG00000028016	pus3	80	87.500	ENSACIG00000024479	pus3	100	87.500	Amphilophus_citrinellus
ENSXMAG00000028016	pus3	100	78.678	ENSAOCG00000006589	pus3	98	78.038	Amphiprion_ocellaris
ENSXMAG00000028016	pus3	100	77.682	ENSAPEG00000014617	pus3	98	77.682	Amphiprion_percula
ENSXMAG00000028016	pus3	100	77.991	ENSATEG00000022731	pus3	95	81.859	Anabas_testudineus
ENSXMAG00000028016	pus3	90	53.256	ENSAPLG00000013285	PUS3	97	53.256	Anas_platyrhynchos
ENSXMAG00000028016	pus3	90	51.142	ENSACAG00000000186	PUS3	93	51.142	Anolis_carolinensis
ENSXMAG00000028016	pus3	95	50.442	ENSANAG00000035614	PUS3	92	50.442	Aotus_nancymaae
ENSXMAG00000028016	pus3	99	79.957	ENSACLG00000007356	pus3	97	80.310	Astatotilapia_calliptera
ENSXMAG00000028016	pus3	96	68.874	ENSAMXG00000019534	pus3	94	68.889	Astyanax_mexicanus
ENSXMAG00000028016	pus3	95	49.889	ENSBTAG00000014339	PUS3	91	49.889	Bos_taurus
ENSXMAG00000028016	pus3	79	37.366	WBGene00006473	tag-124	95	36.616	Caenorhabditis_elegans
ENSXMAG00000028016	pus3	95	50.885	ENSCJAG00000046645	PUS3	92	50.885	Callithrix_jacchus
ENSXMAG00000028016	pus3	95	49.446	ENSCAFG00000010534	PUS3	92	49.446	Canis_familiaris
ENSXMAG00000028016	pus3	95	49.446	ENSCAFG00020010659	PUS3	92	49.446	Canis_lupus_dingo
ENSXMAG00000028016	pus3	95	49.889	ENSCHIG00000012260	PUS3	92	49.127	Capra_hircus
ENSXMAG00000028016	pus3	90	52.681	ENSTSYG00000014744	PUS3	88	52.681	Carlito_syrichta
ENSXMAG00000028016	pus3	95	50.998	ENSCAPG00000012231	PUS3	92	50.998	Cavia_aperea
ENSXMAG00000028016	pus3	95	50.998	ENSCPOG00000032587	PUS3	92	50.998	Cavia_porcellus
ENSXMAG00000028016	pus3	96	49.787	ENSCCAG00000035999	PUS3	96	49.787	Cebus_capucinus
ENSXMAG00000028016	pus3	95	50.885	ENSCATG00000043123	PUS3	92	50.885	Cercocebus_atys
ENSXMAG00000028016	pus3	95	51.549	ENSCLAG00000014947	PUS3	92	51.549	Chinchilla_lanigera
ENSXMAG00000028016	pus3	95	51.327	ENSCSAG00000002281	PUS3	92	51.327	Chlorocebus_sabaeus
ENSXMAG00000028016	pus3	80	53.297	ENSCHOG00000008442	PUS3	94	53.297	Choloepus_hoffmanni
ENSXMAG00000028016	pus3	52	46.816	ENSCPBG00000011173	PUS3	93	46.816	Chrysemys_picta_bellii
ENSXMAG00000028016	pus3	72	36.240	ENSCING00000009062	-	66	37.101	Ciona_intestinalis
ENSXMAG00000028016	pus3	82	35.572	ENSCSAVG00000002211	-	90	35.572	Ciona_savignyi
ENSXMAG00000028016	pus3	95	50.667	ENSCANG00000038729	PUS3	92	50.667	Colobus_angolensis_palliatus
ENSXMAG00000028016	pus3	98	48.529	ENSCGRG00001019842	Pus3	92	50.557	Cricetulus_griseus_chok1gshd
ENSXMAG00000028016	pus3	98	48.109	ENSCGRG00000010155	Pus3	92	50.111	Cricetulus_griseus_crigri
ENSXMAG00000028016	pus3	100	71.550	ENSCSEG00000007948	pus3	95	75.116	Cynoglossus_semilaevis
ENSXMAG00000028016	pus3	100	84.335	ENSCVAG00000022150	pus3	98	83.906	Cyprinodon_variegatus
ENSXMAG00000028016	pus3	98	70.824	ENSDARG00000028976	pus3	97	70.824	Danio_rerio
ENSXMAG00000028016	pus3	90	51.852	ENSDNOG00000040719	PUS3	89	51.852	Dasypus_novemcinctus
ENSXMAG00000028016	pus3	95	50.773	ENSDORG00000001819	Pus3	92	50.773	Dipodomys_ordii
ENSXMAG00000028016	pus3	83	41.943	FBgn0034703	CG3045	82	41.943	Drosophila_melanogaster
ENSXMAG00000028016	pus3	90	46.729	ENSETEG00000013067	PUS3	88	46.729	Echinops_telfairi
ENSXMAG00000028016	pus3	91	50.794	ENSEBUG00000002154	pus3	67	50.794	Eptatretus_burgeri
ENSXMAG00000028016	pus3	95	48.894	ENSEASG00005023003	PUS3	92	48.894	Equus_asinus_asinus
ENSXMAG00000028016	pus3	95	49.336	ENSECAG00000007581	PUS3	92	49.336	Equus_caballus
ENSXMAG00000028016	pus3	95	50.667	ENSEEUG00000010543	PUS3	92	50.667	Erinaceus_europaeus
ENSXMAG00000028016	pus3	95	74.142	ENSELUG00000004425	pus3	96	74.142	Esox_lucius
ENSXMAG00000028016	pus3	95	50.334	ENSFCAG00000005340	PUS3	91	50.334	Felis_catus
ENSXMAG00000028016	pus3	91	52.822	ENSFALG00000005159	PUS3	90	52.822	Ficedula_albicollis
ENSXMAG00000028016	pus3	95	50.889	ENSFDAG00000020745	PUS3	91	50.889	Fukomys_damarensis
ENSXMAG00000028016	pus3	100	86.910	ENSFHEG00000010984	pus3	91	86.910	Fundulus_heteroclitus
ENSXMAG00000028016	pus3	96	70.091	ENSGMOG00000004534	pus3	100	70.091	Gadus_morhua
ENSXMAG00000028016	pus3	97	49.266	ENSGALG00000000962	PUS3	94	53.303	Gallus_gallus
ENSXMAG00000028016	pus3	100	93.966	ENSGAFG00000005615	pus3	98	93.966	Gambusia_affinis
ENSXMAG00000028016	pus3	95	78.621	ENSGACG00000002125	pus3	94	78.621	Gasterosteus_aculeatus
ENSXMAG00000028016	pus3	99	50.103	ENSGAGG00000000160	PUS3	93	52.165	Gopherus_agassizii
ENSXMAG00000028016	pus3	95	50.000	ENSGGOG00000015047	PUS3	92	50.000	Gorilla_gorilla
ENSXMAG00000028016	pus3	99	79.744	ENSHBUG00000016532	pus3	97	80.088	Haplochromis_burtoni
ENSXMAG00000028016	pus3	52	40.000	ENSHGLG00000016285	-	94	39.592	Heterocephalus_glaber_female
ENSXMAG00000028016	pus3	96	45.598	ENSHGLG00000018861	-	96	45.598	Heterocephalus_glaber_female
ENSXMAG00000028016	pus3	95	49.778	ENSHGLG00000000565	PUS3	91	49.778	Heterocephalus_glaber_female
ENSXMAG00000028016	pus3	87	46.172	ENSHGLG00000006599	-	80	47.264	Heterocephalus_glaber_female
ENSXMAG00000028016	pus3	61	57.875	ENSHGLG00000015753	-	75	57.875	Heterocephalus_glaber_female
ENSXMAG00000028016	pus3	62	52.128	ENSHGLG00100002435	-	95	52.128	Heterocephalus_glaber_male
ENSXMAG00000028016	pus3	90	48.837	ENSHGLG00100014825	-	89	48.951	Heterocephalus_glaber_male
ENSXMAG00000028016	pus3	70	50.157	ENSHGLG00100007519	-	72	50.157	Heterocephalus_glaber_male
ENSXMAG00000028016	pus3	84	47.028	ENSHGLG00100011339	-	90	46.649	Heterocephalus_glaber_male
ENSXMAG00000028016	pus3	67	54.754	ENSHGLG00100008656	-	95	54.754	Heterocephalus_glaber_male
ENSXMAG00000028016	pus3	95	75.744	ENSHCOG00000015705	pus3	97	75.744	Hippocampus_comes
ENSXMAG00000028016	pus3	95	70.946	ENSIPUG00000000105	pus3	94	72.297	Ictalurus_punctatus
ENSXMAG00000028016	pus3	95	50.000	ENSSTOG00000003721	PUS3	92	50.000	Ictidomys_tridecemlineatus
ENSXMAG00000028016	pus3	85	52.709	ENSJJAG00000011306	Pus3	89	51.869	Jaculus_jaculus
ENSXMAG00000028016	pus3	99	79.406	ENSKMAG00000016715	pus3	98	79.531	Kryptolebias_marmoratus
ENSXMAG00000028016	pus3	94	77.882	ENSLBEG00000004143	pus3	96	78.190	Labrus_bergylta
ENSXMAG00000028016	pus3	99	48.225	ENSLACG00000011161	PUS3	92	50.000	Latimeria_chalumnae
ENSXMAG00000028016	pus3	95	68.849	ENSLOCG00000011922	pus3	98	68.849	Lepisosteus_oculatus
ENSXMAG00000028016	pus3	95	49.666	ENSLAFG00000000535	PUS3	92	49.666	Loxodonta_africana
ENSXMAG00000028016	pus3	95	51.106	ENSMFAG00000041002	PUS3	92	51.106	Macaca_fascicularis
ENSXMAG00000028016	pus3	95	51.106	ENSMMUG00000041875	PUS3	92	51.106	Macaca_mulatta
ENSXMAG00000028016	pus3	95	51.106	ENSMNEG00000045347	PUS3	92	51.106	Macaca_nemestrina
ENSXMAG00000028016	pus3	95	50.885	ENSMLEG00000029053	PUS3	92	50.885	Mandrillus_leucophaeus
ENSXMAG00000028016	pus3	99	76.129	ENSMAMG00000016741	pus3	98	76.989	Mastacembelus_armatus
ENSXMAG00000028016	pus3	99	79.744	ENSMZEG00005015950	pus3	97	80.088	Maylandia_zebra
ENSXMAG00000028016	pus3	80	56.749	ENSMGAG00000000851	PUS3	93	56.749	Meleagris_gallopavo
ENSXMAG00000028016	pus3	98	48.536	ENSMAUG00000015873	Pus3	92	50.111	Mesocricetus_auratus
ENSXMAG00000028016	pus3	90	50.701	ENSMICG00000032941	PUS3	88	50.701	Microcebus_murinus
ENSXMAG00000028016	pus3	98	49.266	ENSMOCG00000004901	Pus3	95	49.786	Microtus_ochrogaster
ENSXMAG00000028016	pus3	100	76.017	ENSMMOG00000013909	pus3	94	80.653	Mola_mola
ENSXMAG00000028016	pus3	91	50.572	ENSMODG00000004222	PUS3	96	50.572	Monodelphis_domestica
ENSXMAG00000028016	pus3	95	80.549	ENSMALG00000022420	pus3	95	80.549	Monopterus_albus
ENSXMAG00000028016	pus3	97	49.567	MGP_CAROLIEiJ_G0031957	Pus3	96	57.329	Mus_caroli
ENSXMAG00000028016	pus3	90	51.628	ENSMUSG00000032103	Pus3	96	57.329	Mus_musculus
ENSXMAG00000028016	pus3	94	48.696	MGP_PahariEiJ_G0014822	Pus3	96	57.655	Mus_pahari
ENSXMAG00000028016	pus3	90	52.093	MGP_SPRETEiJ_G0033081	Pus3	96	57.980	Mus_spretus
ENSXMAG00000028016	pus3	95	50.557	ENSMPUG00000006568	PUS3	92	50.557	Mustela_putorius_furo
ENSXMAG00000028016	pus3	96	50.110	ENSMLUG00000030636	PUS3	92	50.110	Myotis_lucifugus
ENSXMAG00000028016	pus3	99	48.857	ENSNGAG00000013868	Pus3	89	52.336	Nannospalax_galili
ENSXMAG00000028016	pus3	100	79.487	ENSNBRG00000015864	pus3	99	79.130	Neolamprologus_brichardi
ENSXMAG00000028016	pus3	95	51.327	ENSNLEG00000007460	PUS3	92	51.327	Nomascus_leucogenys
ENSXMAG00000028016	pus3	75	59.459	ENSMEUG00000014040	PUS3	71	59.459	Notamacropus_eugenii
ENSXMAG00000028016	pus3	95	50.444	ENSOPRG00000007888	-	92	50.444	Ochotona_princeps
ENSXMAG00000028016	pus3	95	50.885	ENSODEG00000004280	PUS3	92	50.885	Octodon_degus
ENSXMAG00000028016	pus3	95	83.028	ENSONIG00000016224	pus3	98	83.028	Oreochromis_niloticus
ENSXMAG00000028016	pus3	92	52.074	ENSOANG00000000406	PUS3	89	52.074	Ornithorhynchus_anatinus
ENSXMAG00000028016	pus3	90	50.935	ENSOCUG00000004468	PUS3	83	50.935	Oryctolagus_cuniculus
ENSXMAG00000028016	pus3	100	77.302	ENSORLG00000008445	pus3	98	77.302	Oryzias_latipes
ENSXMAG00000028016	pus3	100	77.302	ENSORLG00020008847	pus3	98	77.302	Oryzias_latipes_hni
ENSXMAG00000028016	pus3	100	77.253	ENSORLG00015007438	pus3	98	77.253	Oryzias_latipes_hsok
ENSXMAG00000028016	pus3	100	76.445	ENSOMEG00000014321	pus3	98	78.319	Oryzias_melastigma
ENSXMAG00000028016	pus3	90	51.869	ENSOGAG00000008913	PUS3	88	51.869	Otolemur_garnettii
ENSXMAG00000028016	pus3	95	49.889	ENSOARG00000011870	PUS3	91	49.889	Ovis_aries
ENSXMAG00000028016	pus3	95	50.885	ENSPPAG00000025809	PUS3	92	50.885	Pan_paniscus
ENSXMAG00000028016	pus3	95	50.111	ENSPPRG00000005662	PUS3	91	50.111	Panthera_pardus
ENSXMAG00000028016	pus3	95	50.334	ENSPTIG00000001192	PUS3	91	50.334	Panthera_tigris_altaica
ENSXMAG00000028016	pus3	95	50.885	ENSPTRG00000004449	PUS3	92	50.885	Pan_troglodytes
ENSXMAG00000028016	pus3	95	50.885	ENSPANG00000013782	PUS3	92	50.885	Papio_anubis
ENSXMAG00000028016	pus3	98	67.544	ENSPKIG00000000646	pus3	98	67.544	Paramormyrops_kingsleyae
ENSXMAG00000028016	pus3	97	51.163	ENSPSIG00000013961	PUS3	92	52.183	Pelodiscus_sinensis
ENSXMAG00000028016	pus3	86	79.949	ENSPMGG00000000911	pus3	91	79.949	Periophthalmus_magnuspinnatus
ENSXMAG00000028016	pus3	98	48.326	ENSPEMG00000009602	Pus3	92	50.221	Peromyscus_maniculatus_bairdii
ENSXMAG00000028016	pus3	91	50.572	ENSPCIG00000010225	PUS3	95	50.572	Phascolarctos_cinereus
ENSXMAG00000028016	pus3	95	91.264	ENSPFOG00000009447	pus3	99	91.264	Poecilia_formosa
ENSXMAG00000028016	pus3	100	92.457	ENSPLAG00000023343	pus3	98	92.457	Poecilia_latipinna
ENSXMAG00000028016	pus3	100	93.319	ENSPMEG00000009870	pus3	98	93.319	Poecilia_mexicana
ENSXMAG00000028016	pus3	72	93.353	ENSPREG00000003179	pus3	64	93.353	Poecilia_reticulata
ENSXMAG00000028016	pus3	95	50.885	ENSPPYG00000004039	PUS3	92	50.885	Pongo_abelii
ENSXMAG00000028016	pus3	95	49.778	ENSPCAG00000000441	PUS3	92	49.778	Procavia_capensis
ENSXMAG00000028016	pus3	90	51.054	ENSPCOG00000019330	PUS3	88	51.054	Propithecus_coquereli
ENSXMAG00000028016	pus3	90	51.636	ENSPVAG00000002606	PUS3	88	51.636	Pteropus_vampyrus
ENSXMAG00000028016	pus3	99	79.872	ENSPNYG00000019615	pus3	97	80.531	Pundamilia_nyererei
ENSXMAG00000028016	pus3	96	70.222	ENSPNAG00000014541	pus3	93	70.222	Pygocentrus_nattereri
ENSXMAG00000028016	pus3	97	50.217	ENSRNOG00000012994	Pus3	94	50.217	Rattus_norvegicus
ENSXMAG00000028016	pus3	94	51.111	ENSRBIG00000044456	PUS3	91	51.111	Rhinopithecus_bieti
ENSXMAG00000028016	pus3	95	51.106	ENSRROG00000035245	PUS3	92	51.106	Rhinopithecus_roxellana
ENSXMAG00000028016	pus3	72	41.964	YFL001W	DEG1	71	41.964	Saccharomyces_cerevisiae
ENSXMAG00000028016	pus3	96	49.362	ENSSBOG00000022433	PUS3	95	49.362	Saimiri_boliviensis_boliviensis
ENSXMAG00000028016	pus3	96	47.752	ENSSHAG00000001382	PUS3	95	47.752	Sarcophilus_harrisii
ENSXMAG00000028016	pus3	97	72.540	ENSSFOG00015004850	pus3	98	72.540	Scleropages_formosus
ENSXMAG00000028016	pus3	99	74.895	ENSSMAG00000020340	pus3	98	75.957	Scophthalmus_maximus
ENSXMAG00000028016	pus3	100	77.919	ENSSDUG00000020825	pus3	98	77.660	Seriola_dumerili
ENSXMAG00000028016	pus3	100	78.344	ENSSLDG00000019932	pus3	95	80.132	Seriola_lalandi_dorsalis
ENSXMAG00000028016	pus3	67	56.066	ENSSARG00000013826	PUS3	96	56.066	Sorex_araneus
ENSXMAG00000028016	pus3	96	50.972	ENSSPUG00000001412	PUS3	93	50.972	Sphenodon_punctatus
ENSXMAG00000028016	pus3	96	82.258	ENSSPAG00000019221	pus3	98	82.258	Stegastes_partitus
ENSXMAG00000028016	pus3	95	50.111	ENSSSCG00000015222	PUS3	92	50.111	Sus_scrofa
ENSXMAG00000028016	pus3	90	53.241	ENSTGUG00000000778	-	97	53.241	Taeniopygia_guttata
ENSXMAG00000028016	pus3	95	75.000	ENSTRUG00000013050	pus3	99	74.888	Takifugu_rubripes
ENSXMAG00000028016	pus3	99	72.113	ENSTNIG00000004929	PUS3	95	75.982	Tetraodon_nigroviridis
ENSXMAG00000028016	pus3	84	73.500	ENSTNIG00000010307	pus3	97	73.500	Tetraodon_nigroviridis
ENSXMAG00000028016	pus3	90	52.093	ENSTBEG00000004382	PUS3	93	52.093	Tupaia_belangeri
ENSXMAG00000028016	pus3	95	50.444	ENSTTRG00000012167	PUS3	92	50.444	Tursiops_truncatus
ENSXMAG00000028016	pus3	95	49.443	ENSUAMG00000009297	PUS3	92	49.443	Ursus_americanus
ENSXMAG00000028016	pus3	95	49.666	ENSUMAG00000001795	PUS3	92	49.666	Ursus_maritimus
ENSXMAG00000028016	pus3	95	50.667	ENSVPAG00000001495	PUS3	91	50.667	Vicugna_pacos
ENSXMAG00000028016	pus3	95	49.667	ENSVVUG00000020152	PUS3	92	49.667	Vulpes_vulpes
ENSXMAG00000028016	pus3	96	50.766	ENSXETG00000024532	pus3	86	50.766	Xenopus_tropicalis
ENSXMAG00000028016	pus3	71	96.552	ENSXMAG00000025659	PUS3	55	95.077	Xiphophorus_maculatus
ENSXMAG00000028016	pus3	57	96.875	ENSXMAG00000025146	pus3	79	96.875	Xiphophorus_maculatus
ENSXMAG00000028016	pus3	57	96.875	ENSXMAG00000028945	pus3	85	96.875	Xiphophorus_maculatus
ENSXMAG00000028016	pus3	71	96.562	ENSXMAG00000029934	pus3	74	96.562	Xiphophorus_maculatus
ENSXMAG00000028016	pus3	71	96.865	ENSXMAG00000025077	pus3	74	96.865	Xiphophorus_maculatus