EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000028309 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 3732 bases
Position: chr23:30617532-30621263
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000038114	RVT_1	PF00078.27	4.5e-46	1	1
ENSXMAP00000038114	RNase_H	PF00075.24	5e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000029667	-	3732	-	ENSXMAP00000038114	1243 (aa)	-	-

Gene Model

Click here to download ENSXMAG00000028309's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000028309's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000028309	-	100	45.939	ENSAMXG00000043500	-	96	46.789	Astyanax_mexicanus
ENSXMAG00000028309	-	99	47.284	ENSDARG00000099201	BX908731.1	99	46.877	Danio_rerio
ENSXMAG00000028309	-	99	47.364	ENSDARG00000103037	CR848788.1	99	47.036	Danio_rerio
ENSXMAG00000028309	-	100	48.485	ENSDARG00000103436	BX548028.1	99	48.485	Danio_rerio
ENSXMAG00000028309	-	100	76.064	ENSKMAG00000004415	-	100	76.466	Kryptolebias_marmoratus
ENSXMAG00000028309	-	68	53.081	ENSKMAG00000012711	-	99	53.230	Kryptolebias_marmoratus
ENSXMAG00000028309	-	65	83.458	ENSKMAG00000021014	-	99	83.458	Kryptolebias_marmoratus
ENSXMAG00000028309	-	100	76.064	ENSKMAG00000003982	-	100	76.466	Kryptolebias_marmoratus
ENSXMAG00000028309	-	100	46.820	ENSORLG00000024423	-	99	46.820	Oryzias_latipes
ENSXMAG00000028309	-	100	46.858	ENSORLG00000026314	-	99	46.858	Oryzias_latipes
ENSXMAG00000028309	-	100	46.858	ENSORLG00000023592	-	99	46.858	Oryzias_latipes
ENSXMAG00000028309	-	100	46.778	ENSORLG00000027174	-	99	46.778	Oryzias_latipes
ENSXMAG00000028309	-	100	47.180	ENSORLG00020011427	-	99	47.180	Oryzias_latipes_hni
ENSXMAG00000028309	-	100	47.498	ENSORLG00020020238	-	99	47.498	Oryzias_latipes_hni
ENSXMAG00000028309	-	71	46.830	ENSORLG00020019901	-	99	46.763	Oryzias_latipes_hni
ENSXMAG00000028309	-	100	47.339	ENSORLG00020018543	-	99	47.339	Oryzias_latipes_hni
ENSXMAG00000028309	-	88	48.044	ENSORLG00015013792	-	99	48.044	Oryzias_latipes_hsok
ENSXMAG00000028309	-	85	47.280	ENSOMEG00000003836	-	98	47.280	Oryzias_melastigma
ENSXMAG00000028309	-	97	48.807	ENSPKIG00000019189	-	95	49.042	Paramormyrops_kingsleyae
ENSXMAG00000028309	-	92	44.349	ENSXMAG00000029466	-	100	43.869	Xiphophorus_maculatus
ENSXMAG00000028309	-	100	99.437	ENSXMAG00000021070	-	100	99.437	Xiphophorus_maculatus
ENSXMAG00000028309	-	69	52.364	ENSXMAG00000020874	-	95	52.364	Xiphophorus_maculatus
ENSXMAG00000028309	-	71	45.628	ENSXMAG00000024143	-	94	46.373	Xiphophorus_maculatus
ENSXMAG00000028309	-	100	56.170	ENSXMAG00000021061	-	100	56.170	Xiphophorus_maculatus
ENSXMAG00000028309	-	81	50.442	ENSXMAG00000027130	-	99	50.442	Xiphophorus_maculatus
ENSXMAG00000028309	-	90	48.004	ENSXMAG00000026248	-	95	48.887	Xiphophorus_maculatus
ENSXMAG00000028309	-	100	99.437	ENSXMAG00000021755	-	100	99.437	Xiphophorus_maculatus
ENSXMAG00000028309	-	90	48.004	ENSXMAG00000022223	-	95	48.887	Xiphophorus_maculatus
ENSXMAG00000028309	-	63	58.577	ENSXMAG00000023377	-	100	58.344	Xiphophorus_maculatus
ENSXMAG00000028309	-	64	57.357	ENSXMAG00000023126	-	99	57.071	Xiphophorus_maculatus
ENSXMAG00000028309	-	61	44.342	ENSXMAG00000025430	-	99	44.518	Xiphophorus_maculatus
ENSXMAG00000028309	-	81	49.951	ENSXMAG00000029923	-	99	49.951	Xiphophorus_maculatus
ENSXMAG00000028309	-	81	50.098	ENSXMAG00000023078	-	99	50.098	Xiphophorus_maculatus
ENSXMAG00000028309	-	90	48.004	ENSXMAG00000026588	-	95	48.887	Xiphophorus_maculatus