EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000028338 (Gene tree)
Gene ID: -
Gene Symbol: arl1
Alias: zgc:92883
Full Name: ADP ribosylation factor like GTPase 1
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Minus strand
Length: 6521 bases
Position: chr17:15435170-15441690
Accession: 102228778
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000034009	MMR_HSR1	PF01926.23	1.1e-05	1	1
ENSXMAP00000027227	MMR_HSR1	PF01926.23	2.2e-05	1	1
ENSXMAP00000039389	MMR_HSR1	PF01926.23	0.00012	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000021567	-	531	XM_005816689	ENSXMAP00000039389	176 (aa)	XP_005816746	-
ENSXMAT00000026999	-	558	-	ENSXMAP00000027227	185 (aa)	-	-
ENSXMAT00000039878	-	420	-	ENSXMAP00000034009	139 (aa)	-	-

Gene Model

Click here to download ENSXMAG00000028338's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000028338's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000028338	arl1	91	94.488	ENSG00000120805	ARL1	100	92.073	Homo_sapiens
ENSXMAG00000028338	arl1	100	96.648	ENSAPOG00000002469	arl1	99	96.648	Acanthochromis_polyacanthus
ENSXMAG00000028338	arl1	91	95.276	ENSAMEG00000016452	ARL1	99	91.620	Ailuropoda_melanoleuca
ENSXMAG00000028338	arl1	100	98.864	ENSACIG00000007953	arl1	100	98.864	Amphilophus_citrinellus
ENSXMAG00000028338	arl1	100	96.648	ENSAOCG00000013008	arl1	99	96.648	Amphiprion_ocellaris
ENSXMAG00000028338	arl1	100	96.648	ENSAPEG00000013187	arl1	99	96.648	Amphiprion_percula
ENSXMAG00000028338	arl1	100	97.207	ENSATEG00000005559	arl1	96	97.207	Anabas_testudineus
ENSXMAG00000028338	arl1	100	93.296	ENSAPLG00000016092	ARL1	99	93.296	Anas_platyrhynchos
ENSXMAG00000028338	arl1	100	93.296	ENSACAG00000011602	ARL1	99	93.296	Anolis_carolinensis
ENSXMAG00000028338	arl1	91	95.276	ENSANAG00000023491	ARL1	99	92.179	Aotus_nancymaae
ENSXMAG00000028338	arl1	100	97.765	ENSACLG00000008188	arl1	99	97.765	Astatotilapia_calliptera
ENSXMAG00000028338	arl1	100	96.089	ENSAMXG00000021056	arl1	99	96.089	Astyanax_mexicanus
ENSXMAG00000028338	arl1	91	95.276	ENSBTAG00000011883	ARL1	99	92.179	Bos_taurus
ENSXMAG00000028338	arl1	94	80.916	WBGene00000187	arl-1	95	76.608	Caenorhabditis_elegans
ENSXMAG00000028338	arl1	91	95.276	ENSCJAG00000001966	ARL1	99	92.179	Callithrix_jacchus
ENSXMAG00000028338	arl1	91	95.276	ENSCAFG00000006992	ARL1	99	92.179	Canis_familiaris
ENSXMAG00000028338	arl1	91	95.276	ENSCAFG00020024333	ARL1	99	92.179	Canis_lupus_dingo
ENSXMAG00000028338	arl1	94	95.385	ENSCHIG00000024524	ARL1	100	92.941	Capra_hircus
ENSXMAG00000028338	arl1	92	95.312	ENSTSYG00000013257	-	100	92.179	Carlito_syrichta
ENSXMAG00000028338	arl1	89	95.161	ENSCAPG00000001010	ARL1	100	94.928	Cavia_aperea
ENSXMAG00000028338	arl1	91	95.276	ENSCPOG00000026014	ARL1	99	92.179	Cavia_porcellus
ENSXMAG00000028338	arl1	91	95.276	ENSCCAG00000025938	ARL1	99	92.179	Cebus_capucinus
ENSXMAG00000028338	arl1	93	92.814	ENSCLAG00000008180	ARL1	99	92.179	Chinchilla_lanigera
ENSXMAG00000028338	arl1	91	94.488	ENSCSAG00000003368	ARL1	99	91.620	Chlorocebus_sabaeus
ENSXMAG00000028338	arl1	100	92.179	ENSCPBG00000004906	ARL1	99	92.179	Chrysemys_picta_bellii
ENSXMAG00000028338	arl1	92	44.961	ENSCING00000004577	-	95	43.636	Ciona_intestinalis
ENSXMAG00000028338	arl1	96	83.582	ENSCING00000019794	-	99	78.090	Ciona_intestinalis
ENSXMAG00000028338	arl1	96	85.714	ENSCSAVG00000007620	-	97	78.652	Ciona_savignyi
ENSXMAG00000028338	arl1	91	93.701	ENSCANG00000033548	ARL1	99	91.061	Colobus_angolensis_palliatus
ENSXMAG00000028338	arl1	93	93.413	ENSCGRG00001010446	Arl1	99	92.737	Cricetulus_griseus_chok1gshd
ENSXMAG00000028338	arl1	91	95.276	ENSCGRG00000009856	Arl1	89	92.179	Cricetulus_griseus_crigri
ENSXMAG00000028338	arl1	100	97.765	ENSCVAG00000001731	arl1	99	97.765	Cyprinodon_variegatus
ENSXMAG00000028338	arl1	100	96.648	ENSDARG00000101680	arl1	99	98.225	Danio_rerio
ENSXMAG00000028338	arl1	91	95.276	ENSDORG00000014770	Arl1	94	92.179	Dipodomys_ordii
ENSXMAG00000028338	arl1	96	84.962	FBgn0000115	Arl1	95	81.871	Drosophila_melanogaster
ENSXMAG00000028338	arl1	96	92.537	ENSETEG00000020310	ARL1	100	89.326	Echinops_telfairi
ENSXMAG00000028338	arl1	91	95.276	ENSEASG00005020057	ARL1	99	92.179	Equus_asinus_asinus
ENSXMAG00000028338	arl1	94	95.385	ENSECAG00000000372	ARL1	99	92.179	Equus_caballus
ENSXMAG00000028338	arl1	100	94.413	ENSELUG00000001287	-	99	94.413	Esox_lucius
ENSXMAG00000028338	arl1	100	95.531	ENSELUG00000018440	arl1	99	95.531	Esox_lucius
ENSXMAG00000028338	arl1	91	95.276	ENSFCAG00000030871	ARL1	99	92.179	Felis_catus
ENSXMAG00000028338	arl1	100	93.296	ENSFALG00000011156	ARL1	99	93.296	Ficedula_albicollis
ENSXMAG00000028338	arl1	93	92.814	ENSFDAG00000016393	ARL1	99	92.179	Fukomys_damarensis
ENSXMAG00000028338	arl1	100	98.324	ENSFHEG00000004171	arl1	95	98.324	Fundulus_heteroclitus
ENSXMAG00000028338	arl1	100	95.531	ENSGMOG00000006859	arl1	99	95.531	Gadus_morhua
ENSXMAG00000028338	arl1	100	93.296	ENSGALG00000011651	ARL1	99	93.296	Gallus_gallus
ENSXMAG00000028338	arl1	97	99.259	ENSGAFG00000006973	arl1	99	99.398	Gambusia_affinis
ENSXMAG00000028338	arl1	96	98.507	ENSGACG00000019098	arl1	99	94.413	Gasterosteus_aculeatus
ENSXMAG00000028338	arl1	91	94.488	ENSGGOG00000010788	ARL1	99	91.620	Gorilla_gorilla
ENSXMAG00000028338	arl1	100	97.765	ENSHBUG00000010636	arl1	99	97.765	Haplochromis_burtoni
ENSXMAG00000028338	arl1	93	93.413	ENSHGLG00000004909	ARL1	99	92.737	Heterocephalus_glaber_female
ENSXMAG00000028338	arl1	93	93.413	ENSHGLG00100001832	ARL1	99	92.737	Heterocephalus_glaber_male
ENSXMAG00000028338	arl1	100	96.089	ENSHCOG00000005566	arl1	99	96.089	Hippocampus_comes
ENSXMAG00000028338	arl1	100	95.531	ENSIPUG00000013834	arl1	96	95.531	Ictalurus_punctatus
ENSXMAG00000028338	arl1	91	95.276	ENSSTOG00000016022	ARL1	99	92.179	Ictidomys_tridecemlineatus
ENSXMAG00000028338	arl1	93	84.431	ENSJJAG00000000452	-	99	84.358	Jaculus_jaculus
ENSXMAG00000028338	arl1	89	99.194	ENSKMAG00000005931	arl1	89	94.512	Kryptolebias_marmoratus
ENSXMAG00000028338	arl1	97	99.259	ENSLBEG00000000991	arl1	99	95.402	Labrus_bergylta
ENSXMAG00000028338	arl1	91	95.276	ENSLAFG00000026143	ARL1	94	92.179	Loxodonta_africana
ENSXMAG00000028338	arl1	91	94.488	ENSMFAG00000035725	ARL1	99	91.620	Macaca_fascicularis
ENSXMAG00000028338	arl1	91	94.488	ENSMMUG00000031610	ARL1	99	91.620	Macaca_mulatta
ENSXMAG00000028338	arl1	91	94.488	ENSMNEG00000007067	ARL1	99	91.620	Macaca_nemestrina
ENSXMAG00000028338	arl1	89	94.355	ENSMLEG00000036143	ARL1	100	92.073	Mandrillus_leucophaeus
ENSXMAG00000028338	arl1	100	98.864	ENSMAMG00000001968	arl1	100	98.864	Mastacembelus_armatus
ENSXMAG00000028338	arl1	100	97.765	ENSMZEG00005018136	arl1	99	97.765	Maylandia_zebra
ENSXMAG00000028338	arl1	100	93.296	ENSMGAG00000011748	ARL1	99	93.296	Meleagris_gallopavo
ENSXMAG00000028338	arl1	93	93.413	ENSMAUG00000021923	Arl1	99	92.737	Mesocricetus_auratus
ENSXMAG00000028338	arl1	91	95.276	ENSMICG00000015801	ARL1	99	92.179	Microcebus_murinus
ENSXMAG00000028338	arl1	93	93.413	ENSMOCG00000005852	Arl1	99	92.737	Microtus_ochrogaster
ENSXMAG00000028338	arl1	96	96.269	ENSMMOG00000003353	arl1	65	95.758	Mola_mola
ENSXMAG00000028338	arl1	100	91.620	ENSMODG00000003056	ARL1	99	91.620	Monodelphis_domestica
ENSXMAG00000028338	arl1	100	98.305	ENSMALG00000003003	arl1	100	98.305	Monopterus_albus
ENSXMAG00000028338	arl1	93	93.413	MGP_CAROLIEiJ_G0015712	Arl1	99	92.737	Mus_caroli
ENSXMAG00000028338	arl1	93	93.413	ENSMUSG00000060904	Arl1	100	95.652	Mus_musculus
ENSXMAG00000028338	arl1	93	93.413	MGP_PahariEiJ_G0031373	Arl1	99	92.737	Mus_pahari
ENSXMAG00000028338	arl1	93	93.413	MGP_SPRETEiJ_G0016530	Arl1	99	92.737	Mus_spretus
ENSXMAG00000028338	arl1	91	95.276	ENSMPUG00000011822	ARL1	99	91.667	Mustela_putorius_furo
ENSXMAG00000028338	arl1	91	95.276	ENSMLUG00000002351	-	98	93.491	Myotis_lucifugus
ENSXMAG00000028338	arl1	93	89.222	ENSMLUG00000025321	-	99	88.827	Myotis_lucifugus
ENSXMAG00000028338	arl1	89	95.161	ENSNGAG00000007879	-	100	95.652	Nannospalax_galili
ENSXMAG00000028338	arl1	100	97.765	ENSNBRG00000019783	arl1	99	97.765	Neolamprologus_brichardi
ENSXMAG00000028338	arl1	89	94.355	ENSNLEG00000006223	ARL1	100	92.073	Nomascus_leucogenys
ENSXMAG00000028338	arl1	100	91.620	ENSMEUG00000015525	ARL1	94	91.620	Notamacropus_eugenii
ENSXMAG00000028338	arl1	93	93.413	ENSODEG00000010531	-	99	92.737	Octodon_degus
ENSXMAG00000028338	arl1	93	91.617	ENSODEG00000019880	-	99	91.061	Octodon_degus
ENSXMAG00000028338	arl1	93	93.413	ENSODEG00000019783	-	99	92.737	Octodon_degus
ENSXMAG00000028338	arl1	100	97.765	ENSONIG00000009921	arl1	99	97.765	Oreochromis_niloticus
ENSXMAG00000028338	arl1	91	95.276	ENSOCUG00000002217	ARL1	95	92.179	Oryctolagus_cuniculus
ENSXMAG00000028338	arl1	96	100.000	ENSORLG00000008909	arl1	98	100.000	Oryzias_latipes
ENSXMAG00000028338	arl1	100	97.765	ENSORLG00020005754	arl1	99	97.765	Oryzias_latipes_hni
ENSXMAG00000028338	arl1	100	97.765	ENSORLG00015002736	arl1	98	99.398	Oryzias_latipes_hsok
ENSXMAG00000028338	arl1	96	100.000	ENSOMEG00000023497	arl1	93	97.701	Oryzias_melastigma
ENSXMAG00000028338	arl1	91	95.276	ENSOGAG00000015144	ARL1	99	92.179	Otolemur_garnettii
ENSXMAG00000028338	arl1	91	95.276	ENSOARG00000015007	ARL1	99	92.179	Ovis_aries
ENSXMAG00000028338	arl1	91	94.488	ENSPPAG00000034860	ARL1	99	91.620	Pan_paniscus
ENSXMAG00000028338	arl1	91	95.276	ENSPPRG00000023908	ARL1	99	92.179	Panthera_pardus
ENSXMAG00000028338	arl1	92	95.312	ENSPTIG00000002154	-	100	92.179	Panthera_tigris_altaica
ENSXMAG00000028338	arl1	91	94.488	ENSPTRG00000005350	ARL1	99	91.620	Pan_troglodytes
ENSXMAG00000028338	arl1	96	93.284	ENSPANG00000018816	ARL1	97	91.620	Papio_anubis
ENSXMAG00000028338	arl1	100	95.531	ENSPKIG00000007118	arl1	100	95.732	Paramormyrops_kingsleyae
ENSXMAG00000028338	arl1	100	93.296	ENSPSIG00000006539	ARL1	99	93.296	Pelodiscus_sinensis
ENSXMAG00000028338	arl1	97	96.296	ENSPMGG00000004070	arl1	98	95.783	Periophthalmus_magnuspinnatus
ENSXMAG00000028338	arl1	93	93.413	ENSPEMG00000008781	Arl1	99	92.737	Peromyscus_maniculatus_bairdii
ENSXMAG00000028338	arl1	100	90.503	ENSPMAG00000002070	arl1	99	90.503	Petromyzon_marinus
ENSXMAG00000028338	arl1	100	91.620	ENSPCIG00000009683	-	96	91.620	Phascolarctos_cinereus
ENSXMAG00000028338	arl1	100	98.324	ENSPFOG00000003241	arl1	99	98.324	Poecilia_formosa
ENSXMAG00000028338	arl1	100	98.324	ENSPLAG00000012898	arl1	99	98.324	Poecilia_latipinna
ENSXMAG00000028338	arl1	100	98.324	ENSPMEG00000005938	arl1	96	98.324	Poecilia_mexicana
ENSXMAG00000028338	arl1	100	98.324	ENSPREG00000013361	arl1	96	98.324	Poecilia_reticulata
ENSXMAG00000028338	arl1	91	94.488	ENSPPYG00000004872	ARL1	99	91.620	Pongo_abelii
ENSXMAG00000028338	arl1	97	91.111	ENSPCOG00000015554	-	98	90.230	Propithecus_coquereli
ENSXMAG00000028338	arl1	91	95.276	ENSPVAG00000008119	ARL1	94	92.179	Pteropus_vampyrus
ENSXMAG00000028338	arl1	100	97.765	ENSPNYG00000011671	arl1	99	97.765	Pundamilia_nyererei
ENSXMAG00000028338	arl1	96	99.254	ENSPNAG00000028795	arl1	99	98.788	Pygocentrus_nattereri
ENSXMAG00000028338	arl1	93	93.413	ENSRNOG00000005763	Arl1	99	92.737	Rattus_norvegicus
ENSXMAG00000028338	arl1	91	94.488	ENSRBIG00000042560	ARL1	99	91.620	Rhinopithecus_bieti
ENSXMAG00000028338	arl1	91	94.488	ENSRROG00000037996	ARL1	99	91.620	Rhinopithecus_roxellana
ENSXMAG00000028338	arl1	91	95.276	ENSSBOG00000024352	-	99	92.179	Saimiri_boliviensis_boliviensis
ENSXMAG00000028338	arl1	100	91.620	ENSSHAG00000004634	ARL1	99	91.620	Sarcophilus_harrisii
ENSXMAG00000028338	arl1	100	95.531	ENSSFOG00015001665	arl1	99	95.531	Scleropages_formosus
ENSXMAG00000028338	arl1	100	95.531	ENSSMAG00000016416	arl1	99	95.531	Scophthalmus_maximus
ENSXMAG00000028338	arl1	96	99.254	ENSSDUG00000013898	arl1	93	98.788	Seriola_dumerili
ENSXMAG00000028338	arl1	100	96.648	ENSSLDG00000012946	arl1	99	96.648	Seriola_lalandi_dorsalis
ENSXMAG00000028338	arl1	92	95.312	ENSSARG00000013944	ARL1	100	91.061	Sorex_araneus
ENSXMAG00000028338	arl1	100	93.296	ENSSPUG00000004578	ARL1	99	93.296	Sphenodon_punctatus
ENSXMAG00000028338	arl1	100	96.089	ENSSPAG00000014633	arl1	99	96.089	Stegastes_partitus
ENSXMAG00000028338	arl1	91	95.276	ENSSSCG00000000870	ARL1	99	92.179	Sus_scrofa
ENSXMAG00000028338	arl1	100	93.296	ENSTGUG00000009085	-	100	93.296	Taeniopygia_guttata
ENSXMAG00000028338	arl1	100	93.855	ENSTRUG00000006254	arl1	99	93.855	Takifugu_rubripes
ENSXMAG00000028338	arl1	100	93.855	ENSTNIG00000006920	arl1	98	93.855	Tetraodon_nigroviridis
ENSXMAG00000028338	arl1	91	95.276	ENSTBEG00000015546	ARL1	99	90.556	Tupaia_belangeri
ENSXMAG00000028338	arl1	91	95.276	ENSTTRG00000017202	ARL1	94	92.179	Tursiops_truncatus
ENSXMAG00000028338	arl1	91	95.276	ENSUMAG00000019547	ARL1	99	92.179	Ursus_maritimus
ENSXMAG00000028338	arl1	91	95.276	ENSVPAG00000011621	ARL1	94	92.179	Vicugna_pacos
ENSXMAG00000028338	arl1	91	95.276	ENSVVUG00000018044	ARL1	99	92.179	Vulpes_vulpes
ENSXMAG00000028338	arl1	96	96.269	ENSXETG00000002540	arl1	99	93.296	Xenopus_tropicalis