EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000028401 (Gene tree)
Gene ID: 102237969
Gene Symbol: srpra
Alias: id:ibd1064|srpr|wu:fd12f02
Full Name: SRP receptor subunit alpha
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Minus strand
Length: 13996 bases
Position: chr18:13867008-13881003
Accession: 102237969
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000038126	SRP54	PF00448.22	7.9e-48	1	1
ENSXMAP00000023221	SRP54	PF00448.22	5.1e-36	1	1
ENSXMAP00000038126	SRP54_N	PF02881.19	3.9e-09	1	1
ENSXMAP00000023221	SRP54_N	PF02881.19	4.1e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000042008	-	5656	-	ENSXMAP00000023221	627 (aa)	-	-
ENSXMAT00000026767	-	5517	XM_023351845	ENSXMAP00000038126	647 (aa)	XP_023207613	UPI000C6EC550

Gene Model

Click here to download ENSXMAG00000028401's gene model file

Pathways

Pathway ID	Pathway Name	Source
xma03060	Protein export	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000028401's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000028401	srpra	100	68.855	ENSG00000182934	SRPRA	100	68.397	Homo_sapiens
ENSXMAG00000028401	srpra	100	89.538	ENSAPOG00000017588	srpra	100	89.538	Acanthochromis_polyacanthus
ENSXMAG00000028401	srpra	100	68.627	ENSAMEG00000000117	SRPRA	100	68.072	Ailuropoda_melanoleuca
ENSXMAG00000028401	srpra	100	83.771	ENSACIG00000021588	srpra	100	85.162	Amphilophus_citrinellus
ENSXMAG00000028401	srpra	100	89.692	ENSAOCG00000018884	srpra	100	89.692	Amphiprion_ocellaris
ENSXMAG00000028401	srpra	100	89.692	ENSAPEG00000022286	srpra	92	89.692	Amphiprion_percula
ENSXMAG00000028401	srpra	100	85.583	ENSATEG00000023578	srpra	100	86.043	Anabas_testudineus
ENSXMAG00000028401	srpra	94	71.336	ENSAPLG00000016079	SRPRA	99	70.915	Anas_platyrhynchos
ENSXMAG00000028401	srpra	100	72.214	ENSACAG00000000108	SRPRA	100	72.214	Anolis_carolinensis
ENSXMAG00000028401	srpra	100	68.168	ENSANAG00000020346	SRPRA	100	67.830	Aotus_nancymaae
ENSXMAG00000028401	srpra	100	86.862	ENSACLG00000000518	srpra	100	86.862	Astatotilapia_calliptera
ENSXMAG00000028401	srpra	100	72.881	ENSAMXG00000009975	srpra	100	72.334	Astyanax_mexicanus
ENSXMAG00000028401	srpra	100	68.636	ENSBTAG00000014105	SRPRA	100	68.079	Bos_taurus
ENSXMAG00000028401	srpra	99	48.939	WBGene00009521	F38A1.8	99	48.788	Caenorhabditis_elegans
ENSXMAG00000028401	srpra	100	67.625	ENSCJAG00000008752	SRPRA	100	67.428	Callithrix_jacchus
ENSXMAG00000028401	srpra	100	67.375	ENSCAFG00000010474	SRPRA	100	66.058	Canis_familiaris
ENSXMAG00000028401	srpra	100	69.044	ENSCAFG00020010608	SRPRA	100	67.732	Canis_lupus_dingo
ENSXMAG00000028401	srpra	100	68.986	ENSCHIG00000012423	SRPRA	100	67.273	Capra_hircus
ENSXMAG00000028401	srpra	80	82.073	ENSTSYG00000005187	SRPRA	90	87.619	Carlito_syrichta
ENSXMAG00000028401	srpra	95	65.971	ENSCAPG00000007098	SRPRA	91	88.722	Cavia_aperea
ENSXMAG00000028401	srpra	100	68.445	ENSCPOG00000014976	SRPRA	91	88.722	Cavia_porcellus
ENSXMAG00000028401	srpra	100	68.788	ENSCCAG00000025602	SRPRA	100	67.781	Cebus_capucinus
ENSXMAG00000028401	srpra	100	68.182	ENSCATG00000039354	SRPRA	100	67.982	Cercocebus_atys
ENSXMAG00000028401	srpra	100	69.138	ENSCLAG00000016839	SRPRA	100	68.341	Chinchilla_lanigera
ENSXMAG00000028401	srpra	100	67.669	ENSCSAG00000002271	SRPRA	100	67.830	Chlorocebus_sabaeus
ENSXMAG00000028401	srpra	54	87.755	ENSCHOG00000010015	-	71	87.755	Choloepus_hoffmanni
ENSXMAG00000028401	srpra	100	71.472	ENSCPBG00000011128	SRPRA	100	71.624	Chrysemys_picta_bellii
ENSXMAG00000028401	srpra	99	58.346	ENSCING00000008954	-	100	57.143	Ciona_intestinalis
ENSXMAG00000028401	srpra	99	58.877	ENSCSAVG00000005602	-	100	58.218	Ciona_savignyi
ENSXMAG00000028401	srpra	100	68.030	ENSCANG00000032337	SRPRA	100	67.927	Colobus_angolensis_palliatus
ENSXMAG00000028401	srpra	100	68.468	ENSCGRG00001017670	Srpr	100	68.493	Cricetulus_griseus_chok1gshd
ENSXMAG00000028401	srpra	100	68.468	ENSCGRG00000009892	Srpr	90	88.889	Cricetulus_griseus_crigri
ENSXMAG00000028401	srpra	100	85.299	ENSCSEG00000002374	srpra	100	85.299	Cynoglossus_semilaevis
ENSXMAG00000028401	srpra	100	90.199	ENSCVAG00000019881	srpra	100	90.199	Cyprinodon_variegatus
ENSXMAG00000028401	srpra	100	78.321	ENSDARG00000061124	srpra	100	78.015	Danio_rerio
ENSXMAG00000028401	srpra	100	68.429	ENSDNOG00000010821	SRPRA	100	67.016	Dasypus_novemcinctus
ENSXMAG00000028401	srpra	100	67.825	ENSDORG00000016719	Srpr	100	68.589	Dipodomys_ordii
ENSXMAG00000028401	srpra	99	50.920	FBgn0010391	Gtp-bp	100	51.756	Drosophila_melanogaster
ENSXMAG00000028401	srpra	100	67.474	ENSETEG00000013956	SRPRA	100	67.519	Echinops_telfairi
ENSXMAG00000028401	srpra	50	83.333	ENSEBUG00000002602	srpra	73	83.810	Eptatretus_burgeri
ENSXMAG00000028401	srpra	100	68.389	ENSEASG00005022980	SRPRA	100	66.871	Equus_asinus_asinus
ENSXMAG00000028401	srpra	100	68.389	ENSECAG00000014692	SRPRA	100	66.871	Equus_caballus
ENSXMAG00000028401	srpra	100	62.980	ENSEEUG00000007920	SRPRA	100	63.182	Erinaceus_europaeus
ENSXMAG00000028401	srpra	100	84.686	ENSELUG00000017643	srpra	100	84.639	Esox_lucius
ENSXMAG00000028401	srpra	100	69.486	ENSFCAG00000011274	-	100	67.125	Felis_catus
ENSXMAG00000028401	srpra	83	64.045	ENSFCAG00000030894	-	99	61.027	Felis_catus
ENSXMAG00000028401	srpra	99	69.172	ENSFALG00000005048	SRPRA	99	68.356	Ficedula_albicollis
ENSXMAG00000028401	srpra	100	67.322	ENSFDAG00000016229	SRPRA	93	84.722	Fukomys_damarensis
ENSXMAG00000028401	srpra	100	92.780	ENSFHEG00000016959	srpra	100	92.780	Fundulus_heteroclitus
ENSXMAG00000028401	srpra	100	81.077	ENSGMOG00000013244	srpra	100	81.077	Gadus_morhua
ENSXMAG00000028401	srpra	100	71.624	ENSGALG00000030759	SRPRA	100	71.385	Gallus_gallus
ENSXMAG00000028401	srpra	100	97.218	ENSGAFG00000000453	srpra	100	97.218	Gambusia_affinis
ENSXMAG00000028401	srpra	100	83.155	ENSGACG00000006550	srpra	100	83.155	Gasterosteus_aculeatus
ENSXMAG00000028401	srpra	100	71.624	ENSGAGG00000021157	SRPRA	100	71.775	Gopherus_agassizii
ENSXMAG00000028401	srpra	100	68.855	ENSGGOG00000012962	SRPRA	100	68.397	Gorilla_gorilla
ENSXMAG00000028401	srpra	100	86.708	ENSHBUG00000000119	srpra	100	86.708	Haplochromis_burtoni
ENSXMAG00000028401	srpra	100	68.168	ENSHGLG00000001597	SRPR	94	89.394	Heterocephalus_glaber_female
ENSXMAG00000028401	srpra	100	68.168	ENSHGLG00100006449	SRPR	94	89.394	Heterocephalus_glaber_male
ENSXMAG00000028401	srpra	100	84.992	ENSHCOG00000010749	srpra	100	85.145	Hippocampus_comes
ENSXMAG00000028401	srpra	94	74.839	ENSIPUG00000000867	srpra	99	74.677	Ictalurus_punctatus
ENSXMAG00000028401	srpra	100	68.950	ENSSTOG00000009897	SRPRA	100	67.781	Ictidomys_tridecemlineatus
ENSXMAG00000028401	srpra	100	67.820	ENSJJAG00000020272	Srpr	100	67.988	Jaculus_jaculus
ENSXMAG00000028401	srpra	100	88.650	ENSKMAG00000002280	srpra	100	88.957	Kryptolebias_marmoratus
ENSXMAG00000028401	srpra	100	87.250	ENSLBEG00000009608	srpra	100	87.404	Labrus_bergylta
ENSXMAG00000028401	srpra	100	70.242	ENSLACG00000017781	SRPRA	100	71.299	Latimeria_chalumnae
ENSXMAG00000028401	srpra	100	76.524	ENSLOCG00000002733	srpra	100	75.799	Lepisosteus_oculatus
ENSXMAG00000028401	srpra	100	68.196	ENSLAFG00000010252	SRPRA	100	67.365	Loxodonta_africana
ENSXMAG00000028401	srpra	100	67.820	ENSMFAG00000032606	SRPRA	100	67.982	Macaca_fascicularis
ENSXMAG00000028401	srpra	100	67.820	ENSMMUG00000007938	SRPRA	100	67.982	Macaca_mulatta
ENSXMAG00000028401	srpra	100	67.820	ENSMNEG00000030709	SRPRA	100	67.982	Macaca_nemestrina
ENSXMAG00000028401	srpra	100	68.182	ENSMLEG00000043404	SRPRA	100	67.982	Mandrillus_leucophaeus
ENSXMAG00000028401	srpra	100	84.923	ENSMAMG00000000473	srpra	100	85.538	Mastacembelus_armatus
ENSXMAG00000028401	srpra	100	86.862	ENSMZEG00005013432	srpra	100	86.862	Maylandia_zebra
ENSXMAG00000028401	srpra	94	70.617	ENSMGAG00000000732	SRPRA	100	70.521	Meleagris_gallopavo
ENSXMAG00000028401	srpra	100	68.127	ENSMAUG00000015648	Srpr	100	68.493	Mesocricetus_auratus
ENSXMAG00000028401	srpra	100	67.316	ENSMICG00000015981	SRPRA	100	68.079	Microcebus_murinus
ENSXMAG00000028401	srpra	100	69.254	ENSMOCG00000008311	Srpr	100	68.189	Microtus_ochrogaster
ENSXMAG00000028401	srpra	100	78.374	ENSMMOG00000005019	srpra	100	78.374	Mola_mola
ENSXMAG00000028401	srpra	100	69.102	ENSMODG00000004576	-	100	68.341	Monodelphis_domestica
ENSXMAG00000028401	srpra	100	87.385	ENSMALG00000011343	srpra	100	87.846	Monopterus_albus
ENSXMAG00000028401	srpra	100	68.902	MGP_CAROLIEiJ_G0031951	Srpr	86	90.152	Mus_caroli
ENSXMAG00000028401	srpra	100	69.466	ENSMUSG00000032042	Srpr	86	89.394	Mus_musculus
ENSXMAG00000028401	srpra	100	69.102	MGP_PahariEiJ_G0014816	Srpr	86	89.394	Mus_pahari
ENSXMAG00000028401	srpra	100	65.407	MGP_SPRETEiJ_G0033075	Srpr	100	64.358	Mus_spretus
ENSXMAG00000028401	srpra	100	68.389	ENSMPUG00000006626	SRPRA	100	67.431	Mustela_putorius_furo
ENSXMAG00000028401	srpra	100	68.702	ENSMLUG00000017334	SRPRA	100	67.477	Myotis_lucifugus
ENSXMAG00000028401	srpra	100	67.568	ENSNGAG00000015686	Srpr	100	67.732	Nannospalax_galili
ENSXMAG00000028401	srpra	100	86.090	ENSNBRG00000017311	srpra	100	86.090	Neolamprologus_brichardi
ENSXMAG00000028401	srpra	99	65.131	ENSNLEG00000007467	SRPRA	100	67.197	Nomascus_leucogenys
ENSXMAG00000028401	srpra	94	68.019	ENSMEUG00000004956	SRPRA	100	67.532	Notamacropus_eugenii
ENSXMAG00000028401	srpra	100	64.414	ENSOPRG00000013160	SRPRA	100	63.897	Ochotona_princeps
ENSXMAG00000028401	srpra	100	68.702	ENSODEG00000004730	SRPRA	100	68.702	Octodon_degus
ENSXMAG00000028401	srpra	100	86.244	ENSONIG00000005324	srpra	100	86.244	Oreochromis_niloticus
ENSXMAG00000028401	srpra	100	67.825	ENSOCUG00000017057	SRPRA	100	68.580	Oryctolagus_cuniculus
ENSXMAG00000028401	srpra	100	85.317	ENSORLG00000014676	srpra	100	85.362	Oryzias_latipes
ENSXMAG00000028401	srpra	100	85.162	ENSORLG00020009240	srpra	100	85.208	Oryzias_latipes_hni
ENSXMAG00000028401	srpra	100	84.853	ENSORLG00015015405	srpra	100	84.900	Oryzias_latipes_hsok
ENSXMAG00000028401	srpra	100	85.781	ENSOMEG00000005872	srpra	100	85.824	Oryzias_melastigma
ENSXMAG00000028401	srpra	100	68.778	ENSOGAG00000008926	SRPRA	100	67.421	Otolemur_garnettii
ENSXMAG00000028401	srpra	100	66.061	ENSOARG00000012397	SRPRA	100	65.408	Ovis_aries
ENSXMAG00000028401	srpra	100	68.855	ENSPPAG00000030813	SRPRA	100	68.397	Pan_paniscus
ENSXMAG00000028401	srpra	100	69.486	ENSPPRG00000001542	SRPRA	100	67.125	Panthera_pardus
ENSXMAG00000028401	srpra	100	69.335	ENSPTIG00000006989	SRPRA	100	66.972	Panthera_tigris_altaica
ENSXMAG00000028401	srpra	100	68.855	ENSPTRG00000028360	SRPRA	100	68.397	Pan_troglodytes
ENSXMAG00000028401	srpra	100	67.820	ENSPANG00000010858	SRPRA	100	67.982	Papio_anubis
ENSXMAG00000028401	srpra	100	76.344	ENSPKIG00000016106	srpra	100	76.344	Paramormyrops_kingsleyae
ENSXMAG00000028401	srpra	94	71.313	ENSPSIG00000012009	SRPRA	100	71.036	Pelodiscus_sinensis
ENSXMAG00000028401	srpra	100	84.438	ENSPMGG00000001393	srpra	100	83.846	Periophthalmus_magnuspinnatus
ENSXMAG00000028401	srpra	100	69.406	ENSPEMG00000018279	Srpr	100	68.341	Peromyscus_maniculatus_bairdii
ENSXMAG00000028401	srpra	99	63.441	ENSPMAG00000009559	srpra	99	63.497	Petromyzon_marinus
ENSXMAG00000028401	srpra	100	68.654	ENSPCIG00000010207	SRPRA	100	68.189	Phascolarctos_cinereus
ENSXMAG00000028401	srpra	100	96.000	ENSPFOG00000003114	srpra	100	96.000	Poecilia_formosa
ENSXMAG00000028401	srpra	100	95.846	ENSPLAG00000007323	srpra	100	95.846	Poecilia_latipinna
ENSXMAG00000028401	srpra	100	96.154	ENSPMEG00000015658	srpra	100	96.154	Poecilia_mexicana
ENSXMAG00000028401	srpra	100	96.000	ENSPREG00000004937	srpra	100	96.000	Poecilia_reticulata
ENSXMAG00000028401	srpra	89	86.842	ENSPPYG00000004045	SRPRA	100	86.842	Pongo_abelii
ENSXMAG00000028401	srpra	60	90.698	ENSPCAG00000003801	-	62	90.698	Procavia_capensis
ENSXMAG00000028401	srpra	100	67.964	ENSPCOG00000025726	SRPRA	100	67.781	Propithecus_coquereli
ENSXMAG00000028401	srpra	100	68.798	ENSPVAG00000000993	SRPRA	100	68.702	Pteropus_vampyrus
ENSXMAG00000028401	srpra	100	86.862	ENSPNYG00000012371	srpra	100	86.862	Pundamilia_nyererei
ENSXMAG00000028401	srpra	100	78.988	ENSPNAG00000013476	srpra	100	79.141	Pygocentrus_nattereri
ENSXMAG00000028401	srpra	100	69.102	ENSRNOG00000010543	Srpra	100	68.341	Rattus_norvegicus
ENSXMAG00000028401	srpra	100	68.892	ENSRBIG00000008702	SRPRA	100	67.830	Rhinopithecus_bieti
ENSXMAG00000028401	srpra	100	67.820	ENSRROG00000029494	SRPRA	100	68.085	Rhinopithecus_roxellana
ENSXMAG00000028401	srpra	54	40.054	YDR292C	-	52	41.945	Saccharomyces_cerevisiae
ENSXMAG00000028401	srpra	100	67.674	ENSSBOG00000035892	SRPRA	100	67.678	Saimiri_boliviensis_boliviensis
ENSXMAG00000028401	srpra	94	67.752	ENSSHAG00000009168	SRPRA	100	67.101	Sarcophilus_harrisii
ENSXMAG00000028401	srpra	100	72.952	ENSSFOG00015008837	srpra	100	73.457	Scleropages_formosus
ENSXMAG00000028401	srpra	100	78.187	ENSSMAG00000002783	srpra	100	78.034	Scophthalmus_maximus
ENSXMAG00000028401	srpra	100	88.190	ENSSDUG00000013920	srpra	92	88.190	Seriola_dumerili
ENSXMAG00000028401	srpra	100	88.037	ENSSLDG00000008601	srpra	93	88.037	Seriola_lalandi_dorsalis
ENSXMAG00000028401	srpra	83	85.366	ENSSARG00000012434	SRPRA	86	85.366	Sorex_araneus
ENSXMAG00000028401	srpra	100	68.468	ENSSPUG00000018221	SRPRA	100	68.333	Sphenodon_punctatus
ENSXMAG00000028401	srpra	100	89.571	ENSSPAG00000005103	srpra	100	89.571	Stegastes_partitus
ENSXMAG00000028401	srpra	100	68.835	ENSSSCG00000015227	SRPRA	100	68.429	Sus_scrofa
ENSXMAG00000028401	srpra	94	69.805	ENSTGUG00000000815	SRPRA	100	68.780	Taeniopygia_guttata
ENSXMAG00000028401	srpra	100	84.592	ENSTRUG00000006856	srpra	100	84.414	Takifugu_rubripes
ENSXMAG00000028401	srpra	100	79.242	ENSTNIG00000010316	srpra	100	79.242	Tetraodon_nigroviridis
ENSXMAG00000028401	srpra	100	68.127	ENSTTRG00000001558	SRPRA	100	66.971	Tursiops_truncatus
ENSXMAG00000028401	srpra	100	67.868	ENSUAMG00000005510	SRPRA	100	68.072	Ursus_americanus
ENSXMAG00000028401	srpra	96	62.578	ENSUMAG00000002269	SRPRA	100	61.515	Ursus_maritimus
ENSXMAG00000028401	srpra	69	90.698	ENSVPAG00000001077	SRPRA	75	90.698	Vicugna_pacos
ENSXMAG00000028401	srpra	100	68.950	ENSVVUG00000020094	SRPRA	100	67.424	Vulpes_vulpes
ENSXMAG00000028401	srpra	100	60.274	ENSXETG00000003920	srpra	100	60.538	Xenopus_tropicalis
ENSXMAG00000028401	srpra	91	92.562	ENSXCOG00000001286	srpra	100	99.698	Xiphophorus_couchianus