EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSXMAG00000028579 (Gene tree)
Gene ID
102226563
Gene Symbol
-
Alias
-
Full Name
RNA-binding protein 38
Gene Type
protein_coding
Species
Xiphophorus_maculatus
Status
putative
Strand
Plus strand
Length
13916 bases
Position
chr20:27354481-27368396
Accession
102226563
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSXMAP00000029956RRM_1PF00076.221.1e-1611
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSXMAT00000042386-2432XM_005800639ENSXMAP00000029956247 (aa)XP_005800696UPI0003B586FB
Gene Model
Click here to download ENSXMAG00000028579's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000028579's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSXMAG00000028579-6076.000ENSG00000112183RBM249882.051Homo_sapiens
ENSXMAG00000028579-5380.153ENSAPOG00000019514rbm24a9861.475Acanthochromis_polyacanthus
ENSXMAG00000028579-6074.510ENSAPOG00000000789rbm24b9861.290Acanthochromis_polyacanthus
ENSXMAG00000028579-6069.281ENSACIG00000015650rbm24b9858.065Amphilophus_citrinellus
ENSXMAG00000028579-9259.426ENSACIG00000010987rbm24a9861.066Amphilophus_citrinellus
ENSXMAG00000028579-6074.510ENSAOCG00000023764rbm24b9861.290Amphiprion_ocellaris
ENSXMAG00000028579-5380.153ENSAOCG00000000378rbm24a9861.475Amphiprion_ocellaris
ENSXMAG00000028579-5380.153ENSAPEG00000012234rbm24a9861.475Amphiprion_percula
ENSXMAG00000028579-6074.510ENSAPEG00000010059rbm24b9861.290Amphiprion_percula
ENSXMAG00000028579-5380.153ENSATEG00000014195rbm24a9861.633Anabas_testudineus
ENSXMAG00000028579-6074.510ENSATEG00000005396rbm24b9860.887Anabas_testudineus
ENSXMAG00000028579-6076.667ENSACAG00000003962RBM249862.705Anolis_carolinensis
ENSXMAG00000028579-6076.000ENSANAG00000029310RBM249863.115Aotus_nancymaae
ENSXMAG00000028579-7266.154ENSACLG00000016929rbm24a9860.729Astatotilapia_calliptera
ENSXMAG00000028579-6073.203ENSACLG00000004207rbm24b9860.081Astatotilapia_calliptera
ENSXMAG00000028579-6074.000ENSAMXG00000040572rbm24a9861.157Astyanax_mexicanus
ENSXMAG00000028579-6076.000ENSBTAG00000015396RBM249863.115Bos_taurus
ENSXMAG00000028579-6076.000ENSCJAG00000006579RBM249863.115Callithrix_jacchus
ENSXMAG00000028579-6074.834ENSCAFG00020012640RBM249862.449Canis_lupus_dingo
ENSXMAG00000028579-6068.456ENSCHIG00000013536RBM249858.824Capra_hircus
ENSXMAG00000028579-6076.000ENSCPOG00000038459RBM249863.115Cavia_porcellus
ENSXMAG00000028579-6076.000ENSCCAG00000030791RBM249163.115Cebus_capucinus
ENSXMAG00000028579-6076.000ENSCATG00000010509RBM249263.115Cercocebus_atys
ENSXMAG00000028579-6076.000ENSCLAG00000002136RBM249863.115Chinchilla_lanigera
ENSXMAG00000028579-6076.000ENSCSAG00000007599RBM249863.115Chlorocebus_sabaeus
ENSXMAG00000028579-6075.333ENSCPBG00000008291RBM249861.728Chrysemys_picta_bellii
ENSXMAG00000028579-6076.000ENSCANG00000030245RBM249263.115Colobus_angolensis_palliatus
ENSXMAG00000028579-6076.667ENSCGRG00001010535Rbm249863.115Cricetulus_griseus_chok1gshd
ENSXMAG00000028579-6076.667ENSCGRG00000011732Rbm249863.115Cricetulus_griseus_crigri
ENSXMAG00000028579-6074.834ENSCSEG00000017958rbm24a9862.449Cynoglossus_semilaevis
ENSXMAG00000028579-6071.795ENSCSEG00000004378rbm24b8958.964Cynoglossus_semilaevis
ENSXMAG00000028579-6074.839ENSCVAG00000011805rbm24b9861.508Cyprinodon_variegatus
ENSXMAG00000028579-7267.188ENSCVAG00000020675rbm24a9861.475Cyprinodon_variegatus
ENSXMAG00000028579-5177.519ENSDARG00000031809rbm24b9177.519Danio_rerio
ENSXMAG00000028579-6074.667ENSDARG00000102995rbm24a9783.929Danio_rerio
ENSXMAG00000028579-6076.000ENSDORG00000028400Rbm249863.115Dipodomys_ordii
ENSXMAG00000028579-7363.536ENSEBUG00000003787-8763.536Eptatretus_burgeri
ENSXMAG00000028579-5374.242ENSEBUG00000008945rbm24a6972.593Eptatretus_burgeri
ENSXMAG00000028579-6076.000ENSEASG00005011789RBM249863.115Equus_asinus_asinus
ENSXMAG00000028579-6076.000ENSECAG00000009819RBM249863.115Equus_caballus
ENSXMAG00000028579-5380.769ENSELUG00000002970-9762.195Esox_lucius
ENSXMAG00000028579-6171.613ENSELUG00000007163rbm24a9862.041Esox_lucius
ENSXMAG00000028579-6076.000ENSFCAG00000046251RBM249863.115Felis_catus
ENSXMAG00000028579-6276.282ENSFALG00000013398RBM246475.796Ficedula_albicollis
ENSXMAG00000028579-6049.677ENSFHEG00000015627rbm24b9846.429Fundulus_heteroclitus
ENSXMAG00000028579-7266.154ENSFHEG00000013449rbm24a9860.324Fundulus_heteroclitus
ENSXMAG00000028579-7267.742ENSGMOG00000007015rbm24b9859.833Gadus_morhua
ENSXMAG00000028579-5379.389ENSGMOG00000010412rbm24a6575.524Gadus_morhua
ENSXMAG00000028579-6076.510ENSGALG00000012712RBM249863.445Gallus_gallus
ENSXMAG00000028579-6968.681ENSGAFG00000010968rbm24a9862.083Gambusia_affinis
ENSXMAG00000028579-9558.824ENSGAFG00000013304-10060.246Gambusia_affinis
ENSXMAG00000028579-6074.839ENSGAFG00000006003rbm24b9861.508Gambusia_affinis
ENSXMAG00000028579-10099.595ENSGAFG00000020326-10099.595Gambusia_affinis
ENSXMAG00000028579-7269.519ENSGACG00000008472rbm24b9861.088Gasterosteus_aculeatus
ENSXMAG00000028579-6372.500ENSGACG00000005383rbm24a9862.869Gasterosteus_aculeatus
ENSXMAG00000028579-6076.000ENSGAGG00000016571RBM249862.140Gopherus_agassizii
ENSXMAG00000028579-6076.000ENSGGOG00000039093RBM249263.115Gorilla_gorilla
ENSXMAG00000028579-6073.203ENSHBUG00000017155rbm24b9860.081Haplochromis_burtoni
ENSXMAG00000028579-7266.154ENSHBUG00000003071rbm24a9860.729Haplochromis_burtoni
ENSXMAG00000028579-6075.333ENSHGLG00000008335RBM249862.705Heterocephalus_glaber_female
ENSXMAG00000028579-6073.248ENSHCOG00000000137rbm24b9860.870Hippocampus_comes
ENSXMAG00000028579-6073.684ENSIPUG00000014727rbm249861.382Ictalurus_punctatus
ENSXMAG00000028579-6076.000ENSSTOG00000022090RBM249863.115Ictidomys_tridecemlineatus
ENSXMAG00000028579-6077.181ENSJJAG00000021705Rbm249863.115Jaculus_jaculus
ENSXMAG00000028579-7992.857ENSKMAG00000006096-7891.707Kryptolebias_marmoratus
ENSXMAG00000028579-7265.803ENSKMAG00000006314rbm24a9860.816Kryptolebias_marmoratus
ENSXMAG00000028579-6074.026ENSLBEG00000000774rbm24b9862.651Labrus_bergylta
ENSXMAG00000028579-5380.153ENSLBEG00000003025rbm24a9861.224Labrus_bergylta
ENSXMAG00000028579-6075.497ENSLACG00000011111RBM249860.976Latimeria_chalumnae
ENSXMAG00000028579-6273.377ENSLOCG00000006244rbm24a9862.140Lepisosteus_oculatus
ENSXMAG00000028579-6076.000ENSLAFG00000000116RBM249862.449Loxodonta_africana
ENSXMAG00000028579-6076.000ENSMFAG00000034396RBM249863.115Macaca_fascicularis
ENSXMAG00000028579-6076.000ENSMMUG00000011384RBM249882.051Macaca_mulatta
ENSXMAG00000028579-6076.000ENSMNEG00000040710RBM249263.115Macaca_nemestrina
ENSXMAG00000028579-6074.675ENSMAMG00000012841rbm24b9861.290Mastacembelus_armatus
ENSXMAG00000028579-5380.153ENSMAMG00000013172rbm24a9861.633Mastacembelus_armatus
ENSXMAG00000028579-7266.154ENSMZEG00005004491rbm24a9860.729Maylandia_zebra
ENSXMAG00000028579-6073.203ENSMZEG00005014397rbm24b9860.081Maylandia_zebra
ENSXMAG00000028579-6076.667ENSMAUG00000011281Rbm249863.115Mesocricetus_auratus
ENSXMAG00000028579-6076.000ENSMICG00000032332RBM249161.728Microcebus_murinus
ENSXMAG00000028579-6076.667ENSMOCG00000016637Rbm249863.115Microtus_ochrogaster
ENSXMAG00000028579-5380.153ENSMMOG00000019054rbm24a6380.153Mola_mola
ENSXMAG00000028579-6074.510ENSMMOG00000001750rbm24b8882.609Mola_mola
ENSXMAG00000028579-6075.839ENSMODG00000010899RBM248962.963Monodelphis_domestica
ENSXMAG00000028579-6074.172ENSMALG00000014068rbm24a7073.457Monopterus_albus
ENSXMAG00000028579-6073.856ENSMALG00000011585rbm24b9860.887Monopterus_albus
ENSXMAG00000028579-6076.667MGP_CAROLIEiJ_G0018481Rbm249863.115Mus_caroli
ENSXMAG00000028579-6076.667ENSMUSG00000038132Rbm249863.115Mus_musculus
ENSXMAG00000028579-6076.667MGP_PahariEiJ_G0019548Rbm249863.115Mus_pahari
ENSXMAG00000028579-6076.667MGP_SPRETEiJ_G0019360Rbm249863.115Mus_spretus
ENSXMAG00000028579-6076.667ENSNGAG00000013939Rbm249863.115Nannospalax_galili
ENSXMAG00000028579-7266.154ENSNBRG00000012347rbm24a9860.729Neolamprologus_brichardi
ENSXMAG00000028579-6073.203ENSNBRG00000015853rbm24b9860.081Neolamprologus_brichardi
ENSXMAG00000028579-6076.000ENSNLEG00000001075RBM249771.354Nomascus_leucogenys
ENSXMAG00000028579-6050.667ENSMEUG00000015492RBM249847.737Notamacropus_eugenii
ENSXMAG00000028579-6162.252ENSOPRG00000012150-9954.472Ochotona_princeps
ENSXMAG00000028579-6076.000ENSODEG00000006411RBM249863.115Octodon_degus
ENSXMAG00000028579-6073.856ENSONIG00000003010rbm24b9860.887Oreochromis_niloticus
ENSXMAG00000028579-7266.154ENSONIG00000002504rbm24a9360.569Oreochromis_niloticus
ENSXMAG00000028579-6374.684ENSOANG00000011865RBM249374.684Ornithorhynchus_anatinus
ENSXMAG00000028579-6074.839ENSORLG00000007916rbm24b9861.847Oryzias_latipes
ENSXMAG00000028579-5380.153ENSORLG00000012546rbm24a9861.475Oryzias_latipes
ENSXMAG00000028579-6074.839ENSORLG00020014541rbm24b9861.847Oryzias_latipes_hni
ENSXMAG00000028579-5380.153ENSORLG00020005859rbm24a9861.066Oryzias_latipes_hni
ENSXMAG00000028579-5380.153ENSORLG00015013567rbm24a9861.885Oryzias_latipes_hsok
ENSXMAG00000028579-6074.839ENSORLG00015000583rbm24b9861.847Oryzias_latipes_hsok
ENSXMAG00000028579-6073.718ENSOMEG00000021525rbm24b9861.200Oryzias_melastigma
ENSXMAG00000028579-5380.153ENSOMEG00000011760rbm24a9861.475Oryzias_melastigma
ENSXMAG00000028579-6076.000ENSOGAG00000027311RBM249863.115Otolemur_garnettii
ENSXMAG00000028579-6076.000ENSPPRG00000005000RBM249863.115Panthera_pardus
ENSXMAG00000028579-6076.000ENSPTRG00000017749RBM249163.115Pan_troglodytes
ENSXMAG00000028579-6076.000ENSPANG00000033323RBM249863.115Papio_anubis
ENSXMAG00000028579-7265.445ENSPKIG00000019760-8368.063Paramormyrops_kingsleyae
ENSXMAG00000028579-9457.083ENSPKIG00000001701rbm24a9862.397Paramormyrops_kingsleyae
ENSXMAG00000028579-6075.333ENSPSIG00000006920RBM249861.885Pelodiscus_sinensis
ENSXMAG00000028579-6174.194ENSPMGG00000011993rbm24b8385.321Periophthalmus_magnuspinnatus
ENSXMAG00000028579-8057.589ENSPMAG00000005910rbm24a8362.189Petromyzon_marinus
ENSXMAG00000028579-6075.333ENSPCIG00000029674RBM249862.963Phascolarctos_cinereus
ENSXMAG00000028579-7266.495ENSPFOG00000013132rbm24a9860.163Poecilia_formosa
ENSXMAG00000028579-10096.838ENSPFOG00000005096-10096.838Poecilia_formosa
ENSXMAG00000028579-6074.839ENSPLAG00000019473rbm24b9861.508Poecilia_latipinna
ENSXMAG00000028579-7166.146ENSPLAG00000006542rbm24a9159.836Poecilia_latipinna
ENSXMAG00000028579-6074.839ENSPMEG00000022792rbm24b9861.508Poecilia_mexicana
ENSXMAG00000028579-6074.839ENSPMEG00000009382-9861.508Poecilia_mexicana
ENSXMAG00000028579-7266.495ENSPMEG00000021740rbm24a9860.163Poecilia_mexicana
ENSXMAG00000028579-10099.190ENSPMEG00000020921-10099.190Poecilia_mexicana
ENSXMAG00000028579-7266.495ENSPREG00000007414rbm24a9859.514Poecilia_reticulata
ENSXMAG00000028579-10097.619ENSPREG00000016652-10097.619Poecilia_reticulata
ENSXMAG00000028579-6074.839ENSPREG00000000762rbm24b9861.508Poecilia_reticulata
ENSXMAG00000028579-6076.000ENSPPYG00000016256RBM249863.115Pongo_abelii
ENSXMAG00000028579-6076.000ENSPCAG00000015152RBM249862.857Procavia_capensis
ENSXMAG00000028579-6076.000ENSPCOG00000015077RBM249863.115Propithecus_coquereli
ENSXMAG00000028579-6076.000ENSPVAG00000004954RBM249863.115Pteropus_vampyrus
ENSXMAG00000028579-6073.203ENSPNYG00000015684rbm24b9860.081Pundamilia_nyererei
ENSXMAG00000028579-7266.154ENSPNYG00000011118rbm24a9860.729Pundamilia_nyererei
ENSXMAG00000028579-7271.277ENSPNAG00000018604rbm24b9864.435Pygocentrus_nattereri
ENSXMAG00000028579-6074.000ENSPNAG00000003816rbm24a9860.656Pygocentrus_nattereri
ENSXMAG00000028579-6075.497ENSRNOG00000046547Rbm249962.449Rattus_norvegicus
ENSXMAG00000028579-6076.000ENSRBIG00000044451RBM249863.115Rhinopithecus_bieti
ENSXMAG00000028579-6076.000ENSRROG00000029486RBM249863.115Rhinopithecus_roxellana
ENSXMAG00000028579-6076.510ENSSBOG00000030002RBM249863.115Saimiri_boliviensis_boliviensis
ENSXMAG00000028579-6075.333ENSSHAG00000016729RBM249162.963Sarcophilus_harrisii
ENSXMAG00000028579-6458.125ENSSFOG00015000915rbm24b9850.644Scleropages_formosus
ENSXMAG00000028579-10068.254ENSSFOG00015020384-9769.298Scleropages_formosus
ENSXMAG00000028579-5380.153ENSSFOG00015011094rbm24a5880.153Scleropages_formosus
ENSXMAG00000028579-5380.153ENSSMAG00000008449rbm24a9861.382Scophthalmus_maximus
ENSXMAG00000028579-6073.377ENSSMAG00000020117rbm24b8459.839Scophthalmus_maximus
ENSXMAG00000028579-6075.163ENSSDUG00000005955rbm24b9861.290Seriola_dumerili
ENSXMAG00000028579-5380.153ENSSDUG00000010760rbm24a9861.885Seriola_dumerili
ENSXMAG00000028579-5380.153ENSSLDG00000012657rbm24a9861.885Seriola_lalandi_dorsalis
ENSXMAG00000028579-6073.856ENSSLDG00000015378rbm24b9860.484Seriola_lalandi_dorsalis
ENSXMAG00000028579-6075.333ENSSPUG00000016665RBM249862.140Sphenodon_punctatus
ENSXMAG00000028579-6074.510ENSSPAG00000007941rbm24b9861.290Stegastes_partitus
ENSXMAG00000028579-5380.153ENSSPAG00000014990rbm24a9861.475Stegastes_partitus
ENSXMAG00000028579-6076.000ENSSSCG00000038455RBM249863.115Sus_scrofa
ENSXMAG00000028579-6076.510ENSTGUG00000005984RBM249863.180Taeniopygia_guttata
ENSXMAG00000028579-6072.848ENSTRUG00000010089rbm24a9860.408Takifugu_rubripes
ENSXMAG00000028579-6073.856ENSTRUG00000014826rbm24b9862.348Takifugu_rubripes
ENSXMAG00000028579-7268.649ENSTNIG00000009181rbm24a8868.649Tetraodon_nigroviridis
ENSXMAG00000028579-7269.841ENSTNIG00000018417rbm24b9863.333Tetraodon_nigroviridis
ENSXMAG00000028579-8158.373ENSTNIG00000012600-9359.204Tetraodon_nigroviridis
ENSXMAG00000028579-6076.000ENSTTRG00000000393RBM249862.857Tursiops_truncatus
ENSXMAG00000028579-6077.027ENSXETG00000024618rbm249763.750Xenopus_tropicalis
ENSXMAG00000028579-7266.495ENSXCOG00000020100rbm24a9859.514Xiphophorus_couchianus
ENSXMAG00000028579-6074.839ENSXCOG00000019779rbm24b9861.508Xiphophorus_couchianus
ENSXMAG00000028579-6074.839ENSXMAG00000014017rbm24b9861.508Xiphophorus_maculatus
ENSXMAG00000028579-7266.495ENSXMAG00000029809rbm24a9859.514Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us