EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000028638 (Gene tree)
Gene ID: 102218098
Gene Symbol: neil3
Alias: zgc:103553
Full Name: nei like DNA glycosylase 3
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Minus strand
Length: 21451 bases
Position: chr23:2465453-2486903
Accession: 102218098
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000024646	zf-RanBP	PF00641.18	8.7e-07	1	1
ENSXMAP00000037935	zf-RanBP	PF00641.18	8.7e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000035988	-	5758	XM_023329032	ENSXMAP00000024646	580 (aa)	XP_023184800	M3ZJ45
ENSXMAT00000025205	-	5695	-	ENSXMAP00000037935	580 (aa)	-	M3ZJ45

Gene Model

Click here to download ENSXMAG00000028638's gene model file

Pathways

Pathway ID	Pathway Name	Source
xma03410	Base excision repair	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000028638's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000028638	neil3	100	49.838	ENSG00000109674	NEIL3	100	49.838	Homo_sapiens
ENSXMAG00000028638	neil3	100	78.045	ENSACIG00000002265	neil3	100	78.045	Amphilophus_citrinellus
ENSXMAG00000028638	neil3	100	76.410	ENSATEG00000004193	neil3	100	76.410	Anabas_testudineus
ENSXMAG00000028638	neil3	100	45.557	ENSANAG00000026464	NEIL3	100	45.557	Aotus_nancymaae
ENSXMAG00000028638	neil3	100	80.756	ENSACLG00000011270	neil3	100	80.756	Astatotilapia_calliptera
ENSXMAG00000028638	neil3	100	49.268	ENSBTAG00000005825	NEIL3	100	49.268	Bos_taurus
ENSXMAG00000028638	neil3	100	48.792	ENSCJAG00000005464	NEIL3	100	48.792	Callithrix_jacchus
ENSXMAG00000028638	neil3	100	49.674	ENSCHIG00000009157	NEIL3	100	49.674	Capra_hircus
ENSXMAG00000028638	neil3	100	49.917	ENSTSYG00000014680	NEIL3	100	49.917	Carlito_syrichta
ENSXMAG00000028638	neil3	88	49.518	ENSCAPG00000006333	NEIL3	98	49.518	Cavia_aperea
ENSXMAG00000028638	neil3	100	49.103	ENSCPOG00000003297	NEIL3	100	49.103	Cavia_porcellus
ENSXMAG00000028638	neil3	100	49.273	ENSCCAG00000018838	NEIL3	100	49.273	Cebus_capucinus
ENSXMAG00000028638	neil3	100	49.755	ENSCLAG00000015661	NEIL3	100	49.755	Chinchilla_lanigera
ENSXMAG00000028638	neil3	100	49.026	ENSCSAG00000003064	NEIL3	100	49.026	Chlorocebus_sabaeus
ENSXMAG00000028638	neil3	73	69.307	ENSCHOG00000008101	NEIL3	74	69.307	Choloepus_hoffmanni
ENSXMAG00000028638	neil3	100	49.271	ENSCANG00000043622	NEIL3	100	49.271	Colobus_angolensis_palliatus
ENSXMAG00000028638	neil3	100	76.460	ENSCSEG00000003828	neil3	99	76.460	Cynoglossus_semilaevis
ENSXMAG00000028638	neil3	100	58.935	ENSDARG00000020079	neil3	100	58.935	Danio_rerio
ENSXMAG00000028638	neil3	89	50.189	ENSDNOG00000012236	NEIL3	100	50.189	Dasypus_novemcinctus
ENSXMAG00000028638	neil3	100	49.838	ENSEASG00005022272	NEIL3	100	49.838	Equus_asinus_asinus
ENSXMAG00000028638	neil3	100	49.595	ENSECAG00000009121	NEIL3	100	49.919	Equus_caballus
ENSXMAG00000028638	neil3	77	42.398	ENSEEUG00000010848	NEIL3	100	42.398	Erinaceus_europaeus
ENSXMAG00000028638	neil3	100	48.911	ENSFCAG00000004956	NEIL3	100	48.911	Felis_catus
ENSXMAG00000028638	neil3	100	81.271	ENSHBUG00000023848	neil3	100	81.271	Haplochromis_burtoni
ENSXMAG00000028638	neil3	89	50.286	ENSHGLG00000006643	NEIL3	100	50.286	Heterocephalus_glaber_female
ENSXMAG00000028638	neil3	89	50.286	ENSHGLG00100006959	NEIL3	100	50.286	Heterocephalus_glaber_male
ENSXMAG00000028638	neil3	100	48.287	ENSSTOG00000016245	NEIL3	100	48.287	Ictidomys_tridecemlineatus
ENSXMAG00000028638	neil3	65	50.895	ENSLACG00000000308	NEIL3	99	50.895	Latimeria_chalumnae
ENSXMAG00000028638	neil3	100	49.268	ENSMFAG00000002547	NEIL3	100	49.268	Macaca_fascicularis
ENSXMAG00000028638	neil3	100	49.431	ENSMMUG00000007394	NEIL3	100	49.431	Macaca_mulatta
ENSXMAG00000028638	neil3	100	49.271	ENSMNEG00000036177	NEIL3	100	49.271	Macaca_nemestrina
ENSXMAG00000028638	neil3	100	79.038	ENSMAMG00000017052	neil3	100	79.210	Mastacembelus_armatus
ENSXMAG00000028638	neil3	100	80.756	ENSMZEG00005001680	neil3	100	80.756	Maylandia_zebra
ENSXMAG00000028638	neil3	90	45.536	ENSMODG00000003813	NEIL3	99	45.536	Monodelphis_domestica
ENSXMAG00000028638	neil3	100	48.796	MGP_CAROLIEiJ_G0031052	Neil3	100	48.796	Mus_caroli
ENSXMAG00000028638	neil3	100	48.689	MGP_PahariEiJ_G0021518	Neil3	100	48.689	Mus_pahari
ENSXMAG00000028638	neil3	100	50.000	MGP_SPRETEiJ_G0032167	Neil3	100	50.000	Mus_spretus
ENSXMAG00000028638	neil3	100	75.345	ENSNBRG00000013229	neil3	100	75.345	Neolamprologus_brichardi
ENSXMAG00000028638	neil3	100	49.111	ENSNLEG00000016818	NEIL3	100	49.111	Nomascus_leucogenys
ENSXMAG00000028638	neil3	100	49.429	ENSODEG00000004102	NEIL3	100	49.592	Octodon_degus
ENSXMAG00000028638	neil3	100	81.959	ENSONIG00000001176	neil3	100	81.959	Oreochromis_niloticus
ENSXMAG00000028638	neil3	99	49.338	ENSOCUG00000001040	NEIL3	99	50.000	Oryctolagus_cuniculus
ENSXMAG00000028638	neil3	100	75.258	ENSOMEG00000014798	neil3	100	75.258	Oryzias_melastigma
ENSXMAG00000028638	neil3	100	47.974	ENSOGAG00000012624	NEIL3	100	47.974	Otolemur_garnettii
ENSXMAG00000028638	neil3	95	50.357	ENSOARG00000006852	NEIL3	99	50.357	Ovis_aries
ENSXMAG00000028638	neil3	100	50.645	ENSPPAG00000035318	NEIL3	100	50.645	Pan_paniscus
ENSXMAG00000028638	neil3	100	49.246	ENSPPRG00000003958	NEIL3	100	49.246	Panthera_pardus
ENSXMAG00000028638	neil3	100	49.414	ENSPTIG00000012966	NEIL3	100	49.414	Panthera_tigris_altaica
ENSXMAG00000028638	neil3	100	49.595	ENSPTRG00000016617	NEIL3	100	49.595	Pan_troglodytes
ENSXMAG00000028638	neil3	100	49.433	ENSPANG00000014727	NEIL3	100	49.433	Papio_anubis
ENSXMAG00000028638	neil3	100	94.483	ENSPFOG00000018858	neil3	100	94.483	Poecilia_formosa
ENSXMAG00000028638	neil3	100	94.310	ENSPLAG00000010685	neil3	100	94.310	Poecilia_latipinna
ENSXMAG00000028638	neil3	100	94.138	ENSPMEG00000013971	neil3	100	94.138	Poecilia_mexicana
ENSXMAG00000028638	neil3	100	89.310	ENSPREG00000009841	neil3	100	89.310	Poecilia_reticulata
ENSXMAG00000028638	neil3	68	68.317	ENSPCAG00000006386	NEIL3	77	68.317	Procavia_capensis
ENSXMAG00000028638	neil3	73	68.317	ENSPCOG00000010888	NEIL3	92	68.317	Propithecus_coquereli
ENSXMAG00000028638	neil3	99	48.534	ENSPVAG00000002255	NEIL3	99	48.534	Pteropus_vampyrus
ENSXMAG00000028638	neil3	100	79.038	ENSPNYG00000021276	neil3	100	79.038	Pundamilia_nyererei
ENSXMAG00000028638	neil3	98	53.940	ENSPNAG00000019983	neil3	100	53.940	Pygocentrus_nattereri
ENSXMAG00000028638	neil3	100	49.266	ENSRNOG00000011688	Neil3	100	49.266	Rattus_norvegicus
ENSXMAG00000028638	neil3	100	49.109	ENSRBIG00000023002	NEIL3	100	49.109	Rhinopithecus_bieti
ENSXMAG00000028638	neil3	100	49.595	ENSRROG00000000069	NEIL3	100	49.595	Rhinopithecus_roxellana
ENSXMAG00000028638	neil3	100	48.706	ENSSBOG00000032601	NEIL3	100	48.706	Saimiri_boliviensis_boliviensis
ENSXMAG00000028638	neil3	100	49.032	ENSSHAG00000007680	NEIL3	100	49.032	Sarcophilus_harrisii
ENSXMAG00000028638	neil3	100	77.663	ENSSMAG00000009621	neil3	100	78.007	Scophthalmus_maximus
ENSXMAG00000028638	neil3	100	49.508	ENSSSCG00000015771	NEIL3	100	49.508	Sus_scrofa
ENSXMAG00000028638	neil3	100	49.513	ENSTTRG00000013224	NEIL3	100	49.838	Tursiops_truncatus
ENSXMAG00000028638	neil3	100	44.643	ENSVPAG00000005020	NEIL3	100	44.643	Vicugna_pacos
ENSXMAG00000028638	neil3	92	89.552	ENSXCOG00000014831	neil3	99	89.552	Xiphophorus_couchianus