EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000028725 (Gene tree)
Gene ID: 102219686
Gene Symbol: srprb
Alias: wu:fk57h10|zgc:111820|zgc:92746
Full Name: SRP receptor subunit beta
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Minus strand
Length: 5514 bases
Position: chr18:23751022-23756535
Accession: 102219686
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000039432	MMR_HSR1	PF01926.23	1.3e-06	1	1
ENSXMAP00000025260	MMR_HSR1	PF01926.23	1.5e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000026423	-	3663	XM_023351856	ENSXMAP00000039432	258 (aa)	XP_023207624	UPI000C6E29C5
ENSXMAT00000037115	-	3514	-	ENSXMAP00000025260	272 (aa)	-	-

Gene Model

Click here to download ENSXMAG00000028725's gene model file

Pathways

Pathway ID	Pathway Name	Source
xma03060	Protein export	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000028725's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000028725	srprb	100	88.760	ENSAPOG00000021219	srprb	93	88.760	Acanthochromis_polyacanthus
ENSXMAG00000028725	srprb	99	87.843	ENSACIG00000014621	srprb	96	87.843	Amphilophus_citrinellus
ENSXMAG00000028725	srprb	100	87.209	ENSAOCG00000017265	srprb	93	87.209	Amphiprion_ocellaris
ENSXMAG00000028725	srprb	100	87.209	ENSAPEG00000024541	srprb	82	87.209	Amphiprion_percula
ENSXMAG00000028725	srprb	99	87.451	ENSATEG00000014016	srprb	93	87.451	Anabas_testudineus
ENSXMAG00000028725	srprb	100	87.645	ENSACLG00000016748	srprb	94	87.645	Astatotilapia_calliptera
ENSXMAG00000028725	srprb	98	72.222	ENSAMXG00000044118	srprb	95	72.222	Astyanax_mexicanus
ENSXMAG00000028725	srprb	100	84.109	ENSCSEG00000017194	srprb	94	84.109	Cynoglossus_semilaevis
ENSXMAG00000028725	srprb	100	91.085	ENSCVAG00000004221	srprb	97	91.085	Cyprinodon_variegatus
ENSXMAG00000028725	srprb	98	70.238	ENSDARG00000030949	srprb	95	70.238	Danio_rerio
ENSXMAG00000028725	srprb	99	80.469	ENSELUG00000009740	srprb	94	80.469	Esox_lucius
ENSXMAG00000028725	srprb	100	93.411	ENSFHEG00000006004	srprb	97	93.411	Fundulus_heteroclitus
ENSXMAG00000028725	srprb	98	85.375	ENSGMOG00000002081	srprb	94	85.375	Gadus_morhua
ENSXMAG00000028725	srprb	100	98.062	ENSGAFG00000012593	srprb	97	98.062	Gambusia_affinis
ENSXMAG00000028725	srprb	100	86.434	ENSGACG00000009891	srprb	95	86.434	Gasterosteus_aculeatus
ENSXMAG00000028725	srprb	100	87.645	ENSHBUG00000002145	srprb	94	87.645	Haplochromis_burtoni
ENSXMAG00000028725	srprb	100	82.510	ENSHCOG00000007732	srprb	99	82.510	Hippocampus_comes
ENSXMAG00000028725	srprb	98	67.460	ENSIPUG00000004177	srprb	94	67.460	Ictalurus_punctatus
ENSXMAG00000028725	srprb	100	86.822	ENSKMAG00000020736	srprb	97	86.822	Kryptolebias_marmoratus
ENSXMAG00000028725	srprb	99	87.891	ENSLBEG00000021483	srprb	93	87.891	Labrus_bergylta
ENSXMAG00000028725	srprb	100	70.656	ENSLOCG00000009740	srprb	87	69.112	Lepisosteus_oculatus
ENSXMAG00000028725	srprb	100	88.372	ENSMAMG00000011876	srprb	94	88.372	Mastacembelus_armatus
ENSXMAG00000028725	srprb	100	86.873	ENSMZEG00005016621	srprb	100	86.873	Maylandia_zebra
ENSXMAG00000028725	srprb	100	87.209	ENSMMOG00000012550	srprb	95	87.209	Mola_mola
ENSXMAG00000028725	srprb	100	86.822	ENSMALG00000012595	srprb	94	86.822	Monopterus_albus
ENSXMAG00000028725	srprb	73	87.831	ENSNBRG00000004699	srprb	88	81.340	Neolamprologus_brichardi
ENSXMAG00000028725	srprb	100	87.597	ENSONIG00000003788	srprb	77	87.597	Oreochromis_niloticus
ENSXMAG00000028725	srprb	100	82.946	ENSORLG00000006430	srprb	94	82.946	Oryzias_latipes
ENSXMAG00000028725	srprb	100	83.333	ENSORLG00020003413	srprb	94	83.333	Oryzias_latipes_hni
ENSXMAG00000028725	srprb	100	83.333	ENSORLG00015000166	srprb	94	83.333	Oryzias_latipes_hsok
ENSXMAG00000028725	srprb	100	84.884	ENSOMEG00000012735	srprb	94	84.884	Oryzias_melastigma
ENSXMAG00000028725	srprb	97	70.518	ENSPKIG00000013147	srprb	95	70.518	Paramormyrops_kingsleyae
ENSXMAG00000028725	srprb	98	82.213	ENSPMGG00000014061	srprb	92	82.213	Periophthalmus_magnuspinnatus
ENSXMAG00000028725	srprb	100	96.899	ENSPFOG00000011347	srprb	93	96.899	Poecilia_formosa
ENSXMAG00000028725	srprb	100	97.674	ENSPLAG00000001156	srprb	100	97.674	Poecilia_latipinna
ENSXMAG00000028725	srprb	100	96.512	ENSPMEG00000012169	srprb	100	96.512	Poecilia_mexicana
ENSXMAG00000028725	srprb	100	95.736	ENSPREG00000001449	srprb	100	95.736	Poecilia_reticulata
ENSXMAG00000028725	srprb	100	87.645	ENSPNYG00000005911	srprb	94	87.645	Pundamilia_nyererei
ENSXMAG00000028725	srprb	98	72.222	ENSPNAG00000009983	srprb	95	72.222	Pygocentrus_nattereri
ENSXMAG00000028725	srprb	98	74.409	ENSSFOG00015019355	srprb	95	74.409	Scleropages_formosus
ENSXMAG00000028725	srprb	100	85.659	ENSSMAG00000013202	srprb	94	85.659	Scophthalmus_maximus
ENSXMAG00000028725	srprb	100	87.597	ENSSDUG00000018746	srprb	88	87.597	Seriola_dumerili
ENSXMAG00000028725	srprb	100	87.984	ENSSLDG00000020560	srprb	94	87.984	Seriola_lalandi_dorsalis
ENSXMAG00000028725	srprb	100	87.984	ENSSPAG00000008898	srprb	93	87.984	Stegastes_partitus
ENSXMAG00000028725	srprb	100	86.434	ENSTRUG00000022463	srprb	94	86.434	Takifugu_rubripes
ENSXMAG00000028725	srprb	99	83.203	ENSTNIG00000007725	srprb	98	83.203	Tetraodon_nigroviridis
ENSXMAG00000028725	srprb	100	99.612	ENSXCOG00000012585	srprb	100	99.612	Xiphophorus_couchianus