EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000028767 (Gene tree)
Gene ID: -
Gene Symbol: snrpb
Alias: zgc:77315
Full Name: small nuclear ribonucleoprotein polypeptides B and B1
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 1425 bases
Position: chr20:5849156-5850580
Accession: ZDB-GENE-040426-1819
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000022713	LSM	PF01423.22	6.4e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000032142	-	705	-	ENSXMAP00000022713	234 (aa)	-	-

Gene Model

Click here to download ENSXMAG00000028767's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000028767's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000028767	snrpb	58	95.556	ENSG00000125835	SNRPB	66	97.826	Homo_sapiens
ENSXMAG00000028767	snrpb	58	100.000	ENSAPOG00000019606	snrpb	73	67.742	Acanthochromis_polyacanthus
ENSXMAG00000028767	snrpb	58	95.556	ENSAMEG00000011353	SNRPB	92	65.022	Ailuropoda_melanoleuca
ENSXMAG00000028767	snrpb	58	100.000	ENSACIG00000014480	snrpb	64	95.172	Amphilophus_citrinellus
ENSXMAG00000028767	snrpb	59	100.000	ENSAPEG00000021585	snrpb	62	100.000	Amphiprion_percula
ENSXMAG00000028767	snrpb	58	100.000	ENSATEG00000009836	snrpb	92	69.058	Anabas_testudineus
ENSXMAG00000028767	snrpb	57	97.744	ENSACAG00000002053	SNRPB	73	80.473	Anolis_carolinensis
ENSXMAG00000028767	snrpb	58	95.556	ENSANAG00000024443	-	93	65.022	Aotus_nancymaae
ENSXMAG00000028767	snrpb	58	88.148	ENSANAG00000036271	-	69	73.099	Aotus_nancymaae
ENSXMAG00000028767	snrpb	58	100.000	ENSACLG00000014707	snrpb	89	67.742	Astatotilapia_calliptera
ENSXMAG00000028767	snrpb	58	99.259	ENSAMXG00000029434	snrpb	79	77.320	Astyanax_mexicanus
ENSXMAG00000028767	snrpb	58	95.556	ENSBTAG00000001038	SNRPB	74	78.947	Bos_taurus
ENSXMAG00000028767	snrpb	58	95.556	ENSCJAG00000020971	-	74	78.947	Callithrix_jacchus
ENSXMAG00000028767	snrpb	86	72.381	ENSCJAG00000023097	-	71	76.608	Callithrix_jacchus
ENSXMAG00000028767	snrpb	58	95.556	ENSCAFG00000006693	-	74	78.947	Canis_familiaris
ENSXMAG00000028767	snrpb	58	83.704	ENSCAFG00000031109	-	70	69.231	Canis_familiaris
ENSXMAG00000028767	snrpb	58	95.556	ENSCAFG00020016981	-	93	65.022	Canis_lupus_dingo
ENSXMAG00000028767	snrpb	58	95.556	ENSCHIG00000025449	-	74	78.947	Capra_hircus
ENSXMAG00000028767	snrpb	58	95.556	ENSTSYG00000014498	-	74	78.947	Carlito_syrichta
ENSXMAG00000028767	snrpb	65	71.053	ENSTSYG00000032303	-	56	71.053	Carlito_syrichta
ENSXMAG00000028767	snrpb	58	95.556	ENSCAPG00000012669	SNRPB	93	65.022	Cavia_aperea
ENSXMAG00000028767	snrpb	58	95.556	ENSCPOG00000039408	SNRPB	74	78.947	Cavia_porcellus
ENSXMAG00000028767	snrpb	52	82.787	ENSCCAG00000035140	-	81	82.609	Cebus_capucinus
ENSXMAG00000028767	snrpb	58	95.556	ENSCCAG00000026002	SNRPB	93	65.022	Cebus_capucinus
ENSXMAG00000028767	snrpb	58	95.556	ENSCATG00000030230	SNRPB	74	78.947	Cercocebus_atys
ENSXMAG00000028767	snrpb	58	95.556	ENSCLAG00000012442	SNRPB	80	76.316	Chinchilla_lanigera
ENSXMAG00000028767	snrpb	58	95.556	ENSCSAG00000010840	SNRPB	74	78.947	Chlorocebus_sabaeus
ENSXMAG00000028767	snrpb	58	97.778	ENSCPBG00000026801	SNRPB	74	80.702	Chrysemys_picta_bellii
ENSXMAG00000028767	snrpb	58	95.556	ENSCANG00000019461	SNRPB	93	65.022	Colobus_angolensis_palliatus
ENSXMAG00000028767	snrpb	58	95.556	ENSCGRG00001023046	Snrpb	74	78.947	Cricetulus_griseus_chok1gshd
ENSXMAG00000028767	snrpb	58	95.556	ENSCGRG00000010423	Snrpb	75	78.698	Cricetulus_griseus_crigri
ENSXMAG00000028767	snrpb	58	98.519	ENSCSEG00000020328	snrpb	89	67.136	Cynoglossus_semilaevis
ENSXMAG00000028767	snrpb	58	95.556	ENSDNOG00000015545	-	93	65.022	Dasypus_novemcinctus
ENSXMAG00000028767	snrpb	58	95.556	ENSDORG00000029558	Snrpb	90	67.476	Dipodomys_ordii
ENSXMAG00000028767	snrpb	57	70.149	FBgn0262601	SmB	74	65.563	Drosophila_melanogaster
ENSXMAG00000028767	snrpb	58	88.148	ENSEBUG00000007467	SNRPB	56	88.148	Eptatretus_burgeri
ENSXMAG00000028767	snrpb	58	94.815	ENSEASG00005012991	SNRPB	74	78.363	Equus_asinus_asinus
ENSXMAG00000028767	snrpb	58	95.556	ENSECAG00000011944	SNRPB	74	78.947	Equus_caballus
ENSXMAG00000028767	snrpb	58	95.556	ENSEEUG00000015568	SNRPB	60	78.947	Erinaceus_europaeus
ENSXMAG00000028767	snrpb	58	100.000	ENSELUG00000014564	snrpb	64	95.172	Esox_lucius
ENSXMAG00000028767	snrpb	58	95.556	ENSFCAG00000034090	-	74	78.947	Felis_catus
ENSXMAG00000028767	snrpb	57	97.744	ENSFALG00000004866	SNRPB	73	80.473	Ficedula_albicollis
ENSXMAG00000028767	snrpb	58	95.556	ENSFDAG00000009937	SNRPB	92	65.022	Fukomys_damarensis
ENSXMAG00000028767	snrpb	58	97.778	ENSGALG00000035421	SNRPN	71	80.702	Gallus_gallus
ENSXMAG00000028767	snrpb	58	99.259	ENSGAFG00000019558	snrpb	63	94.444	Gambusia_affinis
ENSXMAG00000028767	snrpb	58	100.000	ENSGACG00000003262	snrpb	61	95.139	Gasterosteus_aculeatus
ENSXMAG00000028767	snrpb	58	97.778	ENSGAGG00000001308	SNRPB	71	80.702	Gopherus_agassizii
ENSXMAG00000028767	snrpb	58	95.556	ENSGGOG00000016138	SNRPB	74	78.947	Gorilla_gorilla
ENSXMAG00000028767	snrpb	58	100.000	ENSHBUG00000008369	snrpb	89	67.742	Haplochromis_burtoni
ENSXMAG00000028767	snrpb	58	95.556	ENSHGLG00000016241	-	74	78.947	Heterocephalus_glaber_female
ENSXMAG00000028767	snrpb	58	85.926	ENSHGLG00000016505	-	81	71.930	Heterocephalus_glaber_female
ENSXMAG00000028767	snrpb	58	85.926	ENSHGLG00100004178	-	81	71.930	Heterocephalus_glaber_male
ENSXMAG00000028767	snrpb	58	95.556	ENSHGLG00100012877	-	93	65.022	Heterocephalus_glaber_male
ENSXMAG00000028767	snrpb	58	100.000	ENSHCOG00000014888	snrpb	89	68.075	Hippocampus_comes
ENSXMAG00000028767	snrpb	58	95.556	ENSSTOG00000027821	-	61	95.556	Ictidomys_tridecemlineatus
ENSXMAG00000028767	snrpb	62	89.583	ENSSTOG00000033664	-	93	64.126	Ictidomys_tridecemlineatus
ENSXMAG00000028767	snrpb	58	95.556	ENSJJAG00000024170	Snrpb	74	78.947	Jaculus_jaculus
ENSXMAG00000028767	snrpb	58	99.259	ENSKMAG00000014494	snrpb	59	94.444	Kryptolebias_marmoratus
ENSXMAG00000028767	snrpb	58	100.000	ENSLBEG00000005678	snrpb	89	68.075	Labrus_bergylta
ENSXMAG00000028767	snrpb	58	98.519	ENSLACG00000011459	SNRPB	78	75.532	Latimeria_chalumnae
ENSXMAG00000028767	snrpb	58	90.370	ENSLAFG00000017588	SNRPB	73	74.854	Loxodonta_africana
ENSXMAG00000028767	snrpb	58	95.556	ENSMFAG00000038756	SNRPB	74	78.947	Macaca_fascicularis
ENSXMAG00000028767	snrpb	58	95.556	ENSMMUG00000010050	SNRPB	74	78.947	Macaca_mulatta
ENSXMAG00000028767	snrpb	58	95.556	ENSMNEG00000027954	SNRPB	74	78.947	Macaca_nemestrina
ENSXMAG00000028767	snrpb	58	95.556	ENSMLEG00000022346	SNRPB	93	65.022	Mandrillus_leucophaeus
ENSXMAG00000028767	snrpb	58	100.000	ENSMAMG00000009294	snrpb	87	67.742	Mastacembelus_armatus
ENSXMAG00000028767	snrpb	58	100.000	ENSMZEG00005011856	snrpb	89	67.742	Maylandia_zebra
ENSXMAG00000028767	snrpb	58	84.444	ENSMICG00000015983	-	71	76.129	Microcebus_murinus
ENSXMAG00000028767	snrpb	58	95.556	ENSMICG00000016519	SNRPB	74	78.947	Microcebus_murinus
ENSXMAG00000028767	snrpb	58	94.815	ENSMOCG00000002892	-	74	78.363	Microtus_ochrogaster
ENSXMAG00000028767	snrpb	57	78.195	ENSMOCG00000021362	-	58	75.362	Microtus_ochrogaster
ENSXMAG00000028767	snrpb	58	100.000	ENSMMOG00000013226	snrpb	62	95.139	Mola_mola
ENSXMAG00000028767	snrpb	58	95.556	MGP_CAROLIEiJ_G0024293	Snrpb	66	97.826	Mus_caroli
ENSXMAG00000028767	snrpb	58	95.556	ENSMUSG00000027404	Snrpb	66	97.826	Mus_musculus
ENSXMAG00000028767	snrpb	58	95.556	MGP_PahariEiJ_G0025738	Snrpb	66	97.826	Mus_pahari
ENSXMAG00000028767	snrpb	58	95.556	MGP_SPRETEiJ_G0025213	Snrpb	65	97.826	Mus_spretus
ENSXMAG00000028767	snrpb	58	95.556	ENSMPUG00000009283	SNRPB	74	78.947	Mustela_putorius_furo
ENSXMAG00000028767	snrpb	58	91.852	ENSMLUG00000016951	SNRPB	71	76.023	Myotis_lucifugus
ENSXMAG00000028767	snrpb	58	95.556	ENSNGAG00000012051	Snrpb	74	78.947	Nannospalax_galili
ENSXMAG00000028767	snrpb	58	99.265	ENSNBRG00000006353	snrpb	52	100.000	Neolamprologus_brichardi
ENSXMAG00000028767	snrpb	58	95.556	ENSNLEG00000029067	SNRPB	93	65.022	Nomascus_leucogenys
ENSXMAG00000028767	snrpb	58	95.556	ENSMEUG00000015625	SNRPB	76	78.947	Notamacropus_eugenii
ENSXMAG00000028767	snrpb	58	88.889	ENSODEG00000016060	-	80	71.579	Octodon_degus
ENSXMAG00000028767	snrpb	58	95.556	ENSODEG00000004305	-	93	61.435	Octodon_degus
ENSXMAG00000028767	snrpb	58	100.000	ENSONIG00000000248	snrpb	89	67.742	Oreochromis_niloticus
ENSXMAG00000028767	snrpb	58	91.111	ENSOCUG00000022423	-	79	81.935	Oryctolagus_cuniculus
ENSXMAG00000028767	snrpb	58	95.556	ENSOCUG00000014042	-	86	67.476	Oryctolagus_cuniculus
ENSXMAG00000028767	snrpb	86	51.818	ENSOCUG00000026813	-	67	58.710	Oryctolagus_cuniculus
ENSXMAG00000028767	snrpb	58	100.000	ENSORLG00000021862	snrpb	60	95.139	Oryzias_latipes
ENSXMAG00000028767	snrpb	58	95.556	ENSOGAG00000016149	SNRPB	93	65.022	Otolemur_garnettii
ENSXMAG00000028767	snrpb	58	95.556	ENSOARG00000006740	SNRPB	74	78.947	Ovis_aries
ENSXMAG00000028767	snrpb	58	95.556	ENSPPAG00000036314	SNRPB	74	78.947	Pan_paniscus
ENSXMAG00000028767	snrpb	58	95.556	ENSPPRG00000003233	-	93	65.022	Panthera_pardus
ENSXMAG00000028767	snrpb	58	95.556	ENSPTIG00000007468	SNRPB	93	65.022	Panthera_tigris_altaica
ENSXMAG00000028767	snrpb	58	95.556	ENSPTRG00000013176	SNRPB	74	78.947	Pan_troglodytes
ENSXMAG00000028767	snrpb	58	95.556	ENSPANG00000020362	SNRPB	93	65.022	Papio_anubis
ENSXMAG00000028767	snrpb	58	97.778	ENSPSIG00000014125	SNRPB	70	80.702	Pelodiscus_sinensis
ENSXMAG00000028767	snrpb	58	97.778	ENSPMGG00000016349	snrpb	62	93.056	Periophthalmus_magnuspinnatus
ENSXMAG00000028767	snrpb	58	95.556	ENSPEMG00000007948	Snrpb	74	78.947	Peromyscus_maniculatus_bairdii
ENSXMAG00000028767	snrpb	58	94.815	ENSPCIG00000004694	SNRPB	93	65.471	Phascolarctos_cinereus
ENSXMAG00000028767	snrpb	74	85.549	ENSPFOG00000011802	snrpb	73	85.549	Poecilia_formosa
ENSXMAG00000028767	snrpb	90	95.714	ENSPLAG00000014130	snrpb	91	95.714	Poecilia_latipinna
ENSXMAG00000028767	snrpb	73	85.882	ENSPREG00000015515	snrpb	74	85.549	Poecilia_reticulata
ENSXMAG00000028767	snrpb	58	95.556	ENSPPYG00000010841	SNRPB	74	78.947	Pongo_abelii
ENSXMAG00000028767	snrpb	58	95.556	ENSPCOG00000013686	SNRPB	74	78.947	Propithecus_coquereli
ENSXMAG00000028767	snrpb	58	94.074	ENSPVAG00000017013	SNRPB	60	77.778	Pteropus_vampyrus
ENSXMAG00000028767	snrpb	58	100.000	ENSPNYG00000014788	snrpb	89	67.742	Pundamilia_nyererei
ENSXMAG00000028767	snrpb	58	98.529	ENSPNAG00000016126	snrpb	60	93.793	Pygocentrus_nattereri
ENSXMAG00000028767	snrpb	58	95.556	ENSRNOG00000006961	Snrpb	65	97.826	Rattus_norvegicus
ENSXMAG00000028767	snrpb	58	95.556	ENSRBIG00000040505	SNRPB	74	78.947	Rhinopithecus_bieti
ENSXMAG00000028767	snrpb	58	95.556	ENSRROG00000036094	SNRPB	93	65.022	Rhinopithecus_roxellana
ENSXMAG00000028767	snrpb	58	95.556	ENSSBOG00000027310	SNRPB	93	65.022	Saimiri_boliviensis_boliviensis
ENSXMAG00000028767	snrpb	58	96.296	ENSSHAG00000010394	SNRPB	93	66.368	Sarcophilus_harrisii
ENSXMAG00000028767	snrpb	58	97.778	ENSSFOG00015002870	snrpb	90	67.593	Scleropages_formosus
ENSXMAG00000028767	snrpb	58	100.000	ENSSMAG00000006766	snrpb	89	65.753	Scophthalmus_maximus
ENSXMAG00000028767	snrpb	58	100.000	ENSSDUG00000018539	snrpb	89	67.742	Seriola_dumerili
ENSXMAG00000028767	snrpb	58	100.000	ENSSLDG00000022391	snrpb	89	67.742	Seriola_lalandi_dorsalis
ENSXMAG00000028767	snrpb	58	76.296	ENSSARG00000003084	SNRPB	73	63.743	Sorex_araneus
ENSXMAG00000028767	snrpb	58	97.778	ENSSPUG00000015659	SNRPB	72	80.702	Sphenodon_punctatus
ENSXMAG00000028767	snrpb	58	100.000	ENSSPAG00000021992	snrpb	89	67.742	Stegastes_partitus
ENSXMAG00000028767	snrpb	62	68.056	ENSSSCG00000011966	-	63	62.581	Sus_scrofa
ENSXMAG00000028767	snrpb	58	95.556	ENSSSCG00000040857	-	74	78.947	Sus_scrofa
ENSXMAG00000028767	snrpb	58	97.037	ENSTGUG00000005684	SNRPB	56	97.037	Taeniopygia_guttata
ENSXMAG00000028767	snrpb	58	100.000	ENSTRUG00000023094	snrpb	73	82.456	Takifugu_rubripes
ENSXMAG00000028767	snrpb	58	100.000	ENSTNIG00000002991	snrpb	71	82.456	Tetraodon_nigroviridis
ENSXMAG00000028767	snrpb	58	95.556	ENSUAMG00000005984	-	82	78.947	Ursus_americanus
ENSXMAG00000028767	snrpb	58	95.556	ENSUMAG00000002123	-	62	95.556	Ursus_maritimus
ENSXMAG00000028767	snrpb	58	94.815	ENSVVUG00000025654	-	93	64.574	Vulpes_vulpes
ENSXMAG00000028767	snrpb	62	71.528	ENSVVUG00000010086	-	68	64.815	Vulpes_vulpes
ENSXMAG00000028767	snrpb	58	98.519	ENSXETG00000027266	snrpb	72	81.287	Xenopus_tropicalis