EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000028779 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Minus strand
Length: 17548 bases
Position: chr14:6351712-6369259
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000041353	MMR_HSR1	PF01926.23	5.6e-09	1	1
ENSXMAP00000038832	MMR_HSR1	PF01926.23	6.2e-09	1	1
ENSXMAP00000031236	MMR_HSR1	PF01926.23	6.3e-09	1	1
ENSXMAP00000034809	MMR_HSR1	PF01926.23	6.3e-09	1	1
ENSXMAP00000030466	MMR_HSR1	PF01926.23	9.6e-09	1	1
ENSXMAP00000024951	MMR_HSR1	PF01926.23	1e-08	1	1
ENSXMAP00000027312	MMR_HSR1	PF01926.23	1e-08	1	1
ENSXMAP00000031757	MMR_HSR1	PF01926.23	1.1e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000037780	-	4488	-	ENSXMAP00000024951	1014 (aa)	-	-
ENSXMAT00000021722	-	4275	-	ENSXMAP00000030466	982 (aa)	-	-
ENSXMAT00000034631	-	4733	-	ENSXMAP00000027312	1014 (aa)	-	-
ENSXMAT00000027290	-	4733	-	ENSXMAP00000031757	1014 (aa)	-	-
ENSXMAT00000034587	-	4028	-	ENSXMAP00000038832	779 (aa)	-	-
ENSXMAT00000035183	-	4046	-	ENSXMAP00000031236	785 (aa)	-	-
ENSXMAT00000037360	-	3588	-	ENSXMAP00000041353	753 (aa)	-	-
ENSXMAT00000030601	-	4046	-	ENSXMAP00000034809	785 (aa)	-	-

Gene Model

Click here to download ENSXMAG00000028779's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000028779's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000028779	-	73	54.710	ENSAPOG00000000444	-	91	55.331	Acanthochromis_polyacanthus
ENSXMAG00000028779	-	99	60.680	ENSATEG00000011040	-	96	52.439	Anabas_testudineus
ENSXMAG00000028779	-	70	52.809	ENSACLG00000001777	-	99	52.533	Astatotilapia_calliptera
ENSXMAG00000028779	-	92	51.183	ENSACLG00000001833	-	98	54.302	Astatotilapia_calliptera
ENSXMAG00000028779	-	60	55.482	ENSACLG00000001800	-	99	54.230	Astatotilapia_calliptera
ENSXMAG00000028779	-	50	43.860	ENSCSEG00000020077	-	77	40.056	Cynoglossus_semilaevis
ENSXMAG00000028779	-	99	67.384	ENSCVAG00000003284	-	99	67.384	Cyprinodon_variegatus
ENSXMAG00000028779	-	99	59.227	ENSFHEG00000010614	-	100	65.829	Fundulus_heteroclitus
ENSXMAG00000028779	-	78	64.310	ENSFHEG00000010603	-	99	63.805	Fundulus_heteroclitus
ENSXMAG00000028779	-	50	68.930	ENSFHEG00000010623	-	100	69.713	Fundulus_heteroclitus
ENSXMAG00000028779	-	81	88.110	ENSGAFG00000006087	-	100	88.110	Gambusia_affinis
ENSXMAG00000028779	-	89	55.556	ENSHBUG00000015375	-	98	56.214	Haplochromis_burtoni
ENSXMAG00000028779	-	89	51.400	ENSHBUG00000018072	-	99	50.780	Haplochromis_burtoni
ENSXMAG00000028779	-	99	53.987	ENSKMAG00000011735	-	99	57.825	Kryptolebias_marmoratus
ENSXMAG00000028779	-	99	53.503	ENSLBEG00000015796	-	98	56.637	Labrus_bergylta
ENSXMAG00000028779	-	57	58.491	ENSMAMG00000013262	-	95	55.172	Mastacembelus_armatus
ENSXMAG00000028779	-	86	52.734	ENSMAMG00000013245	-	73	51.504	Mastacembelus_armatus
ENSXMAG00000028779	-	73	54.529	ENSMZEG00005020584	-	99	55.072	Maylandia_zebra
ENSXMAG00000028779	-	59	55.804	ENSNBRG00000005577	-	98	55.580	Neolamprologus_brichardi
ENSXMAG00000028779	-	61	56.369	ENSORLG00000026065	-	91	65.746	Oryzias_latipes
ENSXMAG00000028779	-	80	47.244	ENSORLG00020017362	-	90	47.222	Oryzias_latipes_hni
ENSXMAG00000028779	-	61	56.720	ENSORLG00020017391	-	91	55.615	Oryzias_latipes_hni
ENSXMAG00000028779	-	51	56.701	ENSORLG00015018216	-	94	57.215	Oryzias_latipes_hsok
ENSXMAG00000028779	-	62	54.856	ENSORLG00015018247	-	98	55.340	Oryzias_latipes_hsok
ENSXMAG00000028779	-	82	51.073	ENSOMEG00000018412	-	97	51.073	Oryzias_melastigma
ENSXMAG00000028779	-	97	45.590	ENSOMEG00000018335	-	100	48.433	Oryzias_melastigma
ENSXMAG00000028779	-	71	83.022	ENSPLAG00000023261	-	100	83.396	Poecilia_latipinna
ENSXMAG00000028779	-	50	81.667	ENSPLAG00000023243	-	95	81.667	Poecilia_latipinna
ENSXMAG00000028779	-	81	84.125	ENSPMEG00000009099	-	100	84.125	Poecilia_mexicana
ENSXMAG00000028779	-	100	81.760	ENSPMEG00000009067	-	100	81.760	Poecilia_mexicana
ENSXMAG00000028779	-	51	45.098	ENSPREG00000008166	-	91	45.631	Poecilia_reticulata
ENSXMAG00000028779	-	96	79.480	ENSPREG00000006740	-	97	80.276	Poecilia_reticulata
ENSXMAG00000028779	-	95	48.196	ENSSMAG00000003569	-	75	49.294	Scophthalmus_maximus
ENSXMAG00000028779	-	99	54.511	ENSSDUG00000001451	-	87	53.895	Seriola_dumerili