EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000028889 (Gene tree)
Gene ID: 102221989
Gene Symbol: rab5aa
Alias: fj38g08|hm:zehn1144|rab5a|wu:fj38g08
Full Name: ras-related protein Rab-5A
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Minus strand
Length: 9330 bases
Position: chr13:24004143-24013472
Accession: 102221989
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000028154	MMR_HSR1	PF01926.23	0.00012	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000029241	-	4177	XM_005797343	ENSXMAP00000028154	216 (aa)	XP_005797400	UPI00029394CC

Gene Model

Click here to download ENSXMAG00000028889's gene model file

Pathways

Pathway ID	Pathway Name	Source
xma04144	Endocytosis	KEGG
xma04145	Phagosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000028889's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000028889	rab5aa	99	93.953	ENSG00000144566	RAB5A	99	93.953	Homo_sapiens
ENSXMAG00000028889	rab5aa	99	97.209	ENSAPOG00000021391	rab5aa	99	97.209	Acanthochromis_polyacanthus
ENSXMAG00000028889	rab5aa	99	93.488	ENSAMEG00000000954	RAB5A	99	93.488	Ailuropoda_melanoleuca
ENSXMAG00000028889	rab5aa	99	96.744	ENSACIG00000019251	rab5aa	99	96.744	Amphilophus_citrinellus
ENSXMAG00000028889	rab5aa	99	97.209	ENSAOCG00000000090	rab5aa	99	97.209	Amphiprion_ocellaris
ENSXMAG00000028889	rab5aa	99	97.209	ENSAPEG00000013376	rab5aa	99	97.209	Amphiprion_percula
ENSXMAG00000028889	rab5aa	99	96.744	ENSATEG00000014748	rab5aa	99	96.744	Anabas_testudineus
ENSXMAG00000028889	rab5aa	99	93.023	ENSACAG00000000017	RAB5A	99	93.023	Anolis_carolinensis
ENSXMAG00000028889	rab5aa	99	93.488	ENSANAG00000025120	RAB5A	99	93.488	Aotus_nancymaae
ENSXMAG00000028889	rab5aa	99	96.744	ENSACLG00000018066	rab5aa	99	96.744	Astatotilapia_calliptera
ENSXMAG00000028889	rab5aa	99	93.056	ENSAMXG00000035919	rab5ab	99	93.056	Astyanax_mexicanus
ENSXMAG00000028889	rab5aa	99	95.814	ENSAMXG00000036179	rab5aa	99	95.814	Astyanax_mexicanus
ENSXMAG00000028889	rab5aa	99	93.488	ENSBTAG00000046385	RAB5A	99	93.488	Bos_taurus
ENSXMAG00000028889	rab5aa	99	93.488	ENSCJAG00000048394	RAB5A	99	93.488	Callithrix_jacchus
ENSXMAG00000028889	rab5aa	99	93.488	ENSCAFG00000005814	RAB5A	99	93.488	Canis_familiaris
ENSXMAG00000028889	rab5aa	99	93.488	ENSCAFG00020027287	RAB5A	99	93.488	Canis_lupus_dingo
ENSXMAG00000028889	rab5aa	99	93.023	ENSCHIG00000025419	-	99	93.023	Capra_hircus
ENSXMAG00000028889	rab5aa	99	93.953	ENSTSYG00000007642	-	99	93.953	Carlito_syrichta
ENSXMAG00000028889	rab5aa	99	88.372	ENSTSYG00000030238	-	99	88.372	Carlito_syrichta
ENSXMAG00000028889	rab5aa	99	93.488	ENSCCAG00000022405	RAB5A	99	93.488	Cebus_capucinus
ENSXMAG00000028889	rab5aa	99	93.488	ENSCATG00000033588	-	99	93.488	Cercocebus_atys
ENSXMAG00000028889	rab5aa	99	93.023	ENSCLAG00000006053	-	99	93.023	Chinchilla_lanigera
ENSXMAG00000028889	rab5aa	99	93.488	ENSCSAG00000009831	RAB5A	99	93.488	Chlorocebus_sabaeus
ENSXMAG00000028889	rab5aa	99	93.023	ENSCPBG00000022559	RAB5A	99	93.023	Chrysemys_picta_bellii
ENSXMAG00000028889	rab5aa	99	93.488	ENSCANG00000043514	RAB5A	99	93.488	Colobus_angolensis_palliatus
ENSXMAG00000028889	rab5aa	99	94.419	ENSCGRG00001020018	-	99	94.419	Cricetulus_griseus_chok1gshd
ENSXMAG00000028889	rab5aa	99	94.419	ENSCGRG00000002786	-	99	94.419	Cricetulus_griseus_crigri
ENSXMAG00000028889	rab5aa	100	98.611	ENSCVAG00000008239	rab5aa	100	98.611	Cyprinodon_variegatus
ENSXMAG00000028889	rab5aa	99	95.814	ENSDARG00000018602	rab5aa	99	95.814	Danio_rerio
ENSXMAG00000028889	rab5aa	100	93.519	ENSDARG00000007257	rab5ab	100	93.519	Danio_rerio
ENSXMAG00000028889	rab5aa	99	93.023	ENSDNOG00000038467	RAB5A	99	93.023	Dasypus_novemcinctus
ENSXMAG00000028889	rab5aa	99	93.488	ENSDORG00000024958	-	99	93.488	Dipodomys_ordii
ENSXMAG00000028889	rab5aa	99	93.488	ENSEASG00005005818	RAB5A	99	93.488	Equus_asinus_asinus
ENSXMAG00000028889	rab5aa	99	93.488	ENSECAG00000019062	RAB5A	99	93.488	Equus_caballus
ENSXMAG00000028889	rab5aa	99	93.953	ENSEEUG00000009044	RAB5A	99	93.953	Erinaceus_europaeus
ENSXMAG00000028889	rab5aa	100	95.370	ENSELUG00000013436	rab5ab	100	95.370	Esox_lucius
ENSXMAG00000028889	rab5aa	99	97.674	ENSELUG00000006462	rab5aa	99	97.674	Esox_lucius
ENSXMAG00000028889	rab5aa	99	93.488	ENSFCAG00000039795	-	99	93.488	Felis_catus
ENSXMAG00000028889	rab5aa	99	92.558	ENSFALG00000009239	RAB5A	99	92.558	Ficedula_albicollis
ENSXMAG00000028889	rab5aa	99	92.558	ENSFDAG00000005631	-	99	92.558	Fukomys_damarensis
ENSXMAG00000028889	rab5aa	100	98.148	ENSFHEG00000014070	rab5aa	100	98.148	Fundulus_heteroclitus
ENSXMAG00000028889	rab5aa	100	94.444	ENSGMOG00000002868	rab5aa	100	94.444	Gadus_morhua
ENSXMAG00000028889	rab5aa	84	94.475	ENSGMOG00000007127	RAB5A	99	94.475	Gadus_morhua
ENSXMAG00000028889	rab5aa	99	92.558	ENSGALG00000011272	RAB5A	99	92.558	Gallus_gallus
ENSXMAG00000028889	rab5aa	100	99.537	ENSGAFG00000011619	rab5aa	100	99.537	Gambusia_affinis
ENSXMAG00000028889	rab5aa	99	96.279	ENSGACG00000004997	rab5aa	99	96.279	Gasterosteus_aculeatus
ENSXMAG00000028889	rab5aa	99	93.488	ENSGAGG00000005319	RAB5A	99	93.488	Gopherus_agassizii
ENSXMAG00000028889	rab5aa	99	93.953	ENSGGOG00000015981	RAB5A	99	93.953	Gorilla_gorilla
ENSXMAG00000028889	rab5aa	99	96.744	ENSHBUG00000003752	rab5aa	99	96.744	Haplochromis_burtoni
ENSXMAG00000028889	rab5aa	96	95.192	ENSHGLG00000006357	-	99	95.192	Heterocephalus_glaber_female
ENSXMAG00000028889	rab5aa	97	86.667	ENSHGLG00000017749	-	95	86.667	Heterocephalus_glaber_female
ENSXMAG00000028889	rab5aa	97	86.667	ENSHGLG00100008816	-	95	86.667	Heterocephalus_glaber_male
ENSXMAG00000028889	rab5aa	99	93.488	ENSHGLG00100007553	RAB5A	99	93.488	Heterocephalus_glaber_male
ENSXMAG00000028889	rab5aa	99	94.444	ENSIPUG00000023392	rab5a	99	94.444	Ictalurus_punctatus
ENSXMAG00000028889	rab5aa	99	93.488	ENSSTOG00000026229	RAB5A	99	93.488	Ictidomys_tridecemlineatus
ENSXMAG00000028889	rab5aa	99	92.558	ENSJJAG00000020190	Rab5a	99	92.558	Jaculus_jaculus
ENSXMAG00000028889	rab5aa	99	96.744	ENSKMAG00000005111	rab5aa	99	96.744	Kryptolebias_marmoratus
ENSXMAG00000028889	rab5aa	97	97.129	ENSLBEG00000002516	rab5aa	92	97.129	Labrus_bergylta
ENSXMAG00000028889	rab5aa	99	93.488	ENSLACG00000004663	RAB5A	99	93.488	Latimeria_chalumnae
ENSXMAG00000028889	rab5aa	99	94.419	ENSLOCG00000006591	rab5ab	99	94.419	Lepisosteus_oculatus
ENSXMAG00000028889	rab5aa	99	93.488	ENSLAFG00000008321	RAB5A	99	93.488	Loxodonta_africana
ENSXMAG00000028889	rab5aa	99	93.488	ENSMFAG00000002326	RAB5A	99	93.488	Macaca_fascicularis
ENSXMAG00000028889	rab5aa	69	92.000	ENSMMUG00000032398	-	87	92.000	Macaca_mulatta
ENSXMAG00000028889	rab5aa	83	96.667	ENSMMUG00000006992	RAB5A	91	96.667	Macaca_mulatta
ENSXMAG00000028889	rab5aa	99	93.488	ENSMNEG00000039149	-	99	93.488	Macaca_nemestrina
ENSXMAG00000028889	rab5aa	99	93.488	ENSMLEG00000028944	RAB5A	99	93.488	Mandrillus_leucophaeus
ENSXMAG00000028889	rab5aa	99	96.744	ENSMAMG00000012573	rab5aa	99	96.744	Mastacembelus_armatus
ENSXMAG00000028889	rab5aa	99	96.744	ENSMZEG00005005205	rab5aa	99	96.744	Maylandia_zebra
ENSXMAG00000028889	rab5aa	99	93.023	ENSMGAG00000010961	RAB5A	99	93.023	Meleagris_gallopavo
ENSXMAG00000028889	rab5aa	99	94.419	ENSMAUG00000011242	-	99	94.419	Mesocricetus_auratus
ENSXMAG00000028889	rab5aa	99	93.488	ENSMICG00000049130	RAB5A	99	93.488	Microcebus_murinus
ENSXMAG00000028889	rab5aa	99	93.953	ENSMOCG00000009706	Rab5a	99	93.953	Microtus_ochrogaster
ENSXMAG00000028889	rab5aa	99	97.674	ENSMMOG00000019135	rab5aa	99	97.674	Mola_mola
ENSXMAG00000028889	rab5aa	99	93.023	ENSMODG00000014793	RAB5A	97	96.111	Monodelphis_domestica
ENSXMAG00000028889	rab5aa	99	94.419	ENSMALG00000014929	rab5aa	99	94.419	Monopterus_albus
ENSXMAG00000028889	rab5aa	99	94.419	MGP_CAROLIEiJ_G0021741	Rab5a	98	96.667	Mus_caroli
ENSXMAG00000028889	rab5aa	99	94.419	ENSMUSG00000017831	Rab5a	99	94.419	Mus_musculus
ENSXMAG00000028889	rab5aa	87	93.583	MGP_PahariEiJ_G0020730	Rab5a	99	93.583	Mus_pahari
ENSXMAG00000028889	rab5aa	99	93.488	ENSMPUG00000013147	RAB5A	99	93.488	Mustela_putorius_furo
ENSXMAG00000028889	rab5aa	99	93.488	ENSMLUG00000011716	RAB5A	99	93.488	Myotis_lucifugus
ENSXMAG00000028889	rab5aa	99	94.419	ENSNGAG00000021245	-	99	94.419	Nannospalax_galili
ENSXMAG00000028889	rab5aa	99	96.744	ENSNBRG00000011763	rab5aa	99	96.744	Neolamprologus_brichardi
ENSXMAG00000028889	rab5aa	99	93.953	ENSNLEG00000003434	RAB5A	99	93.953	Nomascus_leucogenys
ENSXMAG00000028889	rab5aa	82	96.629	ENSOPRG00000011278	RAB5A	100	96.629	Ochotona_princeps
ENSXMAG00000028889	rab5aa	68	97.279	ENSODEG00000000290	-	99	97.279	Octodon_degus
ENSXMAG00000028889	rab5aa	87	86.842	ENSODEG00000019065	-	99	86.842	Octodon_degus
ENSXMAG00000028889	rab5aa	99	96.744	ENSONIG00000002425	rab5aa	99	96.744	Oreochromis_niloticus
ENSXMAG00000028889	rab5aa	100	91.667	ENSOANG00000004989	RAB5A	98	91.667	Ornithorhynchus_anatinus
ENSXMAG00000028889	rab5aa	99	93.023	ENSOCUG00000012200	RAB5A	99	93.023	Oryctolagus_cuniculus
ENSXMAG00000028889	rab5aa	99	96.279	ENSORLG00000012261	rab5aa	99	96.279	Oryzias_latipes
ENSXMAG00000028889	rab5aa	99	96.279	ENSORLG00020020922	rab5aa	99	96.279	Oryzias_latipes_hni
ENSXMAG00000028889	rab5aa	99	96.279	ENSORLG00015012854	rab5aa	99	96.279	Oryzias_latipes_hsok
ENSXMAG00000028889	rab5aa	99	93.488	ENSORLG00015017737	rab5ab	99	93.488	Oryzias_latipes_hsok
ENSXMAG00000028889	rab5aa	99	97.209	ENSOMEG00000010692	rab5aa	99	97.209	Oryzias_melastigma
ENSXMAG00000028889	rab5aa	99	93.023	ENSOARG00000015722	RAB5A	99	93.023	Ovis_aries
ENSXMAG00000028889	rab5aa	99	93.519	ENSPPAG00000041763	RAB5A	99	93.519	Pan_paniscus
ENSXMAG00000028889	rab5aa	99	93.488	ENSPPRG00000001655	-	99	93.488	Panthera_pardus
ENSXMAG00000028889	rab5aa	99	93.488	ENSPTIG00000021685	RAB5A	99	93.488	Panthera_tigris_altaica
ENSXMAG00000028889	rab5aa	99	93.519	ENSPTRG00000014682	RAB5A	99	93.519	Pan_troglodytes
ENSXMAG00000028889	rab5aa	99	93.488	ENSPANG00000001328	RAB5A	99	93.488	Papio_anubis
ENSXMAG00000028889	rab5aa	99	89.302	ENSPKIG00000010291	RAB5A	99	89.302	Paramormyrops_kingsleyae
ENSXMAG00000028889	rab5aa	99	96.744	ENSPKIG00000009578	rab5ab	99	96.744	Paramormyrops_kingsleyae
ENSXMAG00000028889	rab5aa	99	93.023	ENSPSIG00000007157	RAB5A	99	93.023	Pelodiscus_sinensis
ENSXMAG00000028889	rab5aa	99	96.279	ENSPMGG00000001915	rab5aa	99	96.279	Periophthalmus_magnuspinnatus
ENSXMAG00000028889	rab5aa	99	93.023	ENSPCIG00000018321	RAB5A	99	93.023	Phascolarctos_cinereus
ENSXMAG00000028889	rab5aa	100	100.000	ENSPFOG00000011263	rab5aa	100	100.000	Poecilia_formosa
ENSXMAG00000028889	rab5aa	100	100.000	ENSPLAG00000017838	rab5aa	100	100.000	Poecilia_latipinna
ENSXMAG00000028889	rab5aa	100	100.000	ENSPMEG00000007238	rab5aa	100	100.000	Poecilia_mexicana
ENSXMAG00000028889	rab5aa	99	93.953	ENSPPYG00000014074	RAB5A	99	93.953	Pongo_abelii
ENSXMAG00000028889	rab5aa	99	93.488	ENSPCOG00000013289	RAB5A	99	93.488	Propithecus_coquereli
ENSXMAG00000028889	rab5aa	99	93.023	ENSPVAG00000006730	RAB5A	99	93.023	Pteropus_vampyrus
ENSXMAG00000028889	rab5aa	99	96.744	ENSPNYG00000010612	rab5aa	99	96.744	Pundamilia_nyererei
ENSXMAG00000028889	rab5aa	99	93.056	ENSPNAG00000009496	rab5ab	99	93.056	Pygocentrus_nattereri
ENSXMAG00000028889	rab5aa	99	95.814	ENSPNAG00000023223	rab5aa	99	95.814	Pygocentrus_nattereri
ENSXMAG00000028889	rab5aa	99	93.488	ENSRBIG00000036122	RAB5A	99	93.488	Rhinopithecus_bieti
ENSXMAG00000028889	rab5aa	99	93.488	ENSRROG00000037687	RAB5A	99	93.488	Rhinopithecus_roxellana
ENSXMAG00000028889	rab5aa	99	92.593	ENSSHAG00000006787	RAB5A	99	92.593	Sarcophilus_harrisii
ENSXMAG00000028889	rab5aa	99	93.953	ENSSFOG00015021115	-	99	93.953	Scleropages_formosus
ENSXMAG00000028889	rab5aa	99	96.744	ENSSFOG00015014517	rab5a	99	96.744	Scleropages_formosus
ENSXMAG00000028889	rab5aa	99	97.674	ENSSMAG00000009229	rab5aa	99	97.674	Scophthalmus_maximus
ENSXMAG00000028889	rab5aa	99	97.209	ENSSDUG00000009835	rab5aa	99	97.209	Seriola_dumerili
ENSXMAG00000028889	rab5aa	99	97.209	ENSSLDG00000011069	rab5aa	99	97.209	Seriola_lalandi_dorsalis
ENSXMAG00000028889	rab5aa	87	96.809	ENSSPUG00000001173	RAB5A	96	96.809	Sphenodon_punctatus
ENSXMAG00000028889	rab5aa	99	97.209	ENSSPAG00000015678	rab5aa	99	97.209	Stegastes_partitus
ENSXMAG00000028889	rab5aa	99	92.558	ENSSSCG00000037653	RAB5A	99	92.558	Sus_scrofa
ENSXMAG00000028889	rab5aa	99	92.558	ENSTGUG00000003236	RAB5A	99	92.558	Taeniopygia_guttata
ENSXMAG00000028889	rab5aa	100	97.222	ENSTRUG00000024368	rab5aa	100	97.222	Takifugu_rubripes
ENSXMAG00000028889	rab5aa	99	95.814	ENSTNIG00000009196	rab5aa	99	95.814	Tetraodon_nigroviridis
ENSXMAG00000028889	rab5aa	99	93.488	ENSTTRG00000001374	RAB5A	99	93.488	Tursiops_truncatus
ENSXMAG00000028889	rab5aa	99	87.773	ENSUAMG00000027471	RAB5A	99	95.109	Ursus_americanus
ENSXMAG00000028889	rab5aa	99	93.488	ENSUMAG00000018295	RAB5A	99	93.488	Ursus_maritimus
ENSXMAG00000028889	rab5aa	99	93.488	ENSVVUG00000000489	RAB5A	99	93.488	Vulpes_vulpes
ENSXMAG00000028889	rab5aa	99	93.488	ENSXETG00000002305	rab5a	99	93.488	Xenopus_tropicalis
ENSXMAG00000028889	rab5aa	100	99.537	ENSXCOG00000020121	rab5aa	100	99.537	Xiphophorus_couchianus