EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000029068 (Gene tree)
Gene ID: 102221988
Gene Symbol: sf3a2
Alias: zgc:56097|zgc:77448
Full Name: splicing factor 3a subunit 2
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Minus strand
Length: 4116 bases
Position: chr6:12037111-12041226
Accession: 102221988
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000024438	zf-met	PF12874.7	4.9e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000038632	-	1073	XM_014475978	ENSXMAP00000024438	293 (aa)	XP_014331464	UPI000C6E685E

Gene Model

Click here to download ENSXMAG00000029068's gene model file

Pathways

Pathway ID	Pathway Name	Source
xma03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000029068's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000029068	sf3a2	74	95.370	ENSG00000104897	SF3A2	100	96.296	Homo_sapiens
ENSXMAG00000029068	sf3a2	83	94.650	ENSAPOG00000003916	sf3a2	99	93.220	Acanthochromis_polyacanthus
ENSXMAG00000029068	sf3a2	82	96.653	ENSACIG00000018153	sf3a2	81	96.653	Amphilophus_citrinellus
ENSXMAG00000029068	sf3a2	83	95.062	ENSAOCG00000015960	sf3a2	99	93.559	Amphiprion_ocellaris
ENSXMAG00000029068	sf3a2	83	95.062	ENSAPEG00000012336	sf3a2	99	93.559	Amphiprion_percula
ENSXMAG00000029068	sf3a2	83	95.062	ENSATEG00000015449	sf3a2	90	94.737	Anabas_testudineus
ENSXMAG00000029068	sf3a2	63	95.135	ENSANAG00000034031	-	89	95.135	Aotus_nancymaae
ENSXMAG00000029068	sf3a2	88	93.050	ENSACLG00000002356	sf3a2	81	95.397	Astatotilapia_calliptera
ENSXMAG00000029068	sf3a2	84	92.308	ENSAMXG00000032428	sf3a2	80	93.361	Astyanax_mexicanus
ENSXMAG00000029068	sf3a2	75	79.545	WBGene00008683	repo-1	99	79.545	Caenorhabditis_elegans
ENSXMAG00000029068	sf3a2	62	96.154	ENSCAPG00000003402	-	90	96.154	Cavia_aperea
ENSXMAG00000029068	sf3a2	74	95.370	ENSCCAG00000009812	SF3A2	87	95.676	Cebus_capucinus
ENSXMAG00000029068	sf3a2	74	95.370	ENSCPBG00000018569	SF3A2	71	92.411	Chrysemys_picta_bellii
ENSXMAG00000029068	sf3a2	83	79.835	ENSCING00000003319	zf(matrin)-2	62	86.977	Ciona_intestinalis
ENSXMAG00000029068	sf3a2	73	86.047	ENSCSAVG00000007862	-	57	86.047	Ciona_savignyi
ENSXMAG00000029068	sf3a2	74	95.370	ENSCGRG00000011089	Sf3a2	94	96.154	Cricetulus_griseus_crigri
ENSXMAG00000029068	sf3a2	89	90.840	ENSCSEG00000014308	sf3a2	85	93.333	Cynoglossus_semilaevis
ENSXMAG00000029068	sf3a2	88	95.367	ENSCVAG00000021349	sf3a2	82	96.266	Cyprinodon_variegatus
ENSXMAG00000029068	sf3a2	83	92.181	ENSDARG00000021107	sf3a2	81	95.536	Danio_rerio
ENSXMAG00000029068	sf3a2	74	83.105	FBgn0036314	Sf3a2	83	83.105	Drosophila_melanogaster
ENSXMAG00000029068	sf3a2	82	92.946	ENSELUG00000008471	sf3a2	87	91.353	Esox_lucius
ENSXMAG00000029068	sf3a2	64	96.257	ENSFALG00000013785	-	62	83.613	Ficedula_albicollis
ENSXMAG00000029068	sf3a2	62	96.154	ENSFDAG00000020911	-	93	96.154	Fukomys_damarensis
ENSXMAG00000029068	sf3a2	88	97.683	ENSFHEG00000002392	sf3a2	90	97.368	Fundulus_heteroclitus
ENSXMAG00000029068	sf3a2	82	95.021	ENSGMOG00000012186	sf3a2	88	93.233	Gadus_morhua
ENSXMAG00000029068	sf3a2	74	96.296	ENSGALG00000021679	SF3A2	71	93.304	Gallus_gallus
ENSXMAG00000029068	sf3a2	100	97.966	ENSGAFG00000008478	sf3a2	100	97.966	Gambusia_affinis
ENSXMAG00000029068	sf3a2	83	95.082	ENSGACG00000015255	sf3a2	83	95.436	Gasterosteus_aculeatus
ENSXMAG00000029068	sf3a2	58	95.294	ENSGAGG00000008500	SF3A2	66	91.573	Gopherus_agassizii
ENSXMAG00000029068	sf3a2	88	93.050	ENSHBUG00000021796	sf3a2	81	95.397	Haplochromis_burtoni
ENSXMAG00000029068	sf3a2	74	95.370	ENSHGLG00000015102	SF3A2	88	96.175	Heterocephalus_glaber_female
ENSXMAG00000029068	sf3a2	74	95.370	ENSHGLG00100000418	SF3A2	88	96.175	Heterocephalus_glaber_male
ENSXMAG00000029068	sf3a2	91	89.850	ENSHCOG00000001223	sf3a2	83	93.750	Hippocampus_comes
ENSXMAG00000029068	sf3a2	93	85.000	ENSIPUG00000019071	sf3a2	94	85.000	Ictalurus_punctatus
ENSXMAG00000029068	sf3a2	74	95.370	ENSSTOG00000007495	SF3A2	90	88.525	Ictidomys_tridecemlineatus
ENSXMAG00000029068	sf3a2	74	95.370	ENSJJAG00000010635	Sf3a2	94	96.154	Jaculus_jaculus
ENSXMAG00000029068	sf3a2	85	95.582	ENSKMAG00000006295	sf3a2	90	95.113	Kryptolebias_marmoratus
ENSXMAG00000029068	sf3a2	88	94.595	ENSLBEG00000000677	sf3a2	90	94.737	Labrus_bergylta
ENSXMAG00000029068	sf3a2	74	95.833	ENSLACG00000008744	SF3A2	72	92.857	Latimeria_chalumnae
ENSXMAG00000029068	sf3a2	79	94.372	ENSLOCG00000005835	sf3a2	77	93.724	Lepisosteus_oculatus
ENSXMAG00000029068	sf3a2	83	94.239	ENSMAMG00000009881	sf3a2	90	93.985	Mastacembelus_armatus
ENSXMAG00000029068	sf3a2	88	93.050	ENSMZEG00005025609	sf3a2	81	95.397	Maylandia_zebra
ENSXMAG00000029068	sf3a2	74	96.296	ENSMGAG00000001950	SF3A2	71	93.304	Meleagris_gallopavo
ENSXMAG00000029068	sf3a2	62	96.154	ENSMAUG00000005644	-	94	96.154	Mesocricetus_auratus
ENSXMAG00000029068	sf3a2	94	81.588	ENSMMOG00000010657	sf3a2	86	85.950	Mola_mola
ENSXMAG00000029068	sf3a2	83	95.885	ENSMALG00000020442	sf3a2	90	94.737	Monopterus_albus
ENSXMAG00000029068	sf3a2	74	95.370	MGP_CAROLIEiJ_G0015602	-	94	96.154	Mus_caroli
ENSXMAG00000029068	sf3a2	74	95.370	MGP_PahariEiJ_G0031015	-	94	96.154	Mus_pahari
ENSXMAG00000029068	sf3a2	74	95.370	MGP_SPRETEiJ_G0016420	-	94	96.154	Mus_spretus
ENSXMAG00000029068	sf3a2	62	95.604	ENSNGAG00000023309	-	94	95.604	Nannospalax_galili
ENSXMAG00000029068	sf3a2	85	93.173	ENSNBRG00000019872	sf3a2	81	95.397	Neolamprologus_brichardi
ENSXMAG00000029068	sf3a2	64	94.118	ENSODEG00000013722	-	100	94.118	Octodon_degus
ENSXMAG00000029068	sf3a2	85	93.173	ENSONIG00000010198	sf3a2	81	95.816	Oreochromis_niloticus
ENSXMAG00000029068	sf3a2	70	94.146	ENSOANG00000013649	-	98	93.689	Ornithorhynchus_anatinus
ENSXMAG00000029068	sf3a2	91	94.382	ENSORLG00000015301	sf3a2	82	96.667	Oryzias_latipes
ENSXMAG00000029068	sf3a2	91	94.382	ENSORLG00020017235	sf3a2	82	96.667	Oryzias_latipes_hni
ENSXMAG00000029068	sf3a2	91	94.757	ENSORLG00015017116	sf3a2	82	96.667	Oryzias_latipes_hsok
ENSXMAG00000029068	sf3a2	82	96.667	ENSOMEG00000020860	sf3a2	82	96.667	Oryzias_melastigma
ENSXMAG00000029068	sf3a2	74	95.370	ENSOARG00000014357	SF3A2	53	94.931	Ovis_aries
ENSXMAG00000029068	sf3a2	83	93.416	ENSPKIG00000009487	sf3a2	76	94.142	Paramormyrops_kingsleyae
ENSXMAG00000029068	sf3a2	74	94.495	ENSPSIG00000010839	SF3A2	71	92.070	Pelodiscus_sinensis
ENSXMAG00000029068	sf3a2	74	98.611	ENSPMGG00000017249	sf3a2	80	98.058	Periophthalmus_magnuspinnatus
ENSXMAG00000029068	sf3a2	99	97.279	ENSPFOG00000015945	sf3a2	100	97.279	Poecilia_formosa
ENSXMAG00000029068	sf3a2	99	97.619	ENSPLAG00000010052	sf3a2	100	97.619	Poecilia_latipinna
ENSXMAG00000029068	sf3a2	99	97.279	ENSPMEG00000000184	sf3a2	100	97.279	Poecilia_mexicana
ENSXMAG00000029068	sf3a2	99	97.619	ENSPREG00000017808	sf3a2	100	97.619	Poecilia_reticulata
ENSXMAG00000029068	sf3a2	88	93.050	ENSPNYG00000006928	sf3a2	81	95.397	Pundamilia_nyererei
ENSXMAG00000029068	sf3a2	83	93.004	ENSPNAG00000027582	sf3a2	79	93.724	Pygocentrus_nattereri
ENSXMAG00000029068	sf3a2	74	94.444	ENSSHAG00000011677	-	91	91.111	Sarcophilus_harrisii
ENSXMAG00000029068	sf3a2	66	84.896	ENSSHAG00000011646	-	71	81.592	Sarcophilus_harrisii
ENSXMAG00000029068	sf3a2	87	91.473	ENSSFOG00015010920	sf3a2	69	94.191	Scleropages_formosus
ENSXMAG00000029068	sf3a2	85	93.952	ENSSMAG00000002629	sf3a2	83	95.816	Scophthalmus_maximus
ENSXMAG00000029068	sf3a2	85	94.378	ENSSDUG00000015810	sf3a2	91	94.361	Seriola_dumerili
ENSXMAG00000029068	sf3a2	85	94.378	ENSSLDG00000010874	sf3a2	91	94.361	Seriola_lalandi_dorsalis
ENSXMAG00000029068	sf3a2	83	94.650	ENSSPAG00000004960	sf3a2	99	93.559	Stegastes_partitus
ENSXMAG00000029068	sf3a2	70	96.098	ENSTGUG00000000305	SF3A2	100	96.098	Taeniopygia_guttata
ENSXMAG00000029068	sf3a2	82	94.561	ENSTRUG00000009045	sf3a2	83	94.561	Takifugu_rubripes
ENSXMAG00000029068	sf3a2	91	91.386	ENSTNIG00000015318	sf3a2	83	93.724	Tetraodon_nigroviridis
ENSXMAG00000029068	sf3a2	83	88.934	ENSXETG00000024943	sf3a2	53	95.392	Xenopus_tropicalis
ENSXMAG00000029068	sf3a2	100	100.000	ENSXCOG00000008222	sf3a2	100	100.000	Xiphophorus_couchianus