EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000029090 (Gene tree)
Gene ID: -
Gene Symbol: PABPN1L
Alias: ePABP2
Full Name: poly(A) binding protein nuclear 1 like%2C cytoplasmic
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 2258 bases
Position: chr4:20764272-20766529
Accession: 102231342
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000036254	RRM_1	PF00076.22	6.5e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000037995	PABPN1L-201	669	XM_005806738	ENSXMAP00000036254	222 (aa)	XP_005806795	-

Gene Model

Click here to download ENSXMAG00000029090's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000029090's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000029090	PABPN1L	94	87.264	ENSAPOG00000000685	PABPN1L	69	87.324	Acanthochromis_polyacanthus
ENSXMAG00000029090	PABPN1L	91	90.640	ENSACIG00000021400	PABPN1L	87	90.640	Amphilophus_citrinellus
ENSXMAG00000029090	PABPN1L	94	88.263	ENSAOCG00000019844	PABPN1L	81	88.263	Amphiprion_ocellaris
ENSXMAG00000029090	PABPN1L	94	88.732	ENSAPEG00000019534	PABPN1L	81	88.732	Amphiprion_percula
ENSXMAG00000029090	PABPN1L	89	91.919	ENSATEG00000011646	PABPN1L	85	87.324	Anabas_testudineus
ENSXMAG00000029090	PABPN1L	51	57.018	ENSAPLG00000009174	PABPN1L	70	68.675	Anas_platyrhynchos
ENSXMAG00000029090	PABPN1L	59	65.909	ENSACAG00000013250	PABPN1L	55	72.549	Anolis_carolinensis
ENSXMAG00000029090	PABPN1L	94	87.793	ENSACLG00000025147	PABPN1L	82	87.793	Astatotilapia_calliptera
ENSXMAG00000029090	PABPN1L	97	81.944	ENSCSEG00000001142	pabpn1l	79	84.466	Cynoglossus_semilaevis
ENSXMAG00000029090	PABPN1L	89	97.475	ENSCVAG00000015547	PABPN1L	81	92.488	Cyprinodon_variegatus
ENSXMAG00000029090	PABPN1L	88	71.574	ENSELUG00000018385	PABPN1L	75	66.837	Esox_lucius
ENSXMAG00000029090	PABPN1L	94	93.427	ENSFHEG00000018295	PABPN1L	81	93.427	Fundulus_heteroclitus
ENSXMAG00000029090	PABPN1L	89	80.203	ENSGMOG00000001475	PABPN1L	74	81.726	Gadus_morhua
ENSXMAG00000029090	PABPN1L	64	61.111	ENSGALG00000006242	PABPN1L	57	70.588	Gallus_gallus
ENSXMAG00000029090	PABPN1L	89	99.495	ENSGAFG00000012565	PABPN1L	81	94.366	Gambusia_affinis
ENSXMAG00000029090	PABPN1L	96	82.805	ENSGACG00000015428	PABPN1L	73	89.340	Gasterosteus_aculeatus
ENSXMAG00000029090	PABPN1L	94	87.793	ENSHBUG00000002388	PABPN1L	81	87.793	Haplochromis_burtoni
ENSXMAG00000029090	PABPN1L	95	84.112	ENSHCOG00000004151	PABPN1L	79	84.507	Hippocampus_comes
ENSXMAG00000029090	PABPN1L	61	72.794	ENSIPUG00000023583	PABPN1L	55	81.132	Ictalurus_punctatus
ENSXMAG00000029090	PABPN1L	89	93.434	ENSKMAG00000001112	PABPN1L	88	93.434	Kryptolebias_marmoratus
ENSXMAG00000029090	PABPN1L	95	80.093	ENSLBEG00000011647	PABPN1L	78	82.791	Labrus_bergylta
ENSXMAG00000029090	PABPN1L	94	87.793	ENSMZEG00005002186	PABPN1L	82	87.793	Maylandia_zebra
ENSXMAG00000029090	PABPN1L	93	86.957	ENSMMOG00000017714	PABPN1L	90	86.957	Mola_mola
ENSXMAG00000029090	PABPN1L	89	87.879	ENSMALG00000016926	PABPN1L	76	87.879	Monopterus_albus
ENSXMAG00000029090	PABPN1L	94	87.793	ENSNBRG00000017078	PABPN1L	90	87.793	Neolamprologus_brichardi
ENSXMAG00000029090	PABPN1L	100	82.063	ENSORLG00000026560	PABPN1L	81	82.381	Oryzias_latipes
ENSXMAG00000029090	PABPN1L	100	82.063	ENSORLG00020015068	PABPN1L	81	82.381	Oryzias_latipes_hni
ENSXMAG00000029090	PABPN1L	100	82.063	ENSORLG00015000397	PABPN1L	81	82.381	Oryzias_latipes_hsok
ENSXMAG00000029090	PABPN1L	100	81.614	ENSOMEG00000017896	PABPN1L	55	85.859	Oryzias_melastigma
ENSXMAG00000029090	PABPN1L	64	63.576	ENSPSIG00000003404	PABPN1L	56	71.698	Pelodiscus_sinensis
ENSXMAG00000029090	PABPN1L	94	83.732	ENSPMGG00000013927	PABPN1L	94	83.732	Periophthalmus_magnuspinnatus
ENSXMAG00000029090	PABPN1L	62	60.584	ENSPCIG00000007038	-	67	69.072	Phascolarctos_cinereus
ENSXMAG00000029090	PABPN1L	89	99.495	ENSPFOG00000007001	PABPN1L	81	94.366	Poecilia_formosa
ENSXMAG00000029090	PABPN1L	89	99.495	ENSPLAG00000018431	PABPN1L	81	94.366	Poecilia_latipinna
ENSXMAG00000029090	PABPN1L	89	99.495	ENSPMEG00000009108	PABPN1L	81	94.366	Poecilia_mexicana
ENSXMAG00000029090	PABPN1L	81	90.761	ENSPMEG00000000169	-	91	90.761	Poecilia_mexicana
ENSXMAG00000029090	PABPN1L	96	94.009	ENSPREG00000022533	PABPN1L	92	94.366	Poecilia_reticulata
ENSXMAG00000029090	PABPN1L	94	87.793	ENSPNYG00000004803	PABPN1L	82	87.793	Pundamilia_nyererei
ENSXMAG00000029090	PABPN1L	94	82.569	ENSSMAG00000021348	PABPN1L	82	79.817	Scophthalmus_maximus
ENSXMAG00000029090	PABPN1L	94	87.793	ENSSDUG00000006986	PABPN1L	81	87.793	Seriola_dumerili
ENSXMAG00000029090	PABPN1L	94	87.793	ENSSLDG00000021845	PABPN1L	81	87.793	Seriola_lalandi_dorsalis
ENSXMAG00000029090	PABPN1L	95	87.442	ENSSPAG00000017978	PABPN1L	81	87.793	Stegastes_partitus
ENSXMAG00000029090	PABPN1L	96	75.115	ENSTRUG00000024725	PABPN1L	79	75.587	Takifugu_rubripes
ENSXMAG00000029090	PABPN1L	86	92.188	ENSTNIG00000009416	PABPN1L	100	92.188	Tetraodon_nigroviridis
ENSXMAG00000029090	PABPN1L	100	95.133	ENSXCOG00000003254	PABPN1L	98	95.133	Xiphophorus_couchianus