EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000029318 (Gene tree)
Gene ID: -
Gene Symbol: si:ch211-153b23.3
Alias: -
Full Name: uncharacterized LOC111606981
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 3520 bases
Position: chr23:19632324-19635843
Accession: 111606981
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000040007	Sua5_yciO_yrdC	PF01300.18	9.2e-34	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000028215	-	2622	XM_023328620	ENSXMAP00000040007	873 (aa)	XP_023184388	-

Gene Model

Click here to download ENSXMAG00000029318's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000029318's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000029318	si:ch211-153b23.3	59	32.336	ENSAPOG00000006178	si:ch211-153b23.4	59	32.336	Acanthochromis_polyacanthus
ENSXMAG00000029318	si:ch211-153b23.3	59	32.336	ENSAPOG00000006144	si:ch211-153b23.4	60	32.336	Acanthochromis_polyacanthus
ENSXMAG00000029318	si:ch211-153b23.3	93	91.515	ENSACIG00000006968	si:ch211-153b23.3	100	91.515	Amphilophus_citrinellus
ENSXMAG00000029318	si:ch211-153b23.3	99	84.073	ENSAOCG00000010974	si:ch211-153b23.3	100	84.073	Amphiprion_ocellaris
ENSXMAG00000029318	si:ch211-153b23.3	59	32.514	ENSAPEG00000014665	si:ch211-153b23.4	60	32.514	Amphiprion_percula
ENSXMAG00000029318	si:ch211-153b23.3	99	83.732	ENSAPEG00000014700	si:ch211-153b23.3	100	83.732	Amphiprion_percula
ENSXMAG00000029318	si:ch211-153b23.3	99	80.181	ENSATEG00000004956	si:ch211-153b23.3	100	80.181	Anabas_testudineus
ENSXMAG00000029318	si:ch211-153b23.3	59	31.860	ENSATEG00000004948	si:ch211-153b23.4	59	31.860	Anabas_testudineus
ENSXMAG00000029318	si:ch211-153b23.3	99	80.866	ENSACLG00000005894	si:ch211-153b23.3	100	80.866	Astatotilapia_calliptera
ENSXMAG00000029318	si:ch211-153b23.3	59	33.523	ENSACLG00000005471	si:ch211-153b23.4	58	33.523	Astatotilapia_calliptera
ENSXMAG00000029318	si:ch211-153b23.3	99	72.014	ENSAMXG00000038564	si:ch211-153b23.3	99	72.178	Astyanax_mexicanus
ENSXMAG00000029318	si:ch211-153b23.3	77	30.736	ENSAMXG00000013879	si:ch211-153b23.4	77	30.736	Astyanax_mexicanus
ENSXMAG00000029318	si:ch211-153b23.3	99	78.888	ENSCSEG00000014853	si:ch211-153b23.3	100	78.888	Cynoglossus_semilaevis
ENSXMAG00000029318	si:ch211-153b23.3	99	90.888	ENSCVAG00000021124	si:ch211-153b23.3	100	90.888	Cyprinodon_variegatus
ENSXMAG00000029318	si:ch211-153b23.3	100	71.605	ENSDARG00000104919	si:ch211-153b23.3	100	71.605	Danio_rerio
ENSXMAG00000029318	si:ch211-153b23.3	80	83.929	ENSELUG00000004912	si:ch211-153b23.3	100	83.929	Esox_lucius
ENSXMAG00000029318	si:ch211-153b23.3	100	91.600	ENSFHEG00000010030	si:ch211-153b23.3	100	91.600	Fundulus_heteroclitus
ENSXMAG00000029318	si:ch211-153b23.3	74	30.804	ENSFHEG00000010001	si:ch211-153b23.4	81	30.804	Fundulus_heteroclitus
ENSXMAG00000029318	si:ch211-153b23.3	100	96.595	ENSGAFG00000007455	si:ch211-153b23.3	100	96.595	Gambusia_affinis
ENSXMAG00000029318	si:ch211-153b23.3	56	32.797	ENSHBUG00000000013	si:ch211-153b23.4	64	33.199	Haplochromis_burtoni
ENSXMAG00000029318	si:ch211-153b23.3	99	81.093	ENSHBUG00000001760	si:ch211-153b23.3	100	81.093	Haplochromis_burtoni
ENSXMAG00000029318	si:ch211-153b23.3	100	71.543	ENSIPUG00000015213	si:ch211-153b23.3	100	71.543	Ictalurus_punctatus
ENSXMAG00000029318	si:ch211-153b23.3	73	32.116	ENSIPUG00000015205	si:ch211-153b23.4	75	32.116	Ictalurus_punctatus
ENSXMAG00000029318	si:ch211-153b23.3	73	30.568	ENSKMAG00000006919	-	72	30.568	Kryptolebias_marmoratus
ENSXMAG00000029318	si:ch211-153b23.3	100	84.563	ENSKMAG00000006792	si:ch211-153b23.3	100	84.563	Kryptolebias_marmoratus
ENSXMAG00000029318	si:ch211-153b23.3	59	32.156	ENSLBEG00000026309	si:ch211-153b23.4	58	32.143	Labrus_bergylta
ENSXMAG00000029318	si:ch211-153b23.3	100	80.248	ENSLBEG00000026324	si:ch211-153b23.3	100	80.248	Labrus_bergylta
ENSXMAG00000029318	si:ch211-153b23.3	94	57.914	ENSLACG00000005800	-	99	57.467	Latimeria_chalumnae
ENSXMAG00000029318	si:ch211-153b23.3	85	53.061	ENSLOCG00000015063	si:ch211-153b23.3	98	53.061	Lepisosteus_oculatus
ENSXMAG00000029318	si:ch211-153b23.3	99	81.973	ENSMAMG00000009328	si:ch211-153b23.3	100	81.973	Mastacembelus_armatus
ENSXMAG00000029318	si:ch211-153b23.3	59	33.207	ENSMZEG00005011433	si:ch211-153b23.4	63	32.827	Maylandia_zebra
ENSXMAG00000029318	si:ch211-153b23.3	99	80.979	ENSMZEG00005011450	si:ch211-153b23.3	100	80.979	Maylandia_zebra
ENSXMAG00000029318	si:ch211-153b23.3	59	32.762	ENSMMOG00000004425	si:ch211-153b23.4	64	32.762	Mola_mola
ENSXMAG00000029318	si:ch211-153b23.3	99	80.524	ENSMMOG00000004436	si:ch211-153b23.3	100	80.524	Mola_mola
ENSXMAG00000029318	si:ch211-153b23.3	99	81.207	ENSNBRG00000013370	si:ch211-153b23.3	100	81.207	Neolamprologus_brichardi
ENSXMAG00000029318	si:ch211-153b23.3	59	32.700	ENSNBRG00000013392	si:ch211-153b23.4	65	32.700	Neolamprologus_brichardi
ENSXMAG00000029318	si:ch211-153b23.3	59	33.333	ENSONIG00000017875	si:ch211-153b23.4	59	33.333	Oreochromis_niloticus
ENSXMAG00000029318	si:ch211-153b23.3	99	80.931	ENSORLG00000006161	si:ch211-153b23.3	99	80.931	Oryzias_latipes
ENSXMAG00000029318	si:ch211-153b23.3	59	33.710	ENSORLG00000006169	si:ch211-153b23.4	59	33.710	Oryzias_latipes
ENSXMAG00000029318	si:ch211-153b23.3	97	82.151	ENSORLG00020000910	si:ch211-153b23.3	100	82.151	Oryzias_latipes_hni
ENSXMAG00000029318	si:ch211-153b23.3	59	33.902	ENSORLG00015003709	si:ch211-153b23.4	59	33.902	Oryzias_latipes_hsok
ENSXMAG00000029318	si:ch211-153b23.3	97	81.722	ENSORLG00015003698	si:ch211-153b23.3	100	81.722	Oryzias_latipes_hsok
ENSXMAG00000029318	si:ch211-153b23.3	99	82.406	ENSOMEG00000007661	si:ch211-153b23.3	99	82.406	Oryzias_melastigma
ENSXMAG00000029318	si:ch211-153b23.3	80	30.094	ENSPKIG00000014429	si:ch211-153b23.4	85	30.094	Paramormyrops_kingsleyae
ENSXMAG00000029318	si:ch211-153b23.3	59	32.150	ENSPKIG00000025681	si:ch211-153b23.4	60	32.150	Paramormyrops_kingsleyae
ENSXMAG00000029318	si:ch211-153b23.3	97	72.706	ENSPKIG00000022450	si:ch211-153b23.3	100	72.706	Paramormyrops_kingsleyae
ENSXMAG00000029318	si:ch211-153b23.3	99	49.889	ENSPKIG00000021029	-	99	49.889	Paramormyrops_kingsleyae
ENSXMAG00000029318	si:ch211-153b23.3	82	82.979	ENSPMGG00000001311	si:ch211-153b23.3	99	82.979	Periophthalmus_magnuspinnatus
ENSXMAG00000029318	si:ch211-153b23.3	74	30.667	ENSPFOG00000012164	si:ch211-153b23.4	91	30.667	Poecilia_formosa
ENSXMAG00000029318	si:ch211-153b23.3	100	95.045	ENSPFOG00000012289	si:ch211-153b23.3	100	95.045	Poecilia_formosa
ENSXMAG00000029318	si:ch211-153b23.3	74	30.827	ENSPLAG00000016295	si:ch211-153b23.4	80	30.827	Poecilia_latipinna
ENSXMAG00000029318	si:ch211-153b23.3	99	96.123	ENSPLAG00000016320	si:ch211-153b23.3	100	96.123	Poecilia_latipinna
ENSXMAG00000029318	si:ch211-153b23.3	58	33.271	ENSPMEG00000007538	si:ch211-153b23.4	63	33.271	Poecilia_mexicana
ENSXMAG00000029318	si:ch211-153b23.3	100	96.141	ENSPMEG00000008884	si:ch211-153b23.3	100	96.141	Poecilia_mexicana
ENSXMAG00000029318	si:ch211-153b23.3	99	80.866	ENSPNYG00000000251	si:ch211-153b23.3	100	80.866	Pundamilia_nyererei
ENSXMAG00000029318	si:ch211-153b23.3	59	33.207	ENSPNYG00000000250	si:ch211-153b23.4	63	32.827	Pundamilia_nyererei
ENSXMAG00000029318	si:ch211-153b23.3	59	33.208	ENSPNAG00000019554	si:ch211-153b23.4	58	33.208	Pygocentrus_nattereri
ENSXMAG00000029318	si:ch211-153b23.3	100	73.439	ENSPNAG00000019592	si:ch211-153b23.3	100	73.439	Pygocentrus_nattereri
ENSXMAG00000029318	si:ch211-153b23.3	59	31.481	ENSSFOG00015003920	-	58	31.481	Scleropages_formosus
ENSXMAG00000029318	si:ch211-153b23.3	100	72.768	ENSSFOG00015010910	si:ch211-153b23.3	100	72.768	Scleropages_formosus
ENSXMAG00000029318	si:ch211-153b23.3	59	33.396	ENSSFOG00015010891	si:ch211-153b23.4	60	33.396	Scleropages_formosus
ENSXMAG00000029318	si:ch211-153b23.3	69	51.122	ENSSFOG00015009030	-	96	51.122	Scleropages_formosus
ENSXMAG00000029318	si:ch211-153b23.3	99	82.574	ENSSMAG00000005446	si:ch211-153b23.3	100	82.574	Scophthalmus_maximus
ENSXMAG00000029318	si:ch211-153b23.3	99	83.145	ENSSLDG00000008629	si:ch211-153b23.3	100	83.145	Seriola_lalandi_dorsalis
ENSXMAG00000029318	si:ch211-153b23.3	99	76.994	ENSTRUG00000020530	si:ch211-153b23.3	100	77.341	Takifugu_rubripes
ENSXMAG00000029318	si:ch211-153b23.3	93	81.413	ENSTNIG00000008962	si:ch211-153b23.3	99	81.413	Tetraodon_nigroviridis
ENSXMAG00000029318	si:ch211-153b23.3	59	33.898	ENSXMAG00000009416	-	61	33.898	Xiphophorus_maculatus
ENSXMAG00000029318	si:ch211-153b23.3	59	33.710	ENSXMAG00000021388	si:ch211-153b23.4	62	33.710	Xiphophorus_maculatus