EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000029339 (Gene tree)
Gene ID: 102234020
Gene Symbol: -
Alias: -
Full Name: CUGBP Elav-like family member 1
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 86008 bases
Position: chr4:34689094-34775101
Accession: 102234020
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000039465	RRM_1	PF00076.22	8.1e-51	1	3
ENSXMAP00000039465	RRM_1	PF00076.22	8.1e-51	2	3
ENSXMAP00000039465	RRM_1	PF00076.22	8.1e-51	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000026251	-	1413	XM_023332729	ENSXMAP00000039465	470 (aa)	XP_023188497	-

Gene Model

Click here to download ENSXMAG00000029339's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000029339's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000029339	-	100	72.016	ENSG00000149187	CELF1	100	83.158	Homo_sapiens
ENSXMAG00000029339	-	100	81.992	ENSAPOG00000024000	celf1	98	81.818	Acanthochromis_polyacanthus
ENSXMAG00000029339	-	100	71.663	ENSAMEG00000007596	CELF1	95	72.895	Ailuropoda_melanoleuca
ENSXMAG00000029339	-	100	79.296	ENSACIG00000023843	celf1	100	79.503	Amphilophus_citrinellus
ENSXMAG00000029339	-	100	81.316	ENSAOCG00000001252	celf1	100	78.659	Amphiprion_ocellaris
ENSXMAG00000029339	-	100	76.892	ENSAPEG00000002340	celf1	97	78.862	Amphiprion_percula
ENSXMAG00000029339	-	100	78.423	ENSATEG00000010871	celf1	100	78.423	Anabas_testudineus
ENSXMAG00000029339	-	100	72.746	ENSACAG00000002114	CELF1	95	73.402	Anolis_carolinensis
ENSXMAG00000029339	-	100	71.869	ENSANAG00000031770	CELF1	95	73.101	Aotus_nancymaae
ENSXMAG00000029339	-	100	80.297	ENSACLG00000010181	-	100	79.089	Astatotilapia_calliptera
ENSXMAG00000029339	-	100	71.881	ENSAMXG00000020576	celf1	93	75.150	Astyanax_mexicanus
ENSXMAG00000029339	-	100	71.663	ENSBTAG00000002520	CELF1	100	72.895	Bos_taurus
ENSXMAG00000029339	-	100	72.117	ENSCJAG00000020133	CELF1	95	72.541	Callithrix_jacchus
ENSXMAG00000029339	-	100	71.869	ENSCAFG00000008452	CELF1	95	73.101	Canis_familiaris
ENSXMAG00000029339	-	100	73.878	ENSCAFG00020025487	CELF1	100	72.245	Canis_lupus_dingo
ENSXMAG00000029339	-	100	73.913	ENSCHIG00000024582	CELF1	95	73.706	Capra_hircus
ENSXMAG00000029339	-	100	71.869	ENSTSYG00000003866	CELF1	100	73.101	Carlito_syrichta
ENSXMAG00000029339	-	99	53.700	ENSCAPG00000006787	CELF1	94	54.661	Cavia_aperea
ENSXMAG00000029339	-	100	71.311	ENSCPOG00000036381	CELF1	100	72.541	Cavia_porcellus
ENSXMAG00000029339	-	100	71.869	ENSCCAG00000033487	CELF1	100	73.101	Cebus_capucinus
ENSXMAG00000029339	-	100	71.869	ENSCATG00000040143	CELF1	100	73.101	Cercocebus_atys
ENSXMAG00000029339	-	100	71.869	ENSCLAG00000011791	CELF1	100	68.852	Chinchilla_lanigera
ENSXMAG00000029339	-	100	71.869	ENSCSAG00000005786	CELF1	95	72.895	Chlorocebus_sabaeus
ENSXMAG00000029339	-	58	93.617	ENSCHOG00000004196	-	64	93.617	Choloepus_hoffmanni
ENSXMAG00000029339	-	100	71.811	ENSCPBG00000022914	CELF1	100	72.653	Chrysemys_picta_bellii
ENSXMAG00000029339	-	100	71.663	ENSCANG00000032689	CELF1	100	72.727	Colobus_angolensis_palliatus
ENSXMAG00000029339	-	100	71.869	ENSCGRG00001011274	Celf1	95	73.101	Cricetulus_griseus_chok1gshd
ENSXMAG00000029339	-	100	71.869	ENSCGRG00000015357	Celf1	95	73.101	Cricetulus_griseus_crigri
ENSXMAG00000029339	-	100	77.053	ENSCSEG00000008675	celf1	100	77.263	Cynoglossus_semilaevis
ENSXMAG00000029339	-	100	73.176	ENSDARG00000005315	celf1	100	92.308	Danio_rerio
ENSXMAG00000029339	-	100	71.869	ENSDNOG00000009523	CELF1	100	73.101	Dasypus_novemcinctus
ENSXMAG00000029339	-	100	65.000	ENSDORG00000013721	Celf1	96	64.033	Dipodomys_ordii
ENSXMAG00000029339	-	72	86.047	ENSETEG00000004507	CELF1	83	86.047	Echinops_telfairi
ENSXMAG00000029339	-	100	64.754	ENSEASG00005010831	CELF1	94	65.984	Equus_asinus_asinus
ENSXMAG00000029339	-	100	72.222	ENSECAG00000007741	CELF1	100	73.292	Equus_caballus
ENSXMAG00000029339	-	85	90.909	ENSEEUG00000009782	CELF1	86	90.909	Erinaceus_europaeus
ENSXMAG00000029339	-	100	79.253	ENSELUG00000023173	celf1	100	79.046	Esox_lucius
ENSXMAG00000029339	-	100	71.869	ENSFCAG00000002535	CELF1	100	73.101	Felis_catus
ENSXMAG00000029339	-	100	72.428	ENSFALG00000006402	CELF1	95	73.457	Ficedula_albicollis
ENSXMAG00000029339	-	100	71.663	ENSFDAG00000008517	CELF1	100	72.336	Fukomys_damarensis
ENSXMAG00000029339	-	100	75.052	ENSGMOG00000012783	celf1	98	75.876	Gadus_morhua
ENSXMAG00000029339	-	100	72.222	ENSGALG00000008097	CELF1	100	73.251	Gallus_gallus
ENSXMAG00000029339	-	100	70.270	ENSGACG00000014226	celf1	94	72.345	Gasterosteus_aculeatus
ENSXMAG00000029339	-	100	72.165	ENSGAGG00000011562	CELF1	100	73.196	Gopherus_agassizii
ENSXMAG00000029339	-	100	71.311	ENSGGOG00000004106	CELF1	95	72.541	Gorilla_gorilla
ENSXMAG00000029339	-	100	79.089	ENSHBUG00000017881	celf1	95	79.012	Haplochromis_burtoni
ENSXMAG00000029339	-	100	68.553	ENSHGLG00000019214	-	100	69.811	Heterocephalus_glaber_female
ENSXMAG00000029339	-	100	71.311	ENSHGLG00000006909	-	100	72.541	Heterocephalus_glaber_female
ENSXMAG00000029339	-	100	68.595	ENSHGLG00100017423	-	100	69.835	Heterocephalus_glaber_male
ENSXMAG00000029339	-	100	71.311	ENSHGLG00100013863	-	100	72.541	Heterocephalus_glaber_male
ENSXMAG00000029339	-	100	78.645	ENSHCOG00000000258	celf1	100	78.029	Hippocampus_comes
ENSXMAG00000029339	-	100	73.307	ENSIPUG00000023708	celf1	100	75.200	Ictalurus_punctatus
ENSXMAG00000029339	-	100	71.869	ENSSTOG00000000613	CELF1	100	72.541	Ictidomys_tridecemlineatus
ENSXMAG00000029339	-	100	71.869	ENSJJAG00000020280	Celf1	95	73.101	Jaculus_jaculus
ENSXMAG00000029339	-	100	79.218	ENSLBEG00000018296	celf1	100	77.070	Labrus_bergylta
ENSXMAG00000029339	-	69	72.781	ENSLBEG00000002047	-	98	72.781	Labrus_bergylta
ENSXMAG00000029339	-	61	61.589	ENSLACG00000018990	CELF1	78	63.057	Latimeria_chalumnae
ENSXMAG00000029339	-	100	74.900	ENSLOCG00000005966	celf1	94	75.100	Lepisosteus_oculatus
ENSXMAG00000029339	-	100	71.663	ENSLAFG00000003484	CELF1	95	72.895	Loxodonta_africana
ENSXMAG00000029339	-	100	71.458	ENSMFAG00000003505	CELF1	100	72.727	Macaca_fascicularis
ENSXMAG00000029339	-	100	71.663	ENSMMUG00000011657	CELF1	99	72.727	Macaca_mulatta
ENSXMAG00000029339	-	100	72.016	ENSMNEG00000022558	CELF1	100	73.292	Macaca_nemestrina
ENSXMAG00000029339	-	100	71.869	ENSMLEG00000040834	CELF1	100	72.727	Mandrillus_leucophaeus
ENSXMAG00000029339	-	100	81.316	ENSMAMG00000010052	celf1	100	79.296	Mastacembelus_armatus
ENSXMAG00000029339	-	100	79.089	ENSMZEG00005018307	celf1	100	79.089	Maylandia_zebra
ENSXMAG00000029339	-	100	70.697	ENSMGAG00000010629	CELF1	96	73.101	Meleagris_gallopavo
ENSXMAG00000029339	-	100	71.869	ENSMAUG00000009468	Celf1	100	72.541	Mesocricetus_auratus
ENSXMAG00000029339	-	100	71.311	ENSMICG00000045113	CELF1	95	72.541	Microcebus_murinus
ENSXMAG00000029339	-	100	72.074	ENSMOCG00000012633	Celf1	100	72.746	Microtus_ochrogaster
ENSXMAG00000029339	-	100	77.847	ENSMMOG00000015460	celf1	95	78.261	Mola_mola
ENSXMAG00000029339	-	100	72.690	ENSMODG00000019913	CELF1	100	73.922	Monodelphis_domestica
ENSXMAG00000029339	-	100	72.074	MGP_CAROLIEiJ_G0023949	Celf1	100	72.934	Mus_caroli
ENSXMAG00000029339	-	100	72.074	ENSMUSG00000005506	Celf1	100	73.306	Mus_musculus
ENSXMAG00000029339	-	100	72.074	MGP_PahariEiJ_G0025385	Celf1	100	73.306	Mus_pahari
ENSXMAG00000029339	-	100	71.869	MGP_SPRETEiJ_G0024859	Celf1	100	72.934	Mus_spretus
ENSXMAG00000029339	-	100	71.869	ENSMPUG00000003960	CELF1	88	73.101	Mustela_putorius_furo
ENSXMAG00000029339	-	100	71.079	ENSMLUG00000016631	CELF1	95	72.301	Myotis_lucifugus
ENSXMAG00000029339	-	100	70.637	ENSNGAG00000017390	Celf1	95	71.869	Nannospalax_galili
ENSXMAG00000029339	-	99	58.511	ENSNBRG00000023547	-	85	58.298	Neolamprologus_brichardi
ENSXMAG00000029339	-	100	71.663	ENSNLEG00000014638	CELF1	100	72.727	Nomascus_leucogenys
ENSXMAG00000029339	-	100	72.895	ENSMEUG00000007763	CELF1	100	74.127	Notamacropus_eugenii
ENSXMAG00000029339	-	100	71.047	ENSOPRG00000003239	-	100	72.279	Ochotona_princeps
ENSXMAG00000029339	-	100	71.869	ENSODEG00000015204	CELF1	95	73.101	Octodon_degus
ENSXMAG00000029339	-	100	77.393	ENSONIG00000008300	celf1	95	78.439	Oreochromis_niloticus
ENSXMAG00000029339	-	100	72.131	ENSOANG00000007896	CELF1	96	72.177	Ornithorhynchus_anatinus
ENSXMAG00000029339	-	100	71.869	ENSOCUG00000001311	CELF1	95	72.690	Oryctolagus_cuniculus
ENSXMAG00000029339	-	100	77.640	ENSOMEG00000002381	celf1	100	78.054	Oryzias_melastigma
ENSXMAG00000029339	-	100	70.876	ENSOGAG00000011600	CELF1	95	71.894	Otolemur_garnettii
ENSXMAG00000029339	-	100	72.074	ENSOARG00000006924	CELF1	100	73.306	Ovis_aries
ENSXMAG00000029339	-	100	71.869	ENSPPAG00000033870	CELF1	100	73.101	Pan_paniscus
ENSXMAG00000029339	-	100	71.869	ENSPPRG00000002376	CELF1	100	73.101	Panthera_pardus
ENSXMAG00000029339	-	100	71.869	ENSPTIG00000003974	CELF1	100	73.101	Panthera_tigris_altaica
ENSXMAG00000029339	-	100	73.093	ENSPTRG00000052299	CELF1	100	72.541	Pan_troglodytes
ENSXMAG00000029339	-	100	71.311	ENSPANG00000021676	CELF1	95	72.541	Papio_anubis
ENSXMAG00000029339	-	100	76.190	ENSPKIG00000012324	celf1	100	75.983	Paramormyrops_kingsleyae
ENSXMAG00000029339	-	100	70.183	ENSPSIG00000003922	CELF1	95	70.408	Pelodiscus_sinensis
ENSXMAG00000029339	-	100	72.074	ENSPEMG00000015644	Celf1	100	72.746	Peromyscus_maniculatus_bairdii
ENSXMAG00000029339	-	100	73.101	ENSPCIG00000022947	CELF1	97	74.333	Phascolarctos_cinereus
ENSXMAG00000029339	-	69	80.415	ENSPFOG00000000961	-	100	80.415	Poecilia_formosa
ENSXMAG00000029339	-	89	89.802	ENSPLAG00000019373	-	85	90.652	Poecilia_latipinna
ENSXMAG00000029339	-	100	87.131	ENSPREG00000022185	-	94	86.920	Poecilia_reticulata
ENSXMAG00000029339	-	100	71.107	ENSPPYG00000003302	CELF1	95	72.336	Pongo_abelii
ENSXMAG00000029339	-	100	70.637	ENSPCAG00000002631	CELF1	100	71.869	Procavia_capensis
ENSXMAG00000029339	-	100	67.623	ENSPCOG00000021865	CELF1	95	68.852	Propithecus_coquereli
ENSXMAG00000029339	-	97	70.492	ENSPVAG00000007340	CELF1	100	71.897	Pteropus_vampyrus
ENSXMAG00000029339	-	80	76.161	ENSPNYG00000023719	-	88	76.471	Pundamilia_nyererei
ENSXMAG00000029339	-	100	73.653	ENSPNAG00000013418	celf1	93	76.200	Pygocentrus_nattereri
ENSXMAG00000029339	-	100	71.516	ENSRNOG00000010379	Celf1	100	72.746	Rattus_norvegicus
ENSXMAG00000029339	-	100	71.311	ENSRBIG00000042406	CELF1	95	72.541	Rhinopithecus_bieti
ENSXMAG00000029339	-	100	71.869	ENSRROG00000032588	CELF1	95	73.101	Rhinopithecus_roxellana
ENSXMAG00000029339	-	100	64.657	ENSSBOG00000021912	CELF1	94	66.320	Saimiri_boliviensis_boliviensis
ENSXMAG00000029339	-	100	72.336	ENSSHAG00000017438	CELF1	100	73.566	Sarcophilus_harrisii
ENSXMAG00000029339	-	100	77.226	ENSSFOG00015019353	celf1	93	77.433	Scleropages_formosus
ENSXMAG00000029339	-	100	81.780	ENSSMAG00000013827	celf1	94	81.992	Scophthalmus_maximus
ENSXMAG00000029339	-	100	79.339	ENSSDUG00000011558	celf1	93	79.261	Seriola_dumerili
ENSXMAG00000029339	-	100	81.568	ENSSLDG00000012863	celf1	100	81.780	Seriola_lalandi_dorsalis
ENSXMAG00000029339	-	100	67.351	ENSSARG00000003207	CELF1	100	68.583	Sorex_araneus
ENSXMAG00000029339	-	100	71.805	ENSSPUG00000004228	CELF1	95	72.653	Sphenodon_punctatus
ENSXMAG00000029339	-	100	77.848	ENSSPAG00000009569	celf1	100	79.065	Stegastes_partitus
ENSXMAG00000029339	-	100	72.117	ENSSSCG00000013233	CELF1	100	73.101	Sus_scrofa
ENSXMAG00000029339	-	100	72.358	ENSTGUG00000010377	CELF1	95	73.620	Taeniopygia_guttata
ENSXMAG00000029339	-	100	61.795	ENSTRUG00000000617	celf1	100	60.000	Takifugu_rubripes
ENSXMAG00000029339	-	80	86.093	ENSTBEG00000005140	CELF1	79	86.093	Tupaia_belangeri
ENSXMAG00000029339	-	100	71.869	ENSTTRG00000014157	CELF1	100	73.101	Tursiops_truncatus
ENSXMAG00000029339	-	89	68.879	ENSUAMG00000000223	CELF1	94	70.252	Ursus_americanus
ENSXMAG00000029339	-	100	71.869	ENSUMAG00000009218	CELF1	95	73.101	Ursus_maritimus
ENSXMAG00000029339	-	80	92.135	ENSVPAG00000000336	CELF1	82	92.135	Vicugna_pacos
ENSXMAG00000029339	-	100	71.869	ENSVVUG00000023439	CELF1	100	73.101	Vulpes_vulpes
ENSXMAG00000029339	-	100	71.602	ENSXETG00000009044	celf1	100	71.197	Xenopus_tropicalis
ENSXMAG00000029339	-	88	73.926	ENSXCOG00000017706	-	87	73.926	Xiphophorus_couchianus