EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000029601 (Gene tree)
Gene ID: 102233049
Gene Symbol: -
Alias: -
Full Name: ADP-ribosylation factor 1-like
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 11309 bases
Position: chr20:3017960-3029268
Accession: 102233049
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000039759	MMR_HSR1	PF01926.23	9.9e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000028666	-	1332	XM_023324501	ENSXMAP00000039759	179 (aa)	XP_023180269	UPI000C6D78BA

Gene Model

Click here to download ENSXMAG00000029601's gene model file

Pathways

Pathway ID	Pathway Name	Source
xma04144	Endocytosis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000029601's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000029601	-	100	87.151	ENSAPEG00000002838	-	100	87.151	Amphiprion_percula
ENSXMAG00000029601	-	94	79.290	ENSATEG00000003808	-	96	79.290	Anabas_testudineus
ENSXMAG00000029601	-	99	87.079	ENSATEG00000003847	-	99	87.079	Anabas_testudineus
ENSXMAG00000029601	-	95	84.706	ENSACLG00000009822	-	91	84.706	Astatotilapia_calliptera
ENSXMAG00000029601	-	82	77.551	ENSCVAG00000013902	-	90	77.551	Cyprinodon_variegatus
ENSXMAG00000029601	-	88	89.172	ENSFHEG00000019659	-	89	89.172	Fundulus_heteroclitus
ENSXMAG00000029601	-	62	98.198	ENSGAFG00000002801	-	98	98.198	Gambusia_affinis
ENSXMAG00000029601	-	99	89.385	ENSGACG00000003831	-	99	89.385	Gasterosteus_aculeatus
ENSXMAG00000029601	-	100	82.123	ENSHBUG00000001250	-	100	82.123	Haplochromis_burtoni
ENSXMAG00000029601	-	98	86.364	ENSLBEG00000027205	-	99	86.364	Labrus_bergylta
ENSXMAG00000029601	-	100	83.799	ENSMAMG00000013955	-	100	83.799	Mastacembelus_armatus
ENSXMAG00000029601	-	100	83.799	ENSMZEG00005016274	-	100	83.799	Maylandia_zebra
ENSXMAG00000029601	-	100	83.799	ENSMZEG00005016277	-	100	83.799	Maylandia_zebra
ENSXMAG00000029601	-	100	82.682	ENSMMOG00000013651	-	99	82.682	Mola_mola
ENSXMAG00000029601	-	100	82.123	ENSONIG00000004340	-	100	82.123	Oreochromis_niloticus
ENSXMAG00000029601	-	100	97.765	ENSPLAG00000015887	-	100	97.765	Poecilia_latipinna
ENSXMAG00000029601	-	100	97.765	ENSPMEG00000007064	-	100	97.765	Poecilia_mexicana
ENSXMAG00000029601	-	96	97.661	ENSPREG00000000912	-	100	97.661	Poecilia_reticulata
ENSXMAG00000029601	-	100	74.762	ENSSMAG00000002487	-	100	74.762	Scophthalmus_maximus
ENSXMAG00000029601	-	100	85.475	ENSSDUG00000020599	-	100	85.475	Seriola_dumerili
ENSXMAG00000029601	-	100	86.592	ENSSLDG00000020097	-	100	86.592	Seriola_lalandi_dorsalis
ENSXMAG00000029601	-	100	85.475	ENSSPAG00000017484	-	100	85.475	Stegastes_partitus
ENSXMAG00000029601	-	89	76.730	ENSTRUG00000025171	-	98	76.730	Takifugu_rubripes
ENSXMAG00000029601	-	82	77.027	ENSTNIG00000018302	-	78	69.101	Tetraodon_nigroviridis
ENSXMAG00000029601	-	63	81.250	ENSTNIG00000005043	-	99	81.250	Tetraodon_nigroviridis
ENSXMAG00000029601	-	88	75.796	ENSTNIG00000000796	-	78	71.186	Tetraodon_nigroviridis
ENSXMAG00000029601	-	82	79.592	ENSTNIG00000001632	-	78	71.186	Tetraodon_nigroviridis