EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000029788 (Gene tree)
Gene ID: 102234983
Gene Symbol: srp19
Alias: zgc:63961
Full Name: signal recognition particle 19
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Minus strand
Length: 6611 bases
Position: chr12:2035095-2041705
Accession: 102234983
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000041111	SRP19	PF01922.17	6.6e-29	1	1
ENSXMAP00000029851	SRP19	PF01922.17	9.5e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000042318	-	3067	XM_005809718	ENSXMAP00000041111	141 (aa)	XP_005809775	UPI0003B522D9
ENSXMAT00000031663	-	483	-	ENSXMAP00000029851	160 (aa)	-	-

Gene Model

Click here to download ENSXMAG00000029788's gene model file

Pathways

Pathway ID	Pathway Name	Source
xma03060	Protein export	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000029788's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000029788	srp19	89	71.654	ENSG00000153037	SRP19	98	66.667	Homo_sapiens
ENSXMAG00000029788	srp19	94	93.985	ENSAPOG00000002199	srp19	94	93.985	Acanthochromis_polyacanthus
ENSXMAG00000029788	srp19	89	72.441	ENSAMEG00000012623	SRP19	90	70.455	Ailuropoda_melanoleuca
ENSXMAG00000029788	srp19	94	88.722	ENSACIG00000005082	srp19	94	88.722	Amphilophus_citrinellus
ENSXMAG00000029788	srp19	94	93.233	ENSAOCG00000002718	srp19	94	93.233	Amphiprion_ocellaris
ENSXMAG00000029788	srp19	94	92.481	ENSAPEG00000022170	srp19	94	92.481	Amphiprion_percula
ENSXMAG00000029788	srp19	94	92.481	ENSATEG00000012472	srp19	94	92.481	Anabas_testudineus
ENSXMAG00000029788	srp19	79	69.643	ENSAPLG00000002624	SRP19	92	70.175	Anas_platyrhynchos
ENSXMAG00000029788	srp19	88	69.600	ENSACAG00000007550	SRP19	87	70.079	Anolis_carolinensis
ENSXMAG00000029788	srp19	90	53.125	ENSANAG00000030287	-	89	52.846	Aotus_nancymaae
ENSXMAG00000029788	srp19	89	71.654	ENSANAG00000032576	-	92	69.697	Aotus_nancymaae
ENSXMAG00000029788	srp19	84	60.000	ENSANAG00000029862	-	88	65.625	Aotus_nancymaae
ENSXMAG00000029788	srp19	94	84.962	ENSACLG00000006259	srp19	94	84.962	Astatotilapia_calliptera
ENSXMAG00000029788	srp19	93	83.969	ENSAMXG00000043011	srp19	94	84.211	Astyanax_mexicanus
ENSXMAG00000029788	srp19	89	70.866	ENSBTAG00000012803	SRP19	92	68.939	Bos_taurus
ENSXMAG00000029788	srp19	79	47.788	WBGene00018159	F37F2.2	96	44.526	Caenorhabditis_elegans
ENSXMAG00000029788	srp19	86	51.639	ENSCJAG00000045531	-	80	51.587	Callithrix_jacchus
ENSXMAG00000029788	srp19	89	72.441	ENSCJAG00000038676	-	90	66.667	Callithrix_jacchus
ENSXMAG00000029788	srp19	89	70.866	ENSCAFG00000031549	SRP19	92	69.697	Canis_familiaris
ENSXMAG00000029788	srp19	65	69.565	ENSCAFG00020004285	-	85	70.526	Canis_lupus_dingo
ENSXMAG00000029788	srp19	84	70.833	ENSCAFG00020022437	-	92	71.545	Canis_lupus_dingo
ENSXMAG00000029788	srp19	89	70.866	ENSCAFG00020014267	-	92	69.697	Canis_lupus_dingo
ENSXMAG00000029788	srp19	89	70.866	ENSCHIG00000017551	SRP19	92	68.939	Capra_hircus
ENSXMAG00000029788	srp19	89	71.654	ENSTSYG00000007875	SRP19	92	69.697	Carlito_syrichta
ENSXMAG00000029788	srp19	81	59.829	ENSCPOG00000036806	SRP19	92	58.197	Cavia_porcellus
ENSXMAG00000029788	srp19	87	54.032	ENSCCAG00000023426	-	85	53.435	Cebus_capucinus
ENSXMAG00000029788	srp19	87	52.419	ENSCCAG00000029821	-	65	51.908	Cebus_capucinus
ENSXMAG00000029788	srp19	89	71.654	ENSCCAG00000035651	-	92	69.697	Cebus_capucinus
ENSXMAG00000029788	srp19	89	66.142	ENSCATG00000039250	-	91	65.152	Cercocebus_atys
ENSXMAG00000029788	srp19	87	60.163	ENSCATG00000040513	-	77	60.800	Cercocebus_atys
ENSXMAG00000029788	srp19	89	71.429	ENSCLAG00000004791	-	92	68.182	Chinchilla_lanigera
ENSXMAG00000029788	srp19	89	66.667	ENSCLAG00000016055	-	91	63.636	Chinchilla_lanigera
ENSXMAG00000029788	srp19	89	71.654	ENSCHOG00000013452	SRP19	92	69.697	Choloepus_hoffmanni
ENSXMAG00000029788	srp19	93	65.909	ENSCPBG00000013903	SRP19	94	66.418	Chrysemys_picta_bellii
ENSXMAG00000029788	srp19	89	70.079	ENSCGRG00001020510	Srp19	92	68.182	Cricetulus_griseus_chok1gshd
ENSXMAG00000029788	srp19	67	69.000	ENSCGRG00000010716	-	88	69.000	Cricetulus_griseus_crigri
ENSXMAG00000029788	srp19	84	64.706	ENSCGRG00000008542	-	91	64.706	Cricetulus_griseus_crigri
ENSXMAG00000029788	srp19	94	85.714	ENSCSEG00000010039	srp19	94	85.714	Cynoglossus_semilaevis
ENSXMAG00000029788	srp19	94	93.985	ENSCVAG00000017621	srp19	94	93.985	Cyprinodon_variegatus
ENSXMAG00000029788	srp19	93	82.443	ENSDARG00000035699	srp19	94	82.707	Danio_rerio
ENSXMAG00000029788	srp19	89	71.654	ENSDNOG00000013856	SRP19	92	69.697	Dasypus_novemcinctus
ENSXMAG00000029788	srp19	69	71.429	ENSDORG00000004746	Srp19	77	71.429	Dipodomys_ordii
ENSXMAG00000029788	srp19	87	51.639	FBgn0015298	Srp19	75	51.639	Drosophila_melanogaster
ENSXMAG00000029788	srp19	89	71.654	ENSETEG00000017132	SRP19	88	71.654	Echinops_telfairi
ENSXMAG00000029788	srp19	90	70.866	ENSEBUG00000006613	srp19	94	70.677	Eptatretus_burgeri
ENSXMAG00000029788	srp19	89	71.654	ENSEASG00005015182	SRP19	92	69.697	Equus_asinus_asinus
ENSXMAG00000029788	srp19	89	70.079	ENSEEUG00000007298	SRP19	92	68.182	Erinaceus_europaeus
ENSXMAG00000029788	srp19	94	76.692	ENSELUG00000004594	srp19	94	76.692	Esox_lucius
ENSXMAG00000029788	srp19	93	86.260	ENSELUG00000007958	srp19	94	86.466	Esox_lucius
ENSXMAG00000029788	srp19	89	71.654	ENSFCAG00000025895	SRP19	92	69.697	Felis_catus
ENSXMAG00000029788	srp19	89	69.291	ENSFDAG00000013543	SRP19	92	67.424	Fukomys_damarensis
ENSXMAG00000029788	srp19	94	94.737	ENSFHEG00000000493	srp19	94	94.737	Fundulus_heteroclitus
ENSXMAG00000029788	srp19	85	84.167	ENSGMOG00000003264	srp19	94	84.167	Gadus_morhua
ENSXMAG00000029788	srp19	89	70.635	ENSGALG00000000218	SRP19	92	69.173	Gallus_gallus
ENSXMAG00000029788	srp19	99	92.857	ENSGAFG00000015815	srp19	68	92.857	Gambusia_affinis
ENSXMAG00000029788	srp19	94	89.474	ENSGACG00000001093	srp19	90	89.474	Gasterosteus_aculeatus
ENSXMAG00000029788	srp19	93	65.909	ENSGAGG00000025305	SRP19	94	66.418	Gopherus_agassizii
ENSXMAG00000029788	srp19	90	81.250	ENSHBUG00000006131	srp19	90	81.250	Haplochromis_burtoni
ENSXMAG00000029788	srp19	89	69.291	ENSHGLG00000006075	SRP19	92	67.424	Heterocephalus_glaber_female
ENSXMAG00000029788	srp19	89	69.291	ENSHGLG00100015859	SRP19	92	67.424	Heterocephalus_glaber_male
ENSXMAG00000029788	srp19	94	83.459	ENSHCOG00000013231	srp19	94	83.459	Hippocampus_comes
ENSXMAG00000029788	srp19	93	83.969	ENSIPUG00000025084	srp19	94	84.211	Ictalurus_punctatus
ENSXMAG00000029788	srp19	91	70.543	ENSSTOG00000000348	SRP19	92	69.697	Ictidomys_tridecemlineatus
ENSXMAG00000029788	srp19	89	70.866	ENSJJAG00000017185	Srp19	92	68.939	Jaculus_jaculus
ENSXMAG00000029788	srp19	94	93.233	ENSKMAG00000011155	srp19	94	93.233	Kryptolebias_marmoratus
ENSXMAG00000029788	srp19	94	90.977	ENSLBEG00000026727	srp19	94	90.977	Labrus_bergylta
ENSXMAG00000029788	srp19	93	71.212	ENSLACG00000004459	SRP19	87	71.642	Latimeria_chalumnae
ENSXMAG00000029788	srp19	93	79.389	ENSLOCG00000010302	srp19	94	79.699	Lepisosteus_oculatus
ENSXMAG00000029788	srp19	89	70.079	ENSLAFG00000002564	SRP19	92	68.182	Loxodonta_africana
ENSXMAG00000029788	srp19	84	66.387	ENSMFAG00000000554	-	96	61.194	Macaca_fascicularis
ENSXMAG00000029788	srp19	84	52.941	ENSMFAG00000040055	-	90	53.719	Macaca_fascicularis
ENSXMAG00000029788	srp19	84	67.227	ENSMMUG00000049186	-	96	61.940	Macaca_mulatta
ENSXMAG00000029788	srp19	87	59.350	ENSMMUG00000032515	-	92	60.000	Macaca_mulatta
ENSXMAG00000029788	srp19	84	52.101	ENSMNEG00000040117	-	90	52.893	Macaca_nemestrina
ENSXMAG00000029788	srp19	89	71.654	ENSMNEG00000038714	SRP19	92	69.697	Macaca_nemestrina
ENSXMAG00000029788	srp19	94	93.985	ENSMAMG00000018346	srp19	94	93.985	Mastacembelus_armatus
ENSXMAG00000029788	srp19	94	84.962	ENSMZEG00005001765	srp19	94	84.962	Maylandia_zebra
ENSXMAG00000029788	srp19	84	70.000	ENSMGAG00000006762	SRP19	93	70.492	Meleagris_gallopavo
ENSXMAG00000029788	srp19	65	65.591	ENSMICG00000049202	-	86	66.667	Microcebus_murinus
ENSXMAG00000029788	srp19	89	69.291	ENSMICG00000000399	SRP19	92	67.424	Microcebus_murinus
ENSXMAG00000029788	srp19	89	71.654	ENSMOCG00000006534	Srp19	92	70.455	Microtus_ochrogaster
ENSXMAG00000029788	srp19	67	71.875	ENSMOCG00000010532	-	88	71.875	Microtus_ochrogaster
ENSXMAG00000029788	srp19	89	86.400	ENSMMOG00000010417	srp19	92	77.465	Mola_mola
ENSXMAG00000029788	srp19	93	70.455	ENSMODG00000013278	SRP19	94	70.896	Monodelphis_domestica
ENSXMAG00000029788	srp19	94	93.233	ENSMALG00000003858	srp19	94	93.233	Monopterus_albus
ENSXMAG00000029788	srp19	89	73.228	MGP_CAROLIEiJ_G0022086	Srp19	92	71.212	Mus_caroli
ENSXMAG00000029788	srp19	89	73.228	ENSMUSG00000014504	Srp19	92	71.212	Mus_musculus
ENSXMAG00000029788	srp19	89	72.441	MGP_PahariEiJ_G0018820	Srp19	92	70.455	Mus_pahari
ENSXMAG00000029788	srp19	89	73.228	MGP_SPRETEiJ_G0022998	Srp19	92	71.212	Mus_spretus
ENSXMAG00000029788	srp19	89	72.441	ENSMPUG00000012695	SRP19	90	70.455	Mustela_putorius_furo
ENSXMAG00000029788	srp19	87	66.129	ENSMLUG00000024549	-	91	66.667	Myotis_lucifugus
ENSXMAG00000029788	srp19	89	70.079	ENSMLUG00000014793	-	92	68.182	Myotis_lucifugus
ENSXMAG00000029788	srp19	89	70.866	ENSNGAG00000003440	-	92	68.939	Nannospalax_galili
ENSXMAG00000029788	srp19	87	64.516	ENSNGAG00000014524	-	98	63.281	Nannospalax_galili
ENSXMAG00000029788	srp19	89	62.698	ENSNLEG00000035364	-	88	66.667	Nomascus_leucogenys
ENSXMAG00000029788	srp19	84	71.429	ENSMEUG00000012529	SRP19	93	71.901	Notamacropus_eugenii
ENSXMAG00000029788	srp19	82	70.940	ENSOPRG00000010549	SRP19	93	71.074	Ochotona_princeps
ENSXMAG00000029788	srp19	87	57.724	ENSODEG00000013862	-	91	56.716	Octodon_degus
ENSXMAG00000029788	srp19	67	70.833	ENSODEG00000005538	-	84	70.833	Octodon_degus
ENSXMAG00000029788	srp19	87	66.129	ENSODEG00000019119	-	92	64.394	Octodon_degus
ENSXMAG00000029788	srp19	94	84.962	ENSONIG00000000542	srp19	94	84.962	Oreochromis_niloticus
ENSXMAG00000029788	srp19	93	67.424	ENSOANG00000011139	SRP19	77	67.910	Ornithorhynchus_anatinus
ENSXMAG00000029788	srp19	89	70.312	ENSOCUG00000015639	SRP19	92	69.173	Oryctolagus_cuniculus
ENSXMAG00000029788	srp19	94	89.474	ENSORLG00000028267	srp19	95	89.474	Oryzias_latipes
ENSXMAG00000029788	srp19	94	89.474	ENSORLG00020015201	srp19	95	89.474	Oryzias_latipes_hni
ENSXMAG00000029788	srp19	94	89.474	ENSORLG00015007525	srp19	95	89.474	Oryzias_latipes_hsok
ENSXMAG00000029788	srp19	94	87.218	ENSOMEG00000009178	srp19	95	87.218	Oryzias_melastigma
ENSXMAG00000029788	srp19	89	70.866	ENSOGAG00000008579	SRP19	92	68.939	Otolemur_garnettii
ENSXMAG00000029788	srp19	89	70.079	ENSOARG00000016066	SRP19	92	68.182	Ovis_aries
ENSXMAG00000029788	srp19	89	71.654	ENSPPAG00000037062	SRP19	92	69.697	Pan_paniscus
ENSXMAG00000029788	srp19	89	71.654	ENSPPRG00000015591	SRP19	92	69.697	Panthera_pardus
ENSXMAG00000029788	srp19	89	71.654	ENSPTIG00000021474	SRP19	92	69.697	Panthera_tigris_altaica
ENSXMAG00000029788	srp19	89	71.654	ENSPTRG00000017136	SRP19	92	69.697	Pan_troglodytes
ENSXMAG00000029788	srp19	89	71.654	ENSPANG00000004370	-	92	69.697	Papio_anubis
ENSXMAG00000029788	srp19	89	65.354	ENSPANG00000034740	-	91	64.394	Papio_anubis
ENSXMAG00000029788	srp19	94	76.692	ENSPKIG00000018671	srp19	94	76.692	Paramormyrops_kingsleyae
ENSXMAG00000029788	srp19	84	65.833	ENSPSIG00000013811	SRP19	93	66.393	Pelodiscus_sinensis
ENSXMAG00000029788	srp19	94	88.722	ENSPMGG00000015313	srp19	94	88.722	Periophthalmus_magnuspinnatus
ENSXMAG00000029788	srp19	85	72.727	ENSPEMG00000004412	-	90	71.545	Peromyscus_maniculatus_bairdii
ENSXMAG00000029788	srp19	95	63.433	ENSPMAG00000002685	srp19	93	64.885	Petromyzon_marinus
ENSXMAG00000029788	srp19	93	69.697	ENSPCIG00000010250	SRP19	93	70.149	Phascolarctos_cinereus
ENSXMAG00000029788	srp19	100	98.582	ENSPFOG00000015887	srp19	100	98.582	Poecilia_formosa
ENSXMAG00000029788	srp19	100	98.582	ENSPLAG00000007784	srp19	100	98.582	Poecilia_latipinna
ENSXMAG00000029788	srp19	100	97.872	ENSPMEG00000003056	srp19	100	97.872	Poecilia_mexicana
ENSXMAG00000029788	srp19	100	98.582	ENSPREG00000017307	srp19	99	98.582	Poecilia_reticulata
ENSXMAG00000029788	srp19	89	71.654	ENSPPYG00000029584	SRP19	90	69.697	Pongo_abelii
ENSXMAG00000029788	srp19	67	70.526	ENSPCAG00000000228	SRP19	66	70.526	Procavia_capensis
ENSXMAG00000029788	srp19	89	70.866	ENSPCOG00000023239	SRP19	92	68.939	Propithecus_coquereli
ENSXMAG00000029788	srp19	89	70.866	ENSPVAG00000004895	SRP19	92	68.939	Pteropus_vampyrus
ENSXMAG00000029788	srp19	93	85.606	ENSPNAG00000009392	srp19	94	85.821	Pygocentrus_nattereri
ENSXMAG00000029788	srp19	89	72.441	ENSRNOG00000020204	Srp19	92	70.455	Rattus_norvegicus
ENSXMAG00000029788	srp19	89	71.654	ENSRBIG00000015627	-	92	69.697	Rhinopithecus_bieti
ENSXMAG00000029788	srp19	89	64.000	ENSRBIG00000040440	-	92	62.879	Rhinopithecus_bieti
ENSXMAG00000029788	srp19	52	64.000	ENSRBIG00000031651	-	83	64.000	Rhinopithecus_bieti
ENSXMAG00000029788	srp19	89	64.000	ENSRROG00000037054	-	92	62.879	Rhinopithecus_roxellana
ENSXMAG00000029788	srp19	87	55.645	ENSRROG00000037316	-	91	56.557	Rhinopithecus_roxellana
ENSXMAG00000029788	srp19	91	52.713	ENSSBOG00000032685	-	85	61.053	Saimiri_boliviensis_boliviensis
ENSXMAG00000029788	srp19	89	71.654	ENSSBOG00000028071	-	92	69.697	Saimiri_boliviensis_boliviensis
ENSXMAG00000029788	srp19	94	83.459	ENSSFOG00015022139	srp19	94	83.459	Scleropages_formosus
ENSXMAG00000029788	srp19	94	89.474	ENSSMAG00000016803	srp19	94	89.474	Scophthalmus_maximus
ENSXMAG00000029788	srp19	94	79.167	ENSSDUG00000012930	srp19	94	79.167	Seriola_dumerili
ENSXMAG00000029788	srp19	86	58.537	ENSSLDG00000021916	-	70	69.072	Seriola_lalandi_dorsalis
ENSXMAG00000029788	srp19	89	70.079	ENSSARG00000000615	SRP19	88	70.079	Sorex_araneus
ENSXMAG00000029788	srp19	87	72.358	ENSSPUG00000015769	SRP19	92	70.677	Sphenodon_punctatus
ENSXMAG00000029788	srp19	89	70.866	ENSSSCG00000026230	SRP19	92	68.939	Sus_scrofa
ENSXMAG00000029788	srp19	87	70.732	ENSTGUG00000001019	SRP19	88	71.094	Taeniopygia_guttata
ENSXMAG00000029788	srp19	94	87.591	ENSTRUG00000023119	srp19	94	87.591	Takifugu_rubripes
ENSXMAG00000029788	srp19	94	89.474	ENSTNIG00000018880	srp19	94	89.474	Tetraodon_nigroviridis
ENSXMAG00000029788	srp19	89	70.079	ENSTTRG00000001690	SRP19	92	68.182	Tursiops_truncatus
ENSXMAG00000029788	srp19	87	71.774	ENSUAMG00000000111	SRP19	92	70.455	Ursus_americanus
ENSXMAG00000029788	srp19	89	72.441	ENSUMAG00000016997	SRP19	92	70.455	Ursus_maritimus
ENSXMAG00000029788	srp19	89	71.654	ENSVPAG00000006001	SRP19	92	69.697	Vicugna_pacos
ENSXMAG00000029788	srp19	69	71.429	ENSVVUG00000012423	SRP19	87	77.941	Vulpes_vulpes
ENSXMAG00000029788	srp19	86	70.492	ENSXETG00000011993	srp19	86	70.492	Xenopus_tropicalis
ENSXMAG00000029788	srp19	74	99.160	ENSXCOG00000012530	srp19	86	99.160	Xiphophorus_couchianus