EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000029823 (Gene tree)
Gene ID: 102237355
Gene Symbol: RAB29
Alias: RAB7L|RAB7L1
Full Name: RAB29%2C member RAS oncogene family
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 6967 bases
Position: chr1:29797792-29804758
Accession: 102237355
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000009321	MMR_HSR1	PF01926.23	7.2e-06	1	1
ENSXMAP00000025049	MMR_HSR1	PF01926.23	7.2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000034916	RAB29-201	3640	-	ENSXMAP00000025049	206 (aa)	-	UPI0006D90F98
ENSXMAT00000009335	RAB29-202	2820	XM_014469813	ENSXMAP00000009321	206 (aa)	XP_014325299	M4A4C7

Gene Model

Click here to download ENSXMAG00000029823's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000029823's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000029823	RAB29	100	73.786	ENSATEG00000024739	RAB29	100	73.786	Anabas_testudineus
ENSXMAG00000029823	RAB29	80	81.818	ENSACLG00000008602	RAB29	100	81.818	Astatotilapia_calliptera
ENSXMAG00000029823	RAB29	100	77.670	ENSCVAG00000014038	RAB29	100	77.670	Cyprinodon_variegatus
ENSXMAG00000029823	RAB29	82	54.167	ENSEBUG00000002259	RAB29	81	54.167	Eptatretus_burgeri
ENSXMAG00000029823	RAB29	87	75.000	ENSFHEG00000015993	RAB29	88	75.000	Fundulus_heteroclitus
ENSXMAG00000029823	RAB29	80	73.171	ENSGMOG00000018475	RAB29	99	73.171	Gadus_morhua
ENSXMAG00000029823	RAB29	100	91.748	ENSGAFG00000000629	RAB29	100	91.748	Gambusia_affinis
ENSXMAG00000029823	RAB29	100	68.447	ENSGACG00000010473	RAB29	99	68.447	Gasterosteus_aculeatus
ENSXMAG00000029823	RAB29	100	74.396	ENSHBUG00000012594	RAB29	100	74.396	Haplochromis_burtoni
ENSXMAG00000029823	RAB29	97	72.500	ENSKMAG00000017150	-	90	72.500	Kryptolebias_marmoratus
ENSXMAG00000029823	RAB29	100	72.330	ENSLBEG00000006152	-	100	72.330	Labrus_bergylta
ENSXMAG00000029823	RAB29	100	72.330	ENSLBEG00000018812	RAB29	100	72.330	Labrus_bergylta
ENSXMAG00000029823	RAB29	99	52.941	ENSLACG00000002523	RAB29	98	52.941	Latimeria_chalumnae
ENSXMAG00000029823	RAB29	100	73.301	ENSMAMG00000006963	RAB29	100	73.301	Mastacembelus_armatus
ENSXMAG00000029823	RAB29	100	73.430	ENSMZEG00005026799	RAB29	100	73.430	Maylandia_zebra
ENSXMAG00000029823	RAB29	99	75.490	ENSMALG00000018436	RAB29	89	75.490	Monopterus_albus
ENSXMAG00000029823	RAB29	81	79.641	ENSNBRG00000008714	RAB29	73	79.641	Neolamprologus_brichardi
ENSXMAG00000029823	RAB29	100	74.038	ENSONIG00000014892	RAB29	100	74.038	Oreochromis_niloticus
ENSXMAG00000029823	RAB29	100	70.874	ENSORLG00000027892	RAB29	100	70.874	Oryzias_latipes
ENSXMAG00000029823	RAB29	100	68.932	ENSORLG00020005240	RAB29	100	68.932	Oryzias_latipes_hni
ENSXMAG00000029823	RAB29	100	69.903	ENSORLG00015020441	-	100	69.903	Oryzias_latipes_hsok
ENSXMAG00000029823	RAB29	100	71.359	ENSOMEG00000000336	RAB29	100	71.359	Oryzias_melastigma
ENSXMAG00000029823	RAB29	100	68.447	ENSPMGG00000008290	-	100	68.447	Periophthalmus_magnuspinnatus
ENSXMAG00000029823	RAB29	100	85.437	ENSPFOG00000013066	RAB29	99	85.437	Poecilia_formosa
ENSXMAG00000029823	RAB29	100	83.495	ENSPLAG00000002600	RAB29	97	83.495	Poecilia_latipinna
ENSXMAG00000029823	RAB29	100	85.922	ENSPMEG00000021807	RAB29	100	85.922	Poecilia_mexicana
ENSXMAG00000029823	RAB29	100	86.408	ENSPREG00000020276	RAB29	100	86.408	Poecilia_reticulata
ENSXMAG00000029823	RAB29	100	73.430	ENSPNYG00000015355	RAB29	100	73.430	Pundamilia_nyererei
ENSXMAG00000029823	RAB29	100	71.014	ENSSDUG00000006543	RAB29	100	71.014	Seriola_dumerili
ENSXMAG00000029823	RAB29	99	50.000	ENSSPUG00000015007	RAB29	98	50.000	Sphenodon_punctatus
ENSXMAG00000029823	RAB29	100	72.330	ENSSPAG00000002062	RAB29	100	72.330	Stegastes_partitus
ENSXMAG00000029823	RAB29	100	97.573	ENSXCOG00000016370	RAB29	100	97.573	Xiphophorus_couchianus