EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000029887 (Gene tree)
Gene ID: 102232126
Gene Symbol: si:ch1073-335m2.2
Alias: -
Full Name: msx2-interacting protein-like
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Minus strand
Length: 18586 bases
Position: chr20:18382203-18400788
Accession: 102232126
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000028503	RRM_1	PF00076.22	1.9e-41	1	3
ENSXMAP00000028503	RRM_1	PF00076.22	1.9e-41	2	3
ENSXMAP00000028503	RRM_1	PF00076.22	1.9e-41	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000029941	-	9814	XM_023324984	ENSXMAP00000028503	3137 (aa)	XP_023180752	UPI000C6E9515

Gene Model

Click here to download ENSXMAG00000029887's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000029887's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000029887	si:ch1073-335m2.2	77	83.432	ENSG00000065526	SPEN	85	80.080	Homo_sapiens
ENSXMAG00000029887	si:ch1073-335m2.2	99	79.651	ENSAPOG00000009853	-	93	76.650	Acanthochromis_polyacanthus
ENSXMAG00000029887	si:ch1073-335m2.2	100	73.649	ENSAPOG00000011411	si:ch1073-335m2.2	100	73.849	Acanthochromis_polyacanthus
ENSXMAG00000029887	si:ch1073-335m2.2	77	84.024	ENSAMEG00000011817	SPEN	73	59.516	Ailuropoda_melanoleuca
ENSXMAG00000029887	si:ch1073-335m2.2	99	79.651	ENSAOCG00000014505	-	93	76.650	Amphiprion_ocellaris
ENSXMAG00000029887	si:ch1073-335m2.2	89	71.616	ENSAOCG00000008077	si:ch1073-335m2.2	99	71.740	Amphiprion_ocellaris
ENSXMAG00000029887	si:ch1073-335m2.2	99	79.651	ENSAPEG00000010288	-	93	76.650	Amphiprion_percula
ENSXMAG00000029887	si:ch1073-335m2.2	100	73.652	ENSAPEG00000013515	si:ch1073-335m2.2	100	73.760	Amphiprion_percula
ENSXMAG00000029887	si:ch1073-335m2.2	99	80.814	ENSATEG00000005627	-	97	79.144	Anabas_testudineus
ENSXMAG00000029887	si:ch1073-335m2.2	100	70.845	ENSATEG00000007674	si:ch1073-335m2.2	100	70.936	Anabas_testudineus
ENSXMAG00000029887	si:ch1073-335m2.2	95	84.615	ENSAPLG00000012618	SPEN	91	84.615	Anas_platyrhynchos
ENSXMAG00000029887	si:ch1073-335m2.2	72	84.615	ENSACAG00000013761	SPEN	70	84.615	Anolis_carolinensis
ENSXMAG00000029887	si:ch1073-335m2.2	76	83.432	ENSANAG00000034428	SPEN	71	83.432	Aotus_nancymaae
ENSXMAG00000029887	si:ch1073-335m2.2	100	70.403	ENSACLG00000021433	si:ch1073-335m2.2	100	70.157	Astatotilapia_calliptera
ENSXMAG00000029887	si:ch1073-335m2.2	99	77.838	ENSACLG00000016922	-	97	77.838	Astatotilapia_calliptera
ENSXMAG00000029887	si:ch1073-335m2.2	99	77.540	ENSAMXG00000012485	spen	92	77.540	Astyanax_mexicanus
ENSXMAG00000029887	si:ch1073-335m2.2	82	60.000	ENSBTAG00000018729	SPEN	75	60.000	Bos_taurus
ENSXMAG00000029887	si:ch1073-335m2.2	77	84.024	ENSCJAG00000008527	SPEN	60	84.024	Callithrix_jacchus
ENSXMAG00000029887	si:ch1073-335m2.2	70	47.453	ENSCAFG00000016132	-	75	47.780	Canis_familiaris
ENSXMAG00000029887	si:ch1073-335m2.2	90	60.000	ENSCHIG00000025070	SPEN	76	60.000	Capra_hircus
ENSXMAG00000029887	si:ch1073-335m2.2	56	84.024	ENSTSYG00000036016	SPEN	58	84.024	Carlito_syrichta
ENSXMAG00000029887	si:ch1073-335m2.2	77	84.024	ENSCCAG00000020258	SPEN	68	84.024	Cebus_capucinus
ENSXMAG00000029887	si:ch1073-335m2.2	77	84.024	ENSCATG00000015079	SPEN	71	84.024	Cercocebus_atys
ENSXMAG00000029887	si:ch1073-335m2.2	88	58.993	ENSCLAG00000002018	SPEN	96	58.993	Chinchilla_lanigera
ENSXMAG00000029887	si:ch1073-335m2.2	77	84.024	ENSCSAG00000000841	SPEN	69	84.024	Chlorocebus_sabaeus
ENSXMAG00000029887	si:ch1073-335m2.2	92	84.615	ENSCPBG00000010477	SPEN	85	84.615	Chrysemys_picta_bellii
ENSXMAG00000029887	si:ch1073-335m2.2	77	84.024	ENSCANG00000034547	SPEN	71	84.024	Colobus_angolensis_palliatus
ENSXMAG00000029887	si:ch1073-335m2.2	78	79.651	ENSCSEG00000003915	-	99	64.143	Cynoglossus_semilaevis
ENSXMAG00000029887	si:ch1073-335m2.2	100	81.736	ENSCVAG00000009075	si:ch1073-335m2.2	100	81.923	Cyprinodon_variegatus
ENSXMAG00000029887	si:ch1073-335m2.2	99	73.301	ENSDARG00000074245	spen	100	82.222	Danio_rerio
ENSXMAG00000029887	si:ch1073-335m2.2	100	52.729	ENSDARG00000074332	si:ch1073-335m2.2	100	52.916	Danio_rerio
ENSXMAG00000029887	si:ch1073-335m2.2	86	59.707	ENSDNOG00000041948	SPEN	60	59.707	Dasypus_novemcinctus
ENSXMAG00000029887	si:ch1073-335m2.2	85	84.024	ENSDORG00000023909	Spen	79	84.024	Dipodomys_ordii
ENSXMAG00000029887	si:ch1073-335m2.2	76	83.333	ENSEASG00005015911	SPEN	70	84.615	Equus_asinus_asinus
ENSXMAG00000029887	si:ch1073-335m2.2	77	84.615	ENSECAG00000008833	SPEN	70	84.615	Equus_caballus
ENSXMAG00000029887	si:ch1073-335m2.2	59	83.721	ENSEEUG00000010255	SPEN	58	83.721	Erinaceus_europaeus
ENSXMAG00000029887	si:ch1073-335m2.2	100	59.490	ENSELUG00000007726	si:ch1073-335m2.2	100	59.462	Esox_lucius
ENSXMAG00000029887	si:ch1073-335m2.2	80	84.024	ENSFALG00000003551	SPEN	84	84.024	Ficedula_albicollis
ENSXMAG00000029887	si:ch1073-335m2.2	76	82.456	ENSFDAG00000010212	SPEN	73	82.456	Fukomys_damarensis
ENSXMAG00000029887	si:ch1073-335m2.2	100	81.401	ENSFHEG00000004544	si:ch1073-335m2.2	100	81.552	Fundulus_heteroclitus
ENSXMAG00000029887	si:ch1073-335m2.2	100	62.439	ENSGMOG00000008156	si:ch1073-335m2.2	100	62.287	Gadus_morhua
ENSXMAG00000029887	si:ch1073-335m2.2	95	74.384	ENSGALG00000036932	SPEN	71	74.384	Gallus_gallus
ENSXMAG00000029887	si:ch1073-335m2.2	100	96.285	ENSGAFG00000021570	si:ch1073-335m2.2	100	96.285	Gambusia_affinis
ENSXMAG00000029887	si:ch1073-335m2.2	99	81.871	ENSGAFG00000015819	-	97	74.619	Gambusia_affinis
ENSXMAG00000029887	si:ch1073-335m2.2	72	78.919	ENSGACG00000005341	-	70	78.075	Gasterosteus_aculeatus
ENSXMAG00000029887	si:ch1073-335m2.2	100	67.794	ENSGACG00000001176	si:ch1073-335m2.2	100	67.754	Gasterosteus_aculeatus
ENSXMAG00000029887	si:ch1073-335m2.2	90	84.615	ENSGAGG00000020785	SPEN	66	84.615	Gopherus_agassizii
ENSXMAG00000029887	si:ch1073-335m2.2	77	83.432	ENSGGOG00000012041	SPEN	72	83.432	Gorilla_gorilla
ENSXMAG00000029887	si:ch1073-335m2.2	98	73.433	ENSHBUG00000023253	si:ch1073-335m2.2	100	70.366	Haplochromis_burtoni
ENSXMAG00000029887	si:ch1073-335m2.2	99	78.378	ENSHBUG00000020626	-	97	78.378	Haplochromis_burtoni
ENSXMAG00000029887	si:ch1073-335m2.2	66	59.712	ENSHGLG00100019294	SPEN	69	59.712	Heterocephalus_glaber_male
ENSXMAG00000029887	si:ch1073-335m2.2	96	65.847	ENSHCOG00000006004	si:ch1073-335m2.2	99	65.614	Hippocampus_comes
ENSXMAG00000029887	si:ch1073-335m2.2	100	73.711	ENSIPUG00000021668	spen	93	73.711	Ictalurus_punctatus
ENSXMAG00000029887	si:ch1073-335m2.2	96	53.627	ENSIPUG00000018212	si:ch1073-335m2.2	99	53.858	Ictalurus_punctatus
ENSXMAG00000029887	si:ch1073-335m2.2	89	60.073	ENSSTOG00000021428	SPEN	77	60.073	Ictidomys_tridecemlineatus
ENSXMAG00000029887	si:ch1073-335m2.2	100	74.627	ENSKMAG00000003882	-	98	74.627	Kryptolebias_marmoratus
ENSXMAG00000029887	si:ch1073-335m2.2	100	74.429	ENSKMAG00000021725	si:ch1073-335m2.2	100	74.198	Kryptolebias_marmoratus
ENSXMAG00000029887	si:ch1073-335m2.2	82	80.117	ENSLBEG00000019129	-	94	73.604	Labrus_bergylta
ENSXMAG00000029887	si:ch1073-335m2.2	100	69.817	ENSLBEG00000020855	si:ch1073-335m2.2	100	69.848	Labrus_bergylta
ENSXMAG00000029887	si:ch1073-335m2.2	94	84.024	ENSLACG00000003258	SPEN	89	84.024	Latimeria_chalumnae
ENSXMAG00000029887	si:ch1073-335m2.2	100	73.529	ENSLOCG00000007896	si:ch1073-335m2.2	89	75.862	Lepisosteus_oculatus
ENSXMAG00000029887	si:ch1073-335m2.2	77	84.024	ENSMFAG00000041974	SPEN	71	84.024	Macaca_fascicularis
ENSXMAG00000029887	si:ch1073-335m2.2	77	84.024	ENSMNEG00000042402	SPEN	71	84.024	Macaca_nemestrina
ENSXMAG00000029887	si:ch1073-335m2.2	77	84.024	ENSMLEG00000039293	SPEN	71	84.024	Mandrillus_leucophaeus
ENSXMAG00000029887	si:ch1073-335m2.2	100	71.088	ENSMAMG00000023870	si:ch1073-335m2.2	100	71.189	Mastacembelus_armatus
ENSXMAG00000029887	si:ch1073-335m2.2	88	77.838	ENSMZEG00005021491	-	96	77.838	Maylandia_zebra
ENSXMAG00000029887	si:ch1073-335m2.2	100	70.382	ENSMZEG00005011762	si:ch1073-335m2.2	100	70.197	Maylandia_zebra
ENSXMAG00000029887	si:ch1073-335m2.2	87	84.024	ENSMICG00000030994	SPEN	61	84.024	Microcebus_murinus
ENSXMAG00000029887	si:ch1073-335m2.2	87	84.024	ENSMOCG00000016083	Spen	81	84.024	Microtus_ochrogaster
ENSXMAG00000029887	si:ch1073-335m2.2	100	69.496	ENSMMOG00000021742	si:ch1073-335m2.2	100	69.163	Mola_mola
ENSXMAG00000029887	si:ch1073-335m2.2	90	79.882	ENSMODG00000003411	SPEN	83	79.882	Monodelphis_domestica
ENSXMAG00000029887	si:ch1073-335m2.2	99	80.233	ENSMALG00000008625	-	98	77.540	Monopterus_albus
ENSXMAG00000029887	si:ch1073-335m2.2	80	61.111	MGP_CAROLIEiJ_G0026745	Spen	76	61.111	Mus_caroli
ENSXMAG00000029887	si:ch1073-335m2.2	77	84.024	MGP_PahariEiJ_G0029076	Spen	88	84.024	Mus_pahari
ENSXMAG00000029887	si:ch1073-335m2.2	80	61.852	MGP_SPRETEiJ_G0027724	Spen	76	61.852	Mus_spretus
ENSXMAG00000029887	si:ch1073-335m2.2	75	84.024	ENSMPUG00000016317	SPEN	60	84.024	Mustela_putorius_furo
ENSXMAG00000029887	si:ch1073-335m2.2	94	59.298	ENSNGAG00000000641	Spen	96	59.298	Nannospalax_galili
ENSXMAG00000029887	si:ch1073-335m2.2	83	78.919	ENSNBRG00000022090	-	96	78.919	Neolamprologus_brichardi
ENSXMAG00000029887	si:ch1073-335m2.2	100	69.572	ENSNBRG00000005733	si:ch1073-335m2.2	100	69.326	Neolamprologus_brichardi
ENSXMAG00000029887	si:ch1073-335m2.2	76	78.947	ENSMEUG00000002422	SPEN	70	78.947	Notamacropus_eugenii
ENSXMAG00000029887	si:ch1073-335m2.2	59	75.124	ENSOPRG00000015800	SPEN	69	75.124	Ochotona_princeps
ENSXMAG00000029887	si:ch1073-335m2.2	99	59.058	ENSODEG00000016644	SPEN	95	59.058	Octodon_degus
ENSXMAG00000029887	si:ch1073-335m2.2	100	78.378	ENSONIG00000006573	-	98	78.378	Oreochromis_niloticus
ENSXMAG00000029887	si:ch1073-335m2.2	66	75.124	ENSOCUG00000010840	SPEN	63	75.124	Oryctolagus_cuniculus
ENSXMAG00000029887	si:ch1073-335m2.2	100	70.074	ENSORLG00000018414	si:ch1073-335m2.2	100	69.994	Oryzias_latipes
ENSXMAG00000029887	si:ch1073-335m2.2	87	38.396	ENSORLG00000028894	-	100	37.166	Oryzias_latipes
ENSXMAG00000029887	si:ch1073-335m2.2	100	69.929	ENSORLG00020009351	si:ch1073-335m2.2	100	69.829	Oryzias_latipes_hni
ENSXMAG00000029887	si:ch1073-335m2.2	93	63.885	ENSORLG00015022085	-	97	64.581	Oryzias_latipes_hsok
ENSXMAG00000029887	si:ch1073-335m2.2	100	69.827	ENSORLG00015005537	si:ch1073-335m2.2	100	69.758	Oryzias_latipes_hsok
ENSXMAG00000029887	si:ch1073-335m2.2	95	83.041	ENSOMEG00000007639	-	92	83.041	Oryzias_melastigma
ENSXMAG00000029887	si:ch1073-335m2.2	100	71.017	ENSOMEG00000004509	si:ch1073-335m2.2	100	71.172	Oryzias_melastigma
ENSXMAG00000029887	si:ch1073-335m2.2	65	84.024	ENSOGAG00000025110	SPEN	60	84.024	Otolemur_garnettii
ENSXMAG00000029887	si:ch1073-335m2.2	58	59.859	ENSOARG00000008477	SPEN	76	59.859	Ovis_aries
ENSXMAG00000029887	si:ch1073-335m2.2	76	83.432	ENSPPAG00000035690	SPEN	71	83.432	Pan_paniscus
ENSXMAG00000029887	si:ch1073-335m2.2	77	83.432	ENSPTRG00000000210	SPEN	72	83.432	Pan_troglodytes
ENSXMAG00000029887	si:ch1073-335m2.2	77	84.024	ENSPANG00000006293	SPEN	71	84.024	Papio_anubis
ENSXMAG00000029887	si:ch1073-335m2.2	100	77.720	ENSPKIG00000002617	SPEN	91	70.455	Paramormyrops_kingsleyae
ENSXMAG00000029887	si:ch1073-335m2.2	97	92.857	ENSPKIG00000010492	si:ch1073-335m2.2	98	92.857	Paramormyrops_kingsleyae
ENSXMAG00000029887	si:ch1073-335m2.2	55	84.615	ENSPSIG00000008026	SPEN	86	77.202	Pelodiscus_sinensis
ENSXMAG00000029887	si:ch1073-335m2.2	89	60.440	ENSPEMG00000022997	Spen	65	60.000	Peromyscus_maniculatus_bairdii
ENSXMAG00000029887	si:ch1073-335m2.2	100	94.684	ENSPFOG00000017986	si:ch1073-335m2.2	100	94.873	Poecilia_formosa
ENSXMAG00000029887	si:ch1073-335m2.2	100	95.024	ENSPLAG00000016625	si:ch1073-335m2.2	100	95.119	Poecilia_latipinna
ENSXMAG00000029887	si:ch1073-335m2.2	100	94.589	ENSPMEG00000002674	si:ch1073-335m2.2	100	94.905	Poecilia_mexicana
ENSXMAG00000029887	si:ch1073-335m2.2	99	75.635	ENSPMEG00000006764	-	97	75.635	Poecilia_mexicana
ENSXMAG00000029887	si:ch1073-335m2.2	99	75.635	ENSPREG00000010399	-	97	75.635	Poecilia_reticulata
ENSXMAG00000029887	si:ch1073-335m2.2	100	95.632	ENSPREG00000005357	si:ch1073-335m2.2	100	95.632	Poecilia_reticulata
ENSXMAG00000029887	si:ch1073-335m2.2	69	74.627	ENSPCAG00000009543	SPEN	66	74.129	Procavia_capensis
ENSXMAG00000029887	si:ch1073-335m2.2	87	80.588	ENSPCOG00000021735	SPEN	79	80.588	Propithecus_coquereli
ENSXMAG00000029887	si:ch1073-335m2.2	100	70.373	ENSPNYG00000009042	si:ch1073-335m2.2	100	70.188	Pundamilia_nyererei
ENSXMAG00000029887	si:ch1073-335m2.2	99	78.378	ENSPNYG00000012379	-	97	78.378	Pundamilia_nyererei
ENSXMAG00000029887	si:ch1073-335m2.2	100	55.476	ENSPNAG00000011452	si:ch1073-335m2.2	100	55.218	Pygocentrus_nattereri
ENSXMAG00000029887	si:ch1073-335m2.2	99	78.035	ENSPNAG00000020795	spen	92	72.727	Pygocentrus_nattereri
ENSXMAG00000029887	si:ch1073-335m2.2	76	84.024	ENSSBOG00000028770	SPEN	62	84.024	Saimiri_boliviensis_boliviensis
ENSXMAG00000029887	si:ch1073-335m2.2	92	71.287	ENSSHAG00000004960	SPEN	99	68.343	Sarcophilus_harrisii
ENSXMAG00000029887	si:ch1073-335m2.2	87	72.596	ENSSFOG00015007131	si:ch1073-335m2.2	98	72.596	Scleropages_formosus
ENSXMAG00000029887	si:ch1073-335m2.2	99	86.391	ENSSFOG00015010267	si:ch1073-335m2.2	98	86.391	Scleropages_formosus
ENSXMAG00000029887	si:ch1073-335m2.2	100	71.634	ENSSMAG00000000125	si:ch1073-335m2.2	100	71.682	Scophthalmus_maximus
ENSXMAG00000029887	si:ch1073-335m2.2	99	79.651	ENSSMAG00000008996	-	97	78.610	Scophthalmus_maximus
ENSXMAG00000029887	si:ch1073-335m2.2	99	80.814	ENSSDUG00000003476	-	98	77.665	Seriola_dumerili
ENSXMAG00000029887	si:ch1073-335m2.2	100	74.040	ENSSDUG00000008416	si:ch1073-335m2.2	100	74.040	Seriola_dumerili
ENSXMAG00000029887	si:ch1073-335m2.2	100	70.557	ENSSLDG00000023347	si:ch1073-335m2.2	100	70.610	Seriola_lalandi_dorsalis
ENSXMAG00000029887	si:ch1073-335m2.2	100	80.000	ENSSLDG00000012950	-	98	77.665	Seriola_lalandi_dorsalis
ENSXMAG00000029887	si:ch1073-335m2.2	61	84.615	ENSSPUG00000001866	-	89	84.615	Sphenodon_punctatus
ENSXMAG00000029887	si:ch1073-335m2.2	100	74.101	ENSSPAG00000012454	si:ch1073-335m2.2	100	74.132	Stegastes_partitus
ENSXMAG00000029887	si:ch1073-335m2.2	99	79.651	ENSSPAG00000006014	-	98	77.540	Stegastes_partitus
ENSXMAG00000029887	si:ch1073-335m2.2	69	47.417	ENSSSCG00000034484	SPEN	72	46.920	Sus_scrofa
ENSXMAG00000029887	si:ch1073-335m2.2	99	78.571	ENSTRUG00000024350	-	97	78.571	Takifugu_rubripes
ENSXMAG00000029887	si:ch1073-335m2.2	87	63.668	ENSTRUG00000021008	si:ch1073-335m2.2	100	63.343	Takifugu_rubripes
ENSXMAG00000029887	si:ch1073-335m2.2	99	79.121	ENSTNIG00000010907	-	97	71.292	Tetraodon_nigroviridis
ENSXMAG00000029887	si:ch1073-335m2.2	100	66.432	ENSTNIG00000014666	si:ch1073-335m2.2	100	66.361	Tetraodon_nigroviridis
ENSXMAG00000029887	si:ch1073-335m2.2	66	84.024	ENSTBEG00000003628	SPEN	59	84.024	Tupaia_belangeri
ENSXMAG00000029887	si:ch1073-335m2.2	71	84.024	ENSTTRG00000015704	SPEN	50	84.024	Tursiops_truncatus
ENSXMAG00000029887	si:ch1073-335m2.2	77	84.615	ENSUAMG00000009600	SPEN	73	60.000	Ursus_americanus
ENSXMAG00000029887	si:ch1073-335m2.2	76	84.615	ENSUMAG00000021641	SPEN	72	60.000	Ursus_maritimus
ENSXMAG00000029887	si:ch1073-335m2.2	77	84.024	ENSVVUG00000028951	SPEN	70	84.024	Vulpes_vulpes
ENSXMAG00000029887	si:ch1073-335m2.2	100	95.958	ENSXCOG00000004516	si:ch1073-335m2.2	100	95.958	Xiphophorus_couchianus
ENSXMAG00000029887	si:ch1073-335m2.2	99	81.287	ENSXMAG00000021384	-	97	74.619	Xiphophorus_maculatus