EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000030063 (Gene tree)
Gene ID: 102219630
Gene Symbol: aff3
Alias: id:ibd5053|si:dkey-19j7.2
Full Name: AF4/FMR2 family member 3
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 17706 bases
Position: chr7:11948814-11966519
Accession: 102219630
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000032139	AF-4	PF05110.13	9.2e-135	1	2
ENSXMAP00000032139	AF-4	PF05110.13	9.2e-135	2	2
ENSXMAP00000027254	AF-4	PF05110.13	1.2e-127	1	2
ENSXMAP00000027254	AF-4	PF05110.13	1.2e-127	2	2
ENSXMAP00000026566	AF-4	PF05110.13	1.5e-118	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000038126	-	4533	-	ENSXMAP00000027254	1209 (aa)	-	-
ENSXMAT00000042475	-	3906	-	ENSXMAP00000026566	1045 (aa)	-	-
ENSXMAT00000034462	-	4629	XM_014468437	ENSXMAP00000032139	1241 (aa)	XP_014323923	UPI000C6CA011

Gene Model

Click here to download ENSXMAG00000030063's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000030063's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000030063	aff3	98	62.277	ENSAPOG00000006031	aff3	100	64.441	Acanthochromis_polyacanthus
ENSXMAG00000030063	aff3	98	62.266	ENSAPEG00000006641	aff3	100	65.441	Amphiprion_percula
ENSXMAG00000030063	aff3	100	65.241	ENSATEG00000008905	aff3	100	63.336	Anabas_testudineus
ENSXMAG00000030063	aff3	67	59.325	ENSAMXG00000005439	aff3	99	60.825	Astyanax_mexicanus
ENSXMAG00000030063	aff3	98	72.625	ENSCVAG00000019194	aff3	99	74.846	Cyprinodon_variegatus
ENSXMAG00000030063	aff3	85	87.229	ENSGAFG00000021231	aff3	99	89.206	Gambusia_affinis
ENSXMAG00000030063	aff3	56	48.431	ENSIPUG00000004129	aff3	59	47.561	Ictalurus_punctatus
ENSXMAG00000030063	aff3	99	65.520	ENSKMAG00000001570	aff3	100	66.696	Kryptolebias_marmoratus
ENSXMAG00000030063	aff3	98	63.424	ENSMAMG00000016840	aff3	99	63.652	Mastacembelus_armatus
ENSXMAG00000030063	aff3	100	58.180	ENSORLG00000022089	aff3	100	58.819	Oryzias_latipes
ENSXMAG00000030063	aff3	100	58.207	ENSORLG00020011289	aff3	100	58.767	Oryzias_latipes_hni
ENSXMAG00000030063	aff3	98	57.170	ENSORLG00015014530	aff3	99	57.194	Oryzias_latipes_hsok
ENSXMAG00000030063	aff3	100	58.486	ENSOMEG00000011755	aff3	100	58.725	Oryzias_melastigma
ENSXMAG00000030063	aff3	50	40.372	ENSPCIG00000013816	AFF3	54	45.219	Phascolarctos_cinereus
ENSXMAG00000030063	aff3	98	87.830	ENSPFOG00000015830	aff3	100	89.261	Poecilia_formosa
ENSXMAG00000030063	aff3	98	89.434	ENSPREG00000008458	aff3	100	91.559	Poecilia_reticulata
ENSXMAG00000030063	aff3	100	65.100	ENSSMAG00000019954	aff3	100	64.753	Scophthalmus_maximus
ENSXMAG00000030063	aff3	99	63.536	ENSSLDG00000005399	aff3	100	65.674	Seriola_lalandi_dorsalis
ENSXMAG00000030063	aff3	99	66.533	ENSSPAG00000020071	aff3	100	67.014	Stegastes_partitus