Description
Ensembl ID
FBgn0000114 (Gene tree)
Gene ID
34648
Gene Symbol
bru1
Alias
-
Full Name
bruno 1
Gene Type
protein_coding
Species
Drosophila_melanogaster
Status
confidence
Strand
Plus strand
Length
138435 bases
Position
chr2L:12175004-12313438
Accession
FBgn0000114
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein ID
Domain
Pfam ID
E-value
Domain number
Total number
FBpp0304036RRM_1PF00076.222.4e-5313
FBpp0304036RRM_1PF00076.222.4e-5323
FBpp0304036RRM_1PF00076.222.4e-5333
FBpp0304037RRM_1PF00076.222.4e-5313
FBpp0304037RRM_1PF00076.222.4e-5323
FBpp0304037RRM_1PF00076.222.4e-5333
FBpp0304038RRM_1PF00076.222.4e-5313
FBpp0304038RRM_1PF00076.222.4e-5323
FBpp0304038RRM_1PF00076.222.4e-5333
FBpp0304320RRM_1PF00076.222.4e-5313
FBpp0304320RRM_1PF00076.222.4e-5323
FBpp0304320RRM_1PF00076.222.4e-5333
FBpp0079927RRM_1PF00076.222.9e-5313
FBpp0079927RRM_1PF00076.222.9e-5323
FBpp0079927RRM_1PF00076.222.9e-5333
FBpp0289794RRM_1PF00076.222.9e-5313
FBpp0289794RRM_1PF00076.222.9e-5323
FBpp0289794RRM_1PF00076.222.9e-5333
FBpp0304034RRM_1PF00076.223.2e-5313
FBpp0304034RRM_1PF00076.223.2e-5323
FBpp0304034RRM_1PF00076.223.2e-5333
FBpp0079926RRM_1PF00076.229.1e-5313
FBpp0079926RRM_1PF00076.229.1e-5323
FBpp0079926RRM_1PF00076.229.1e-5333
FBpp0304035RRM_1PF00076.229.1e-5313
FBpp0304035RRM_1PF00076.229.1e-5323
FBpp0304035RRM_1PF00076.229.1e-5333
FBpp0079929RRM_1PF00076.222.6e-3212
FBpp0079929RRM_1PF00076.222.6e-3222
RNA binding proteome (RBPome)
PID
Title
Method
Time
Author
Doi
27378189Global changes of the RNA bound proteome during the maternal-to-zygotic transition in DrosophilaIC & embryos.MZT2016 Jul 5Sysoev VODOI: 10.1038/ncomms12128
Transcripts
Transcript ID
Name
Length
RefSeq ID
Protein ID
Length
RefSeq ID
UniportKB ID
FBtr0300567-2302-FBpp0289794604 (aa)-Q960Z4
FBtr0331648-2431-FBpp0304038573 (aa)-M9PDB0
FBtr0331646-3381-FBpp0304036573 (aa)-M9PDB0
FBtr0331647-3019-FBpp0304037573 (aa)-M9PDB0
FBtr0331644-3342-FBpp0304034620 (aa)-Q8IP89
FBtr0331645-4147-FBpp0304035810 (aa)-C8VV87
FBtr0080347-2385-FBpp0079929361 (aa)-G7H844
FBtr0331998-3510-FBpp0304320573 (aa)-M9PDB0
FBtr0080345-2651-FBpp0079927604 (aa)-O02374
FBtr0080344-3436-FBpp0079926810 (aa)-Q8IP90
Protein-Protein Interaction (PPI)
Paralogs
Ensembl ID
Gene Symbol
Coverage
Identiy
Paralog
Gene Symbol
Coverage
Identiy
FBgn0000114bru110052.406FBgn0262475bru210051.852
Orthologs
Ensembl ID
Gene Symbol
Coverage
Identiy
Ortholog
Gene Symbol
Coverage
Identiy
Species
FBgn0000114bru110040.506ENSCING00000003762-9745.565Ciona_intestinalis
FBgn0000114bru110040.691ENSCSAVG00000007662-9944.286Ciona_savignyi
Gene Ontology
Go ID
Go_term
PubmedID
Evidence
Category
GO:0000381regulation of alternative mRNA splicing, via spliceosome15492211.HMPProcess
GO:0000381regulation of alternative mRNA splicing, via spliceosome21873635.IBAProcess
GO:0000381regulation of alternative mRNA splicing, via spliceosome25246617.25532219.IMPProcess
GO:0003723RNA binding21873635.IBAFunction
GO:0003723RNA binding16469699.IDAFunction
GO:0003729mRNA binding21873635.IBAFunction
GO:0003729mRNA binding10908586.ISSFunction
GO:0003729mRNA binding12414187.NASFunction
GO:0003729mRNA binding10449356.TASFunction
GO:0003730mRNA 3'-UTR binding12591598.19393317.IDAFunction
GO:0003730mRNA 3'-UTR binding12414187.TASFunction
GO:0005515protein binding10021333.12538512.IPIFunction
GO:0005634nucleus21873635.IBAComponent
GO:0005634nucleus15492211.ICComponent
GO:0005634nucleus25246617.25532219.IDAComponent
GO:0005634nucleus18388491.IGIComponent
GO:0005737cytoplasm21873635.IBAComponent
GO:0005737cytoplasm18388491.25532219.IDAComponent
GO:0006376mRNA splice site selection21873635.IBAProcess
GO:0007281germ cell development16399084.IMPProcess
GO:0007319negative regulation of oskar mRNA translation16469699.IDAProcess
GO:0007319negative regulation of oskar mRNA translation12414187.12655640.NASProcess
GO:0007319negative regulation of oskar mRNA translation9642168.11700288.TASProcess
GO:0014881regulation of myofibril size25532219.IMPProcess
GO:0016604nuclear body25246617.IDAComponent
GO:0017148negative regulation of translation12591598.19393317.IMPProcess
GO:0031536positive regulation of exit from mitosis16399084.IMPProcess
GO:0031965nuclear membrane25532219.IDAComponent
GO:0036099female germ-line stem cell population maintenance24120347.IGIProcess
GO:0043186P granule15090597.IDAComponent
GO:0045214sarcomere organization25532219.IMPProcess
GO:0048477oogenesis1783295.HMPProcess
GO:0048477oogenesis11309853.12591598.IMPProcess
GO:1990904ribonucleoprotein complex21873635.IBAComponent
GO:2000738positive regulation of stem cell differentiation24120347.IMPProcess