EuRBPDB

Description

RBPome

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0000239 (Gene tree)
Gene ID: 45830
Gene Symbol: bur
Alias: -
Full Name: burgundy
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Minus strand
Length: 5502
Position: chr2L: 21174182-21179683
Accession: FBgn0000239
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27197210	The mRNA-bound proteome of the early fly embryo	IC & embryos	2016 Apr 28	Wessels HH	DOI: 10.1101/gr.200386.115

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0343875	-	3116	-	FBpp0310411	683 (aa)	-	C4IXY5
FBtr0301342	-	2915	-	FBpp0290556	683 (aa)	-	Q9VIE7

Gene Model

Click here to download FBgn0000239's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0000239's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0000239	bur	94	38.889	YMR217W		98	38.889	Saccharomyces_cerevisiae

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003921	GMP synthase activity	21873635.	IBA	Function
GO:0003922	GMP synthase (glutamine-hydrolyzing) activity	21873635.	IBA	Function
GO:0005524	ATP binding	-	IEA	Function
GO:0005700	polytene chromosome	19995917.	IDA	Component
GO:0005829	cytosol	21873635.	IBA	Component
GO:0006177	GMP biosynthetic process	21873635.	IBA	Process
GO:0007411	axon guidance	16322525.	IMP	Process
GO:0016462	pyrophosphatase activity	-	IEA	Function
GO:0016578	histone deubiquitination	15749019.	IDA	Process
GO:0032991	protein-containing complex	15749019.	IPI	Component
GO:0035800	deubiquitinase activator activity	15749019.	IDA	Function
GO:0045880	positive regulation of smoothened signaling pathway	26120032.	IMP	Process
GO:2000152	regulation of ubiquitin-specific protease activity	15749019.	IDA	Process