EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0000377 (Gene tree)
Gene ID: 31208
Gene Symbol: crn
Alias: -
Full Name: crooked neck
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Minus strand
Length: 2390 bases
Position: chrX:2247594-2249983
Accession: FBgn0000377
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0070402	Suf	PF05843.14	1.5e-13	1	1
FBpp0070402	HAT	PF02184.16	6.5e-37	1	2
FBpp0070402	HAT	PF02184.16	6.5e-37	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0070418	-	2332	-	FBpp0070402	702 (aa)	-	P17886

Gene Model

Click here to download FBgn0000377's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0000377's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0000377	crn	96	69.300	ENSG00000101343	CRNKL1	97	69.300	Homo_sapiens
FBgn0000377	crn	98	68.110	ENSAPOG00000009705	crnkl1	95	68.619	Acanthochromis_polyacanthus
FBgn0000377	crn	95	69.670	ENSAMEG00000000270	CRNKL1	80	69.670	Ailuropoda_melanoleuca
FBgn0000377	crn	99	67.965	ENSACIG00000015267	crnkl1	88	69.611	Amphilophus_citrinellus
FBgn0000377	crn	98	67.914	ENSAOCG00000021964	crnkl1	87	69.670	Amphiprion_ocellaris
FBgn0000377	crn	99	66.949	ENSAPEG00000015041	crnkl1	88	69.520	Amphiprion_percula
FBgn0000377	crn	99	65.957	ENSATEG00000001068	crnkl1	88	67.456	Anabas_testudineus
FBgn0000377	crn	94	68.024	ENSAPLG00000013105	CRNKL1	95	68.024	Anas_platyrhynchos
FBgn0000377	crn	97	68.275	ENSACAG00000005284	CRNKL1	98	68.889	Anolis_carolinensis
FBgn0000377	crn	90	69.683	ENSANAG00000024889	CRNKL1	99	69.683	Aotus_nancymaae
FBgn0000377	crn	99	67.139	ENSACLG00000010813	crnkl1	90	68.521	Astatotilapia_calliptera
FBgn0000377	crn	94	69.683	ENSAMXG00000018334	crnkl1	89	69.520	Astyanax_mexicanus
FBgn0000377	crn	98	67.971	ENSBTAG00000008472	CRNKL1	95	69.670	Bos_taurus
FBgn0000377	crn	92	62.154	WBGene00019762	M03F8.3	89	61.630	Caenorhabditis_elegans
FBgn0000377	crn	97	68.567	ENSCJAG00000005393	CRNKL1	97	69.083	Callithrix_jacchus
FBgn0000377	crn	95	69.520	ENSCAFG00000005333	CRNKL1	92	68.935	Canis_familiaris
FBgn0000377	crn	95	69.520	ENSCAFG00020027488	CRNKL1	97	68.935	Canis_lupus_dingo
FBgn0000377	crn	98	67.101	ENSCHIG00000013171	CRNKL1	97	67.794	Capra_hircus
FBgn0000377	crn	96	68.343	ENSTSYG00000004197	CRNKL1	97	68.343	Carlito_syrichta
FBgn0000377	crn	96	65.777	ENSCAPG00000010501	CRNKL1	96	68.204	Cavia_aperea
FBgn0000377	crn	97	68.421	ENSCPOG00000004418	CRNKL1	96	69.520	Cavia_porcellus
FBgn0000377	crn	96	69.151	ENSCCAG00000027037	CRNKL1	97	69.151	Cebus_capucinus
FBgn0000377	crn	96	69.300	ENSCATG00000034247	CRNKL1	97	69.300	Cercocebus_atys
FBgn0000377	crn	96	69.083	ENSCLAG00000013859	CRNKL1	97	69.083	Chinchilla_lanigera
FBgn0000377	crn	96	69.300	ENSCSAG00000011434	CRNKL1	97	69.300	Chlorocebus_sabaeus
FBgn0000377	crn	95	69.369	ENSCHOG00000006371	CRNKL1	80	69.369	Choloepus_hoffmanni
FBgn0000377	crn	95	69.219	ENSCPBG00000023501	CRNKL1	96	69.219	Chrysemys_picta_bellii
FBgn0000377	crn	96	65.127	ENSCING00000002709	-	97	65.030	Ciona_intestinalis
FBgn0000377	crn	96	69.300	ENSCANG00000038789	CRNKL1	97	69.300	Colobus_angolensis_palliatus
FBgn0000377	crn	95	69.369	ENSCGRG00001000687	-	97	68.787	Cricetulus_griseus_chok1gshd
FBgn0000377	crn	95	69.369	ENSCGRG00001001115	-	97	68.787	Cricetulus_griseus_chok1gshd
FBgn0000377	crn	95	69.369	ENSCGRG00000007854	Crnkl1	97	68.787	Cricetulus_griseus_crigri
FBgn0000377	crn	96	68.703	ENSCSEG00000005594	crnkl1	86	67.930	Cynoglossus_semilaevis
FBgn0000377	crn	95	69.520	ENSCVAG00000015172	crnkl1	89	69.520	Cyprinodon_variegatus
FBgn0000377	crn	94	69.033	ENSDARG00000007901	crnkl1	88	68.452	Danio_rerio
FBgn0000377	crn	95	69.520	ENSDNOG00000016226	CRNKL1	91	69.520	Dasypus_novemcinctus
FBgn0000377	crn	95	65.916	ENSDORG00000030174	-	97	65.916	Dipodomys_ordii
FBgn0000377	crn	95	65.616	ENSDORG00000023724	-	97	65.616	Dipodomys_ordii
FBgn0000377	crn	95	67.708	ENSDORG00000000394	-	97	67.155	Dipodomys_ordii
FBgn0000377	crn	95	59.760	ENSETEG00000003711	CRNKL1	80	59.760	Echinops_telfairi
FBgn0000377	crn	98	48.828	ENSEBUG00000013461	crnkl1	94	47.788	Eptatretus_burgeri
FBgn0000377	crn	95	69.670	ENSEASG00005002072	CRNKL1	97	69.083	Equus_asinus_asinus
FBgn0000377	crn	95	69.670	ENSECAG00000022215	CRNKL1	97	69.083	Equus_caballus
FBgn0000377	crn	95	67.568	ENSEEUG00000000413	CRNKL1	90	67.012	Erinaceus_europaeus
FBgn0000377	crn	95	68.018	ENSELUG00000015424	crnkl1	93	68.018	Esox_lucius
FBgn0000377	crn	95	69.670	ENSFCAG00000000714	CRNKL1	97	69.083	Felis_catus
FBgn0000377	crn	94	67.722	ENSFALG00000004611	CRNKL1	98	67.722	Ficedula_albicollis
FBgn0000377	crn	95	69.670	ENSFDAG00000000604	CRNKL1	96	69.670	Fukomys_damarensis
FBgn0000377	crn	96	68.843	ENSFHEG00000013163	crnkl1	88	68.576	Fundulus_heteroclitus
FBgn0000377	crn	95	68.066	ENSGMOG00000007609	crnkl1	92	67.905	Gadus_morhua
FBgn0000377	crn	95	68.769	ENSGALG00000008429	CRNKL1	96	68.769	Gallus_gallus
FBgn0000377	crn	95	69.670	ENSGAFG00000014249	crnkl1	87	69.670	Gambusia_affinis
FBgn0000377	crn	99	65.665	ENSGACG00000011852	crnkl1	88	68.216	Gasterosteus_aculeatus
FBgn0000377	crn	92	67.391	ENSGAGG00000021233	CRNKL1	97	67.391	Gopherus_agassizii
FBgn0000377	crn	96	69.300	ENSGGOG00000014176	CRNKL1	97	69.300	Gorilla_gorilla
FBgn0000377	crn	99	67.139	ENSHBUG00000005246	crnkl1	89	68.521	Haplochromis_burtoni
FBgn0000377	crn	95	69.670	ENSHGLG00000010856	CRNKL1	97	69.083	Heterocephalus_glaber_female
FBgn0000377	crn	95	69.670	ENSHGLG00100011521	CRNKL1	97	69.083	Heterocephalus_glaber_male
FBgn0000377	crn	95	67.713	ENSHCOG00000006420	crnkl1	96	67.708	Hippocampus_comes
FBgn0000377	crn	90	53.943	ENSIPUG00000000315	-	98	53.943	Ictalurus_punctatus
FBgn0000377	crn	93	68.397	ENSIPUG00000006751	crnkl1	91	67.620	Ictalurus_punctatus
FBgn0000377	crn	94	58.610	ENSIPUG00000006836	-	97	58.185	Ictalurus_punctatus
FBgn0000377	crn	97	68.275	ENSSTOG00000014747	CRNKL1	97	68.787	Ictidomys_tridecemlineatus
FBgn0000377	crn	96	67.052	ENSJJAG00000016926	Crnkl1	97	67.052	Jaculus_jaculus
FBgn0000377	crn	99	67.719	ENSKMAG00000003620	crnkl1	86	68.676	Kryptolebias_marmoratus
FBgn0000377	crn	98	56.585	ENSLBEG00000003543	crnkl1	88	57.808	Labrus_bergylta
FBgn0000377	crn	98	66.763	ENSLACG00000001129	CRNKL1	97	67.857	Latimeria_chalumnae
FBgn0000377	crn	94	69.231	ENSLOCG00000016889	crnkl1	92	69.069	Lepisosteus_oculatus
FBgn0000377	crn	95	68.405	ENSLAFG00000004512	CRNKL1	97	69.129	Loxodonta_africana
FBgn0000377	crn	96	69.300	ENSMFAG00000039893	CRNKL1	97	69.300	Macaca_fascicularis
FBgn0000377	crn	96	69.300	ENSMMUG00000007709	CRNKL1	97	69.300	Macaca_mulatta
FBgn0000377	crn	96	69.300	ENSMNEG00000037490	CRNKL1	97	69.300	Macaca_nemestrina
FBgn0000377	crn	96	69.300	ENSMLEG00000034885	CRNKL1	97	69.300	Mandrillus_leucophaeus
FBgn0000377	crn	99	66.809	ENSMAMG00000008757	crnkl1	89	68.429	Mastacembelus_armatus
FBgn0000377	crn	99	67.139	ENSMZEG00005022345	crnkl1	90	68.521	Maylandia_zebra
FBgn0000377	crn	95	67.910	ENSMGAG00000003452	CRNKL1	91	67.910	Meleagris_gallopavo
FBgn0000377	crn	95	69.369	ENSMAUG00000020764	Crnkl1	96	69.369	Mesocricetus_auratus
FBgn0000377	crn	96	68.935	ENSMICG00000006048	CRNKL1	97	68.935	Microcebus_murinus
FBgn0000377	crn	89	64.660	ENSMOCG00000000681	-	97	64.134	Microtus_ochrogaster
FBgn0000377	crn	94	49.548	ENSMOCG00000004179	-	94	48.879	Microtus_ochrogaster
FBgn0000377	crn	90	68.038	ENSMMOG00000017601	crnkl1	96	68.038	Mola_mola
FBgn0000377	crn	97	64.986	ENSMODG00000005961	-	97	64.723	Monodelphis_domestica
FBgn0000377	crn	96	65.735	ENSMODG00000010857	-	98	65.735	Monodelphis_domestica
FBgn0000377	crn	99	49.027	ENSMALG00000011211	crnkl1	86	50.000	Monopterus_albus
FBgn0000377	crn	99	67.050	MGP_CAROLIEiJ_G0024394	Crnkl1	96	69.219	Mus_caroli
FBgn0000377	crn	95	69.219	ENSMUSG00000001767	Crnkl1	96	69.219	Mus_musculus
FBgn0000377	crn	95	69.219	MGP_PahariEiJ_G0025838	Crnkl1	96	69.219	Mus_pahari
FBgn0000377	crn	95	69.219	MGP_SPRETEiJ_G0025312	Crnkl1	96	69.219	Mus_spretus
FBgn0000377	crn	95	69.670	ENSMPUG00000001226	CRNKL1	97	69.083	Mustela_putorius_furo
FBgn0000377	crn	95	69.265	ENSMLUG00000016513	CRNKL1	85	69.265	Myotis_lucifugus
FBgn0000377	crn	97	66.284	ENSNGAG00000023097	Crnkl1	97	66.763	Nannospalax_galili
FBgn0000377	crn	99	67.139	ENSNBRG00000007867	crnkl1	89	68.668	Neolamprologus_brichardi
FBgn0000377	crn	96	66.021	ENSNLEG00000009862	CRNKL1	97	66.021	Nomascus_leucogenys
FBgn0000377	crn	96	64.993	ENSMEUG00000002361	-	97	64.993	Notamacropus_eugenii
FBgn0000377	crn	94	68.541	ENSMEUG00000012167	-	97	68.541	Notamacropus_eugenii
FBgn0000377	crn	75	47.538	ENSOPRG00000009242	-	62	47.538	Ochotona_princeps
FBgn0000377	crn	95	69.069	ENSODEG00000012175	CRNKL1	97	68.491	Octodon_degus
FBgn0000377	crn	99	66.997	ENSONIG00000018728	crnkl1	89	68.375	Oreochromis_niloticus
FBgn0000377	crn	93	68.817	ENSOCUG00000015484	CRNKL1	80	69.012	Oryctolagus_cuniculus
FBgn0000377	crn	99	66.187	ENSORLG00000017240	crnkl1	94	64.706	Oryzias_latipes
FBgn0000377	crn	98	66.811	ENSORLG00020001742	crnkl1	90	67.552	Oryzias_latipes_hni
FBgn0000377	crn	98	66.860	ENSORLG00015019564	crnkl1	89	68.053	Oryzias_latipes_hsok
FBgn0000377	crn	99	66.147	ENSOMEG00000019895	crnkl1	89	68.499	Oryzias_melastigma
FBgn0000377	crn	96	69.083	ENSOGAG00000011544	CRNKL1	97	69.083	Otolemur_garnettii
FBgn0000377	crn	98	68.261	ENSOARG00000002150	CRNKL1	88	68.971	Ovis_aries
FBgn0000377	crn	96	68.256	ENSPPAG00000027847	CRNKL1	80	68.256	Pan_paniscus
FBgn0000377	crn	95	69.670	ENSPPRG00000001955	CRNKL1	97	69.083	Panthera_pardus
FBgn0000377	crn	95	69.670	ENSPTIG00000007393	CRNKL1	97	69.083	Panthera_tigris_altaica
FBgn0000377	crn	96	69.300	ENSPTRG00000030609	CRNKL1	97	69.300	Pan_troglodytes
FBgn0000377	crn	96	69.300	ENSPANG00000017420	CRNKL1	97	69.300	Papio_anubis
FBgn0000377	crn	94	65.217	ENSPKIG00000017093	crnkl1	86	65.127	Paramormyrops_kingsleyae
FBgn0000377	crn	94	69.138	ENSPSIG00000012705	CRNKL1	95	69.138	Pelodiscus_sinensis
FBgn0000377	crn	99	64.317	ENSPMGG00000006263	crnkl1	95	65.639	Periophthalmus_magnuspinnatus
FBgn0000377	crn	95	69.520	ENSPEMG00000000073	-	97	68.935	Peromyscus_maniculatus_bairdii
FBgn0000377	crn	96	67.794	ENSPMAG00000002250	crnkl1	97	67.794	Petromyzon_marinus
FBgn0000377	crn	96	67.160	ENSPCIG00000025825	CRNKL1	93	67.160	Phascolarctos_cinereus
FBgn0000377	crn	95	69.520	ENSPFOG00000005102	crnkl1	89	69.520	Poecilia_formosa
FBgn0000377	crn	95	69.520	ENSPLAG00000007288	crnkl1	86	69.520	Poecilia_latipinna
FBgn0000377	crn	95	69.670	ENSPMEG00000008865	crnkl1	90	69.670	Poecilia_mexicana
FBgn0000377	crn	94	69.532	ENSPREG00000012615	crnkl1	88	69.532	Poecilia_reticulata
FBgn0000377	crn	96	69.151	ENSPPYG00000010747	CRNKL1	78	69.151	Pongo_abelii
FBgn0000377	crn	95	65.616	ENSPCAG00000003296	CRNKL1	82	65.616	Procavia_capensis
FBgn0000377	crn	96	67.751	ENSPCOG00000017608	CRNKL1	81	67.751	Propithecus_coquereli
FBgn0000377	crn	95	69.670	ENSPVAG00000006207	CRNKL1	80	69.670	Pteropus_vampyrus
FBgn0000377	crn	99	66.997	ENSPNYG00000001977	crnkl1	90	68.375	Pundamilia_nyererei
FBgn0000377	crn	99	67.811	ENSPNAG00000001507	crnkl1	95	67.115	Pygocentrus_nattereri
FBgn0000377	crn	95	69.219	ENSRNOG00000010587	Crnkl1	96	69.219	Rattus_norvegicus
FBgn0000377	crn	95	68.769	ENSRNOG00000040045	Crnkl1	96	68.769	Rattus_norvegicus
FBgn0000377	crn	96	69.300	ENSRBIG00000031770	CRNKL1	97	69.300	Rhinopithecus_bieti
FBgn0000377	crn	96	69.151	ENSRROG00000040450	CRNKL1	97	69.151	Rhinopithecus_roxellana
FBgn0000377	crn	93	37.155	YLR117C	CLF1	99	37.246	Saccharomyces_cerevisiae
FBgn0000377	crn	96	69.300	ENSSBOG00000029672	CRNKL1	97	69.300	Saimiri_boliviensis_boliviensis
FBgn0000377	crn	94	59.036	ENSSHAG00000011199	CRNKL1	99	59.036	Sarcophilus_harrisii
FBgn0000377	crn	94	68.580	ENSSFOG00015000946	crnkl1	86	68.366	Scleropages_formosus
FBgn0000377	crn	98	68.023	ENSSMAG00000007933	crnkl1	86	69.254	Scophthalmus_maximus
FBgn0000377	crn	99	61.615	ENSSDUG00000012625	crnkl1	86	63.166	Seriola_dumerili
FBgn0000377	crn	99	67.234	ENSSLDG00000021413	crnkl1	87	69.037	Seriola_lalandi_dorsalis
FBgn0000377	crn	95	69.069	ENSSARG00000006443	CRNKL1	79	69.069	Sorex_araneus
FBgn0000377	crn	98	67.006	ENSSPUG00000005254	CRNKL1	97	67.751	Sphenodon_punctatus
FBgn0000377	crn	98	67.919	ENSSPAG00000016150	crnkl1	86	68.991	Stegastes_partitus
FBgn0000377	crn	98	68.017	ENSSSCG00000038587	CRNKL1	95	69.670	Sus_scrofa
FBgn0000377	crn	95	68.955	ENSTGUG00000007645	CRNKL1	95	68.955	Taeniopygia_guttata
FBgn0000377	crn	95	64.715	ENSTRUG00000015417	crnkl1	89	64.254	Takifugu_rubripes
FBgn0000377	crn	95	68.816	ENSTNIG00000010710	crnkl1	96	68.296	Tetraodon_nigroviridis
FBgn0000377	crn	90	68.254	ENSTBEG00000001304	CRNKL1	81	68.254	Tupaia_belangeri
FBgn0000377	crn	90	66.508	ENSTTRG00000000484	CRNKL1	80	66.508	Tursiops_truncatus
FBgn0000377	crn	95	69.670	ENSUAMG00000018586	CRNKL1	97	69.083	Ursus_americanus
FBgn0000377	crn	95	69.670	ENSUMAG00000024957	CRNKL1	97	69.083	Ursus_maritimus
FBgn0000377	crn	95	69.520	ENSVVUG00000012559	CRNKL1	79	69.520	Vulpes_vulpes
FBgn0000377	crn	96	67.751	ENSXETG00000009698	crnkl1	97	67.751	Xenopus_tropicalis
FBgn0000377	crn	95	68.366	ENSXCOG00000000824	crnkl1	88	68.366	Xiphophorus_couchianus
FBgn0000377	crn	95	69.369	ENSXMAG00000006896	crnkl1	88	69.369	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000245	spliceosomal complex assembly	21873635.	IBA	Process
GO:0000381	regulation of alternative mRNA splicing, via spliceosome	15492211.	HMP	Process
GO:0000381	regulation of alternative mRNA splicing, via spliceosome	17166919.19218244.	IMP	Process
GO:0000398	mRNA splicing, via spliceosome	21873635.	IBA	Process
GO:0000398	mRNA splicing, via spliceosome	18981222.	IC	Process
GO:0000974	Prp19 complex	21873635.	IBA	Component
GO:0003723	RNA binding	-	ISS	Function
GO:0005634	nucleus	15492211.	IC	Component
GO:0005634	nucleus	24603360.	IDA	Component
GO:0005737	cytoplasm	24603360.	IDA	Component
GO:0007438	oenocyte development	17178401.	IMP	Process
GO:0007443	Malpighian tubule morphogenesis	10502111.	IMP	Process
GO:0008347	glial cell migration	17178401.	IMP	Process
GO:0008366	axon ensheathment	17178401.	IMP	Process
GO:0016607	nuclear speck	12163015.	IDA	Component
GO:0071007	U2-type catalytic step 2 spliceosome	21873635.	IBA	Component
GO:0071011	precatalytic spliceosome	18981222.	HDA	Component
GO:0071013	catalytic step 2 spliceosome	18981222.	HDA	Component
GO:0071013	catalytic step 2 spliceosome	21873635.	IBA	Component
GO:0071014	post-mRNA release spliceosomal complex	21873635.	IBA	Component