EuRBPDB

Description

RBDs

RBPome

Transcripts

Gene Model

PPI

Gene Ontology

Description

Ensembl ID: FBgn0000392 (Gene tree)
Gene ID: 33934
Gene Symbol: cup
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: confidence
Strand: Plus strand
Length: 11117 bases
Position: chr2L:6663664-6674780
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0288761	EIF4E-T	PF10477.9	1e-17	1	1
FBpp0312102	EIF4E-T	PF10477.9	1e-17	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27378189	Global changes of the RNA bound proteome during the maternal-to-zygotic transition in Drosophila	IC & embryos.MZT	2016 Jul 5	Sysoev VO	DOI: 10.1038/ncomms12128
27197210	The mRNA-bound proteome of the early fly embryo	IC & embryos	2016 Apr 28	Wessels HH	DOI: 10.1101/gr.200386.115

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0290322	-	4002	-	FBpp0288761	1117 (aa)	-	Q9VMA3
FBtr0346452	-	4306	-	FBpp0312102	1117 (aa)	-	Q9VMA3

Gene Model

Click here to download FBgn0000392's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0000392's network

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000932	P-body	16256742.20452345.	IDA	Component
GO:0000932	P-body	24335285.	IDA	Component
GO:0003723	RNA binding	16469699.	IDA	Function
GO:0005515	protein binding	16256742.17277377.	IPI	Function
GO:0005634	nucleus	24335285.	IDA	Component
GO:0005737	cytoplasm	19101615.24335285.	IDA	Component
GO:0005829	cytosol	25294944.	HDA	Component
GO:0007143	female meiotic nuclear division	11060247.	IGI	Process
GO:0007297	ovarian follicle cell migration	1783295.	HMP	Process
GO:0007317	regulation of pole plasm oskar mRNA localization	14691130.14691132.	IMP	Process
GO:0007319	negative regulation of oskar mRNA translation	16469699.	IDA	Process
GO:0007319	negative regulation of oskar mRNA translation	14691132.	IMP	Process
GO:0008298	intracellular mRNA localization	18082158.	IMP	Process
GO:0008582	regulation of synaptic growth at neuromuscular junction	26102195.	IMP	Process
GO:0009953	dorsal/ventral pattern formation	18082158.	IMP	Process
GO:0017148	negative regulation of translation	18082158.	IMP	Process
GO:0017148	negative regulation of translation	14685270.	IPI	Process
GO:0030715	oocyte growth in germarium-derived egg chamber	17277377.	IGI	Process
GO:0031594	neuromuscular junction	26102195.	IDA	Component
GO:0043195	terminal bouton	26102195.	IDA	Component
GO:0045132	meiotic chromosome segregation	9118812.	IDA	Process
GO:0045182	translation regulator activity	14723848.	IDA	Function
GO:0048477	oogenesis	1783295.	HMP	Process
GO:0048477	oogenesis	18082158.	IMP	Process
GO:0070971	endoplasmic reticulum exit site	16256742.	IDA	Component
GO:0071598	neuronal ribonucleoprotein granule	17178403.	IDA	Component
GO:1990124	messenger ribonucleoprotein complex	16256742.17178403.	IDA	Component