EuRBPDB

Description

RBPome

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0001124 (Gene tree)
Gene ID: 36782
Gene Symbol: Got1
Alias: -
Full Name: Glutamate oxaloacetate transaminase 1
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Plus strand
Length: 3577
Position: chr2R: 16138352-16141928
Accession: FBgn0001124
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27378189	Global changes of the RNA bound proteome during the maternal-to-zygotic transition in Drosophila	IC & embryos.MZT	2016 Jul 5	Sysoev VO	DOI: 10.1038/ncomms12128

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0087232	-	1683	-	FBpp0086371	416 (aa)	-	Q7K221
FBtr0087231	-	1682	-	FBpp0086370	437 (aa)	-	A1ZAA5

Gene Model

Click here to download FBgn0001124's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0001124's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0001124	Got1	96	59.601	WBGene00020146	got-1.2	98	59.601	Caenorhabditis_elegans
FBgn0001124	Got1	95	46.851	FBgn0001125	Got2	93	46.851	Drosophila_melanogaster
FBgn0001124	Got1	96	56.404	ENSG00000120053	GOT1	98	56.404	Homo_sapiens
FBgn0001124	Got1	95	48.866	ENSG00000125166	GOT2	95	48.058	Homo_sapiens
FBgn0001124	Got1	95	48.615	ENSMUSG00000031672	Got2	95	47.816	Mus_musculus
FBgn0001124	Got1	96	48.157	YLR027C	AAT2	98	47.922	Saccharomyces_cerevisiae

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0004069	L-aspartate:2-oxoglutarate aminotransferase activity	21873635.	IBA	Function
GO:0004069	L-aspartate:2-oxoglutarate aminotransferase activity	823072.3106567.	IDA	Function
GO:0004069	L-aspartate:2-oxoglutarate aminotransferase activity	-	ISS	Function
GO:0005759	mitochondrial matrix	-	ISS	Component
GO:0005777	peroxisome	22758915.	ISM	Component
GO:0005829	cytosol	25294944.	HDA	Component
GO:0005829	cytosol	21873635.	IBA	Component
GO:0006531	aspartate metabolic process	-	ISS	Process
GO:0006532	aspartate biosynthetic process	21873635.	IBA	Process
GO:0006537	glutamate biosynthetic process	3106567.	IDA	Process
GO:0030170	pyridoxal phosphate binding	-	IEA	Function