EuRBPDB

Description

RBPome

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0001197 (Gene tree)
Gene ID: 43229
Gene Symbol: His2Av
Alias: -
Full Name: Histone H2A variant
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Plus strand
Length: 2292
Position: chr3R: 26866929-26869220
Accession: FBgn0001197
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27378189	Global changes of the RNA bound proteome during the maternal-to-zygotic transition in Drosophila	IC & embryos.MZT	2016 Jul 5	Sysoev VO	DOI: 10.1038/ncomms12128

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0334311	-	1169	-	FBpp0306426	141 (aa)	-	P08985
FBtr0085062	-	912	-	FBpp0084434	141 (aa)	-	P08985

Gene Model

Click here to download FBgn0001197's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0001197's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0001197	His2Av	87	98.361	ENSG00000105968	H2AFV	100	96.970	Homo_sapiens

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000786	nucleosome	18408708.	IDA	Component
GO:0000790	nuclear chromatin	21873635.	IBA	Component
GO:0003677	DNA binding	21873635.	IBA	Function
GO:0005634	nucleus	10801889.	IDA	Component
GO:0005694	chromosome	10801889.	IDA	Component
GO:0005700	polytene chromosome	10801889.19685068.	IDA	Component
GO:0005701	polytene chromosome chromocenter	18704724.	IDA	Component
GO:0006325	chromatin organization	21873635.	IBA	Process
GO:0035019	somatic stem cell population maintenance	24244183.	IMP	Process
GO:0035861	site of double-strand break	26452093.	IDA	Component
GO:0036098	male germ-line stem cell population maintenance	24244183.	IMP	Process
GO:0044877	protein-containing complex binding	15528408.	IDA	Function
GO:0046982	protein heterodimerization activity	-	IEA	Function
GO:0071168	protein localization to chromatin	21444826.	IDA	Process