EuRBPDB

Description

RBPome

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0001248 (Gene tree)
Gene ID: 44291
Gene Symbol: Idh
Alias: -
Full Name: Isocitrate dehydrogenase
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Minus strand
Length: 4503
Position: chr3L: 8356404-8360906
Accession: FBgn0001248
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27197210	The mRNA-bound proteome of the early fly embryo	IC & embryos	2016 Apr 28	Wessels HH	DOI: 10.1101/gr.200386.115

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0076673	-	1809	-	FBpp0076396	450 (aa)	-	Q9VSI6
FBtr0076671	-	1642	-	FBpp0076394	437 (aa)	-	Q8IQA7
FBtr0076670	-	1944	-	FBpp0076393	469 (aa)	-	C8VV61
FBtr0076667	-	1616	-	FBpp0076390	416 (aa)	-	Q7KUB0
FBtr0076668	-	1646	-	FBpp0076391	416 (aa)	-	Q7KUB0
FBtr0076669	-	2026	-	FBpp0076392	450 (aa)	-	Q9VSI6
FBtr0114548	-	1776	-	FBpp0113040	450 (aa)	-	Q9VSI6
FBtr0114549	-	1899	-	FBpp0113041	450 (aa)	-	Q9VSI6
FBtr0333058	-	1974	-	FBpp0305272	479 (aa)	-	B7Z0E0

Gene Model

Click here to download FBgn0001248's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0001248's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0001248	Idh	99	72.573	ENSMUSG00000025950	Idh1	100	77.622	Mus_musculus
FBgn0001248	Idh	97	65.594	ENSMUSG00000030541	Idh2	100	64.000	Mus_musculus
FBgn0001248	Idh	95	63.840	YDL066W		98	62.118	Saccharomyces_cerevisiae
FBgn0001248	Idh	96	60.050	YNL009W		95	60.050	Saccharomyces_cerevisiae

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000287	magnesium ion binding	-	IEA	Function
GO:0004448	isocitrate dehydrogenase activity	28827794.	IMP	Function
GO:0004450	isocitrate dehydrogenase (NADP+) activity	21873635.	IBA	Function
GO:0004450	isocitrate dehydrogenase (NADP+) activity	-	IDA	Function
GO:0005737	cytoplasm	28827794.	IDA	Component
GO:0005739	mitochondrion	16212416.	HDA	Component
GO:0005739	mitochondrion	28827794.	IDA	Component
GO:0005777	peroxisome	21873635.	IBA	Component
GO:0005777	peroxisome	22758915.	ISS	Component
GO:0005829	cytosol	21873635.	IBA	Component
GO:0006102	isocitrate metabolic process	21873635.	IBA	Process
GO:0006102	isocitrate metabolic process	-	IDA	Process
GO:0006739	NADP metabolic process	21873635.	IBA	Process
GO:0034599	cellular response to oxidative stress	28827794.	IMP	Process
GO:0042803	protein homodimerization activity	21873635.	IBA	Function
GO:0051287	NAD binding	-	IEA	Function
GO:0055114	oxidation-reduction process	28827794.	IMP	Process