EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0001565 (Gene tree)
Gene ID: 33118
Gene Symbol: Hlc
Alias: -
Full Name: Helicase
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Minus strand
Length: 2429 bases
Position: chrX:21385518-21387946
Accession: FBgn0001565
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0076917	ResIII	PF04851.15	1.9e-07	1	1
FBpp0310396	ResIII	PF04851.15	1.9e-07	1	1
FBpp0076917	DEAD	PF00270.29	3.2e-37	1	1
FBpp0310396	DEAD	PF00270.29	3.2e-37	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0343853	-	1963	-	FBpp0310396	560 (aa)	-	Q9VRI0
FBtr0077221	-	2116	-	FBpp0076917	560 (aa)	-	Q8MYS0

Gene Model

Click here to download FBgn0001565's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0001565's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
FBgn0001565	Hlc	67	40.625	FBgn0015075	Ddx1	54	40.625

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0001565	Hlc	89	49.605	ENSG00000136271	DDX56	99	50.806	Homo_sapiens
FBgn0001565	Hlc	98	49.911	ENSAPOG00000017113	ddx56	98	51.521	Acanthochromis_polyacanthus
FBgn0001565	Hlc	89	49.605	ENSAMEG00000017711	DDX56	98	47.091	Ailuropoda_melanoleuca
FBgn0001565	Hlc	90	45.825	ENSACIG00000013747	ddx56	99	52.717	Amphilophus_citrinellus
FBgn0001565	Hlc	88	51.485	ENSAOCG00000018059	ddx56	94	51.485	Amphiprion_ocellaris
FBgn0001565	Hlc	86	51.943	ENSAOCG00000015447	-	87	51.943	Amphiprion_ocellaris
FBgn0001565	Hlc	97	49.819	ENSAPEG00000007267	ddx56	98	49.819	Amphiprion_percula
FBgn0001565	Hlc	95	50.277	ENSATEG00000005279	ddx56	99	49.374	Anabas_testudineus
FBgn0001565	Hlc	98	49.283	ENSACLG00000020113	ddx56	99	49.283	Astatotilapia_calliptera
FBgn0001565	Hlc	98	49.911	ENSAMXG00000019357	ddx56	99	49.911	Astyanax_mexicanus
FBgn0001565	Hlc	89	49.407	ENSBTAG00000010602	DDX56	95	48.375	Bos_taurus
FBgn0001565	Hlc	94	37.770	WBGene00016073	C24H12.4	85	37.770	Caenorhabditis_elegans
FBgn0001565	Hlc	89	49.012	ENSCJAG00000012233	DDX56	92	49.012	Callithrix_jacchus
FBgn0001565	Hlc	73	48.049	ENSCAFG00000029295	DDX56	99	45.055	Canis_familiaris
FBgn0001565	Hlc	89	50.000	ENSCAFG00020019695	DDX56	92	49.899	Canis_lupus_dingo
FBgn0001565	Hlc	89	49.209	ENSCHIG00000014261	DDX56	98	46.909	Capra_hircus
FBgn0001565	Hlc	89	48.617	ENSTSYG00000008048	DDX56	98	46.727	Carlito_syrichta
FBgn0001565	Hlc	77	49.770	ENSCAPG00000006286	DDX56	90	49.770	Cavia_aperea
FBgn0001565	Hlc	90	50.491	ENSCPOG00000003359	DDX56	92	50.491	Cavia_porcellus
FBgn0001565	Hlc	89	48.617	ENSCCAG00000025303	DDX56	92	48.617	Cebus_capucinus
FBgn0001565	Hlc	89	49.209	ENSCATG00000039389	DDX56	92	49.209	Cercocebus_atys
FBgn0001565	Hlc	98	48.188	ENSCLAG00000007666	DDX56	99	48.188	Chinchilla_lanigera
FBgn0001565	Hlc	89	49.209	ENSCSAG00000015636	DDX56	92	49.209	Chlorocebus_sabaeus
FBgn0001565	Hlc	98	47.133	ENSCPBG00000024556	DDX56	99	47.133	Chrysemys_picta_bellii
FBgn0001565	Hlc	89	48.743	ENSCING00000005185	-	98	48.928	Ciona_intestinalis
FBgn0001565	Hlc	89	47.544	ENSCSAVG00000011266	-	99	47.741	Ciona_savignyi
FBgn0001565	Hlc	89	49.602	ENSCANG00000028187	DDX56	92	49.209	Colobus_angolensis_palliatus
FBgn0001565	Hlc	90	49.704	ENSCGRG00001019019	Ddx56	92	49.704	Cricetulus_griseus_chok1gshd
FBgn0001565	Hlc	90	49.704	ENSCGRG00000011870	Ddx56	92	49.704	Cricetulus_griseus_crigri
FBgn0001565	Hlc	90	51.845	ENSCSEG00000008368	ddx56	91	51.931	Cynoglossus_semilaevis
FBgn0001565	Hlc	95	51.020	ENSCVAG00000006499	ddx56	96	51.020	Cyprinodon_variegatus
FBgn0001565	Hlc	90	51.562	ENSDARG00000020913	ddx56	91	51.953	Danio_rerio
FBgn0001565	Hlc	76	48.492	ENSDNOG00000036526	DDX56	89	48.492	Dasypus_novemcinctus
FBgn0001565	Hlc	61	58.333	ENSETEG00000002969	-	63	58.333	Echinops_telfairi
FBgn0001565	Hlc	81	34.945	ENSETEG00000019559	-	96	34.945	Echinops_telfairi
FBgn0001565	Hlc	96	44.224	ENSEBUG00000009986	ddx56	99	44.585	Eptatretus_burgeri
FBgn0001565	Hlc	89	49.012	ENSEASG00005017795	DDX56	98	46.909	Equus_asinus_asinus
FBgn0001565	Hlc	89	49.012	ENSECAG00000019897	DDX56	98	46.909	Equus_caballus
FBgn0001565	Hlc	77	47.575	ENSEEUG00000004849	DDX56	91	47.575	Erinaceus_europaeus
FBgn0001565	Hlc	98	49.460	ENSELUG00000004150	ddx56	99	49.640	Esox_lucius
FBgn0001565	Hlc	89	51.195	ENSFCAG00000010261	DDX56	98	48.718	Felis_catus
FBgn0001565	Hlc	90	50.295	ENSFDAG00000007128	DDX56	96	48.609	Fukomys_damarensis
FBgn0001565	Hlc	91	51.845	ENSFHEG00000018008	ddx56	99	51.931	Fundulus_heteroclitus
FBgn0001565	Hlc	88	50.298	ENSGAFG00000006906	ddx56	93	50.000	Gambusia_affinis
FBgn0001565	Hlc	89	50.398	ENSGAGG00000006789	DDX56	89	50.398	Gopherus_agassizii
FBgn0001565	Hlc	89	49.605	ENSGGOG00000012031	DDX56	92	49.605	Gorilla_gorilla
FBgn0001565	Hlc	94	47.584	ENSHBUG00000015246	ddx56	92	48.842	Haplochromis_burtoni
FBgn0001565	Hlc	98	47.187	ENSHGLG00000017271	DDX56	99	47.187	Heterocephalus_glaber_female
FBgn0001565	Hlc	98	47.187	ENSHGLG00100015731	DDX56	99	47.187	Heterocephalus_glaber_male
FBgn0001565	Hlc	89	52.871	ENSHCOG00000001685	ddx56	91	52.871	Hippocampus_comes
FBgn0001565	Hlc	99	48.246	ENSIPUG00000006602	ddx56	98	48.421	Ictalurus_punctatus
FBgn0001565	Hlc	89	49.901	ENSSTOG00000000464	DDX56	92	49.901	Ictidomys_tridecemlineatus
FBgn0001565	Hlc	98	46.474	ENSJJAG00000014269	Ddx56	99	46.474	Jaculus_jaculus
FBgn0001565	Hlc	92	51.619	ENSKMAG00000016611	ddx56	99	51.619	Kryptolebias_marmoratus
FBgn0001565	Hlc	93	50.189	ENSLBEG00000026281	ddx56	93	50.379	Labrus_bergylta
FBgn0001565	Hlc	89	51.889	ENSLACG00000015551	DDX56	88	52.778	Latimeria_chalumnae
FBgn0001565	Hlc	94	50.372	ENSLOCG00000015185	ddx56	94	50.929	Lepisosteus_oculatus
FBgn0001565	Hlc	90	48.723	ENSLAFG00000018206	DDX56	92	48.723	Loxodonta_africana
FBgn0001565	Hlc	89	49.209	ENSMFAG00000041001	DDX56	92	49.209	Macaca_fascicularis
FBgn0001565	Hlc	89	49.209	ENSMMUG00000002645	DDX56	92	49.209	Macaca_mulatta
FBgn0001565	Hlc	89	49.209	ENSMNEG00000028492	DDX56	92	49.209	Macaca_nemestrina
FBgn0001565	Hlc	89	49.012	ENSMLEG00000043591	DDX56	92	49.012	Mandrillus_leucophaeus
FBgn0001565	Hlc	98	48.925	ENSMAMG00000007776	ddx56	99	49.553	Mastacembelus_armatus
FBgn0001565	Hlc	98	49.283	ENSMZEG00005009813	ddx56	99	49.283	Maylandia_zebra
FBgn0001565	Hlc	98	47.187	ENSMICG00000005550	DDX56	99	47.187	Microcebus_murinus
FBgn0001565	Hlc	90	49.803	ENSMOCG00000016782	Ddx56	92	49.803	Microtus_ochrogaster
FBgn0001565	Hlc	88	50.688	ENSMMOG00000009654	ddx56	95	51.479	Mola_mola
FBgn0001565	Hlc	89	45.908	ENSMODG00000016137	DDX56	89	45.908	Monodelphis_domestica
FBgn0001565	Hlc	66	50.133	ENSMALG00000016910	ddx56	99	50.133	Monopterus_albus
FBgn0001565	Hlc	90	49.803	MGP_CAROLIEiJ_G0016069	Ddx56	98	48.000	Mus_caroli
FBgn0001565	Hlc	94	48.037	ENSMUSG00000004393	Ddx56	98	47.200	Mus_musculus
FBgn0001565	Hlc	90	49.902	MGP_PahariEiJ_G0016822	Ddx56	99	47.200	Mus_pahari
FBgn0001565	Hlc	94	48.037	MGP_SPRETEiJ_G0016911	Ddx56	98	47.200	Mus_spretus
FBgn0001565	Hlc	89	50.593	ENSMPUG00000018196	DDX56	81	50.593	Mustela_putorius_furo
FBgn0001565	Hlc	89	49.012	ENSMLUG00000003509	DDX56	92	49.012	Myotis_lucifugus
FBgn0001565	Hlc	89	50.693	ENSNGAG00000018785	Ddx56	91	50.693	Nannospalax_galili
FBgn0001565	Hlc	94	48.393	ENSNBRG00000002656	ddx56	92	49.705	Neolamprologus_brichardi
FBgn0001565	Hlc	89	49.605	ENSNLEG00000003816	DDX56	92	49.605	Nomascus_leucogenys
FBgn0001565	Hlc	88	44.467	ENSMEUG00000006788	DDX56	99	44.467	Notamacropus_eugenii
FBgn0001565	Hlc	89	47.817	ENSOPRG00000000292	-	91	47.817	Ochotona_princeps
FBgn0001565	Hlc	66	50.269	ENSODEG00000014807	DDX56	99	50.269	Octodon_degus
FBgn0001565	Hlc	98	49.545	ENSONIG00000011509	ddx56	99	50.000	Oreochromis_niloticus
FBgn0001565	Hlc	67	43.421	ENSOANG00000015987	-	89	43.421	Ornithorhynchus_anatinus
FBgn0001565	Hlc	95	39.927	ENSOANG00000006320	-	99	40.110	Ornithorhynchus_anatinus
FBgn0001565	Hlc	89	48.221	ENSOCUG00000022918	DDX56	92	48.134	Oryctolagus_cuniculus
FBgn0001565	Hlc	96	51.107	ENSORLG00000001434	ddx56	96	51.107	Oryzias_latipes
FBgn0001565	Hlc	98	49.821	ENSORLG00020015718	ddx56	96	49.821	Oryzias_latipes_hni
FBgn0001565	Hlc	96	50.919	ENSORLG00015003004	ddx56	92	50.919	Oryzias_latipes_hsok
FBgn0001565	Hlc	96	50.738	ENSOMEG00000022072	ddx56	96	50.738	Oryzias_melastigma
FBgn0001565	Hlc	89	49.602	ENSOGAG00000009981	DDX56	91	49.801	Otolemur_garnettii
FBgn0001565	Hlc	89	49.407	ENSOARG00000015240	DDX56	95	47.758	Ovis_aries
FBgn0001565	Hlc	87	40.937	ENSPPAG00000031263	-	89	42.159	Pan_paniscus
FBgn0001565	Hlc	89	48.155	ENSPPAG00000029147	DDX56	92	48.155	Pan_paniscus
FBgn0001565	Hlc	89	50.395	ENSPPRG00000014594	DDX56	92	50.395	Panthera_pardus
FBgn0001565	Hlc	87	44.990	ENSPTIG00000019500	DDX56	98	42.964	Panthera_tigris_altaica
FBgn0001565	Hlc	84	41.090	ENSPTRG00000052765	-	91	42.348	Pan_troglodytes
FBgn0001565	Hlc	89	49.605	ENSPTRG00000019147	DDX56	92	49.605	Pan_troglodytes
FBgn0001565	Hlc	89	49.209	ENSPANG00000002446	DDX56	92	49.209	Papio_anubis
FBgn0001565	Hlc	96	50.184	ENSPKIG00000018998	ddx56	96	50.184	Paramormyrops_kingsleyae
FBgn0001565	Hlc	94	50.278	ENSPMGG00000017421	ddx56	99	50.278	Periophthalmus_magnuspinnatus
FBgn0001565	Hlc	89	49.307	ENSPCIG00000009336	DDX56	91	49.307	Phascolarctos_cinereus
FBgn0001565	Hlc	96	49.909	ENSPFOG00000018658	ddx56	97	49.909	Poecilia_formosa
FBgn0001565	Hlc	96	49.909	ENSPLAG00000019208	ddx56	97	49.909	Poecilia_latipinna
FBgn0001565	Hlc	96	50.091	ENSPMEG00000001775	ddx56	97	50.091	Poecilia_mexicana
FBgn0001565	Hlc	96	50.091	ENSPREG00000015142	ddx56	97	50.091	Poecilia_reticulata
FBgn0001565	Hlc	89	49.407	ENSPPYG00000017591	DDX56	92	49.407	Pongo_abelii
FBgn0001565	Hlc	86	48.049	ENSPCAG00000011499	DDX56	91	48.049	Procavia_capensis
FBgn0001565	Hlc	98	47.550	ENSPCOG00000024864	DDX56	99	47.550	Propithecus_coquereli
FBgn0001565	Hlc	78	49.528	ENSPVAG00000000791	DDX56	87	49.528	Pteropus_vampyrus
FBgn0001565	Hlc	98	49.104	ENSPNYG00000019212	ddx56	99	49.104	Pundamilia_nyererei
FBgn0001565	Hlc	95	49.360	ENSPNAG00000025446	ddx56	98	49.548	Pygocentrus_nattereri
FBgn0001565	Hlc	94	47.664	ENSRNOG00000004670	Ddx56	95	47.664	Rattus_norvegicus
FBgn0001565	Hlc	89	49.209	ENSRBIG00000030140	DDX56	92	49.209	Rhinopithecus_bieti
FBgn0001565	Hlc	89	49.402	ENSRROG00000044428	DDX56	92	49.012	Rhinopithecus_roxellana
FBgn0001565	Hlc	95	38.621	YLR276C	-	97	38.966	Saccharomyces_cerevisiae
FBgn0001565	Hlc	89	49.012	ENSSBOG00000034339	DDX56	92	49.012	Saimiri_boliviensis_boliviensis
FBgn0001565	Hlc	76	49.070	ENSSHAG00000016615	DDX56	89	49.070	Sarcophilus_harrisii
FBgn0001565	Hlc	99	49.374	ENSSFOG00015012795	ddx56	99	49.374	Scleropages_formosus
FBgn0001565	Hlc	90	51.362	ENSSMAG00000011280	ddx56	98	49.195	Scophthalmus_maximus
FBgn0001565	Hlc	90	53.502	ENSSDUG00000023597	ddx56	99	50.714	Seriola_dumerili
FBgn0001565	Hlc	90	53.307	ENSSLDG00000018369	ddx56	99	50.714	Seriola_lalandi_dorsalis
FBgn0001565	Hlc	68	61.017	ENSSARG00000014363	DDX56	79	60.000	Sorex_araneus
FBgn0001565	Hlc	99	47.509	ENSSPUG00000000784	DDX56	98	47.509	Sphenodon_punctatus
FBgn0001565	Hlc	90	52.529	ENSSPAG00000009392	ddx56	99	51.206	Stegastes_partitus
FBgn0001565	Hlc	91	48.944	ENSSSCG00000016745	DDX56	95	49.328	Sus_scrofa
FBgn0001565	Hlc	98	49.376	ENSTRUG00000018623	ddx56	99	49.376	Takifugu_rubripes
FBgn0001565	Hlc	98	49.470	ENSTNIG00000013593	ddx56	99	49.293	Tetraodon_nigroviridis
FBgn0001565	Hlc	89	49.209	ENSTBEG00000007119	DDX56	92	49.209	Tupaia_belangeri
FBgn0001565	Hlc	76	49.070	ENSTTRG00000010552	DDX56	90	49.070	Tursiops_truncatus
FBgn0001565	Hlc	89	50.000	ENSUAMG00000014194	DDX56	92	50.000	Ursus_americanus
FBgn0001565	Hlc	93	48.491	ENSUMAG00000009666	DDX56	92	50.000	Ursus_maritimus
FBgn0001565	Hlc	89	50.395	ENSVVUG00000011905	DDX56	98	47.818	Vulpes_vulpes
FBgn0001565	Hlc	89	52.362	ENSXETG00000019000	ddx56	91	52.183	Xenopus_tropicalis
FBgn0001565	Hlc	88	53.131	ENSXCOG00000017413	ddx56	92	53.131	Xiphophorus_couchianus
FBgn0001565	Hlc	96	50.273	ENSXMAG00000018749	ddx56	97	50.273	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0004004	ATP-dependent RNA helicase activity	10908586.	ISS	Function
GO:0005524	ATP binding	-	IEA	Function